FastQCFastQC Report
Mon 15 Aug 2016
SRR2920826_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920826_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences213548
Sequences flagged as poor quality0
Sequence length25
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAATACC250.006015424619.04
GTGCTAG250.006015424619.01
TCCTAGA402.7471472E-416.6252
GTACATG400.00525939314.251
AACACCA500.00149217213.2999995
TCCAAGA655.409649E-513.1538462
GTCCAAG604.0663948E-412.6666671
CTGGGCA850.00739108968.9411769
AGCACTG850.00739108968.9411765
ATATGGC1050.004479598.14285815
AATATGG1050.004479598.14285814
Produced by FastQC (version 0.11.5)