FastQCFastQC Report
Mon 15 Aug 2016
SRR2920826_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920826_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences213548
Sequences flagged as poor quality0
Sequence length25
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCCCC402.7471472E-416.62514
TCCCCCC402.7471472E-416.62515
CTGTAGA500.00149217213.2999991
CCCCCCT600.005847573311.08333416
CATCCCC600.005847573311.08333413
GTCTGGA750.002631611210.1333331
TCCAGCA800.00448857769.52
TTGTTCT800.00448857769.54
AATATGG1600.00375002166.5312514
Produced by FastQC (version 0.11.5)