##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920826_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 213548 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.08057673216326 33.0 33.0 34.0 32.0 34.0 2 33.1614765766947 33.0 33.0 34.0 32.0 35.0 3 33.38721036956562 34.0 33.0 34.0 32.0 35.0 4 33.45929720718527 34.0 33.0 34.0 32.0 35.0 5 33.357671343210896 34.0 33.0 34.0 32.0 35.0 6 36.05414707700376 37.0 37.0 37.0 33.0 37.0 7 36.027164852866804 37.0 37.0 37.0 34.0 37.0 8 35.987042725757206 37.0 37.0 37.0 33.0 37.0 9 35.959217599790215 37.0 37.0 37.0 33.0 37.0 10 35.94869069249068 37.0 37.0 37.0 33.0 37.0 11 35.86866652930489 37.0 35.0 37.0 33.0 37.0 12 35.83023957143125 37.0 35.0 37.0 33.0 37.0 13 37.52354037499766 38.0 38.0 38.0 37.0 38.0 14 37.54213104313784 38.0 38.0 38.0 37.0 38.0 15 37.524313035008525 38.0 38.0 38.0 37.0 38.0 16 37.511290201734504 38.0 38.0 38.0 37.0 38.0 17 37.448208365332384 38.0 38.0 38.0 37.0 38.0 18 37.4757103789312 38.0 38.0 38.0 37.0 38.0 19 37.48599846404555 38.0 38.0 38.0 37.0 38.0 20 37.484579579298334 38.0 38.0 38.0 37.0 38.0 21 37.46427969355836 38.0 38.0 38.0 37.0 38.0 22 37.47968606589619 38.0 38.0 38.0 37.0 38.0 23 38.16964804165808 39.0 38.0 39.0 37.0 39.0 24 38.16095678723285 39.0 38.0 39.0 37.0 39.0 25 38.0302601756982 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.0 22 5.0 23 9.0 24 17.0 25 98.0 26 165.0 27 351.0 28 589.0 29 968.0 30 1457.0 31 2019.0 32 2848.0 33 4035.0 34 6960.0 35 18411.0 36 125365.0 37 50249.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.47547155674603 18.011407271433118 12.22863243860865 26.284488733212207 2 17.25654185475865 20.011426002584898 37.85331635042239 24.878715792234065 3 19.22846385824264 23.576900743626723 28.841290950980575 28.353344447150054 4 13.665780058815816 17.047221233633657 36.40727143312043 32.8797272744301 5 14.677262254856052 35.5198831176129 34.18247888062637 15.620375746904678 6 32.619364264708636 34.96028995822953 18.248356341431435 14.171989435630397 7 28.544402195290992 29.974057354786748 22.683893082585648 18.797647367336616 8 25.574578080806187 34.841347144435915 20.896004645325643 18.68807012943226 9 25.915485043175305 16.220709161406337 19.86719613389027 37.99660966152808 10 15.475209320621126 27.703841759229775 33.361586153932606 23.459362766216493 11 35.031936613782385 21.451851574353306 24.49519545956881 19.021016352295504 12 24.069530035401876 23.384906437896866 30.455447955494787 22.09011557120647 13 28.679266488096356 21.13529510929627 25.499185194897635 24.68625320770974 14 22.895086818888494 20.106486597860904 26.075636390881673 30.922790192368925 15 24.30179631745556 28.122951280274222 22.68717103414689 24.888081368123327 16 24.767733717946317 26.30321988499073 24.85811152527769 24.070934871785266 17 23.665405435780247 26.039110644913556 26.339277352164387 23.956206567141813 18 23.619514113922865 26.394065971116564 26.48538033603686 23.501039578923706 19 24.805196021503363 25.87193511529024 25.84805289677262 23.474815966433777 20 24.666585498342293 26.089216475921106 25.885046921535203 23.3591511042014 21 24.370165021447168 25.575982917189577 25.62046940266357 24.433382658699685 22 24.331297881506732 25.814805102365746 25.64809785153689 24.20579916459063 23 24.239515237791974 25.587221608256694 25.86491093337329 24.308352220578044 24 24.076554217318822 26.03161818420215 25.848521175567086 24.043306422911943 25 24.546706126959748 25.404592878416093 25.718339670706353 24.330361323917806 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 1.0 2 3.0 3 5.0 4 5.0 5 5.0 6 15.0 7 25.0 8 25.0 9 25.0 10 95.5 11 166.0 12 166.0 13 166.0 14 290.5 15 415.0 16 415.0 17 415.0 18 861.0 19 1307.0 20 1307.0 21 1307.0 22 2248.5 23 3190.0 24 3190.0 25 3190.0 26 4779.0 27 6368.0 28 6368.0 29 6368.0 30 8489.0 31 10610.0 32 10610.0 33 10610.0 34 13137.0 35 15664.0 36 15664.0 37 15664.0 38 18457.0 39 21250.0 40 21250.0 41 21250.0 42 23669.5 43 26089.0 44 26089.0 45 26089.0 46 27525.5 47 28962.0 48 28962.0 49 28962.0 50 28953.0 51 28944.0 52 28944.0 53 28944.0 54 27249.5 55 25555.0 56 25555.0 57 25555.0 58 22538.5 59 19522.0 60 19522.0 61 19522.0 62 16503.0 63 13484.0 64 13484.0 65 13484.0 66 10378.0 67 7272.0 68 7272.0 69 7272.0 70 5182.0 71 3092.0 72 3092.0 73 3092.0 74 2146.5 75 1201.0 76 1201.0 77 1201.0 78 760.0 79 319.0 80 319.0 81 319.0 82 202.0 83 85.0 84 85.0 85 85.0 86 52.5 87 20.0 88 20.0 89 20.0 90 10.5 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 213548.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.83978625268023 #Duplication Level Percentage of deduplicated Percentage of total 1 93.31577932262563 79.16890771733836 2 3.7169936130804415 6.306978872726446 3 1.179821330517192 3.0028736849229407 4 0.5868149489119461 1.9914101934226789 5 0.338552514379992 1.4361361477652985 6 0.21386159626853038 1.0886383269047468 7 0.12933123686468226 0.7680704143976078 8 0.09230344376424361 0.6264803551475774 9 0.06829971242845903 0.5215079703194992 >10 0.3489076255661236 4.574228696655693 >50 0.008751239618183105 0.4642807960907852 >100 5.834159745455403E-4 0.05048682430837963 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.6827879446307153E-4 0.0 4 0.0 0.0 0.0 4.6827879446307153E-4 0.0 5 0.0 0.0 0.0 4.6827879446307153E-4 0.0 6 0.0 0.0 0.0 4.6827879446307153E-4 0.0 7 0.0 0.0 0.0 4.6827879446307153E-4 0.0 8 0.0 0.0 0.0 4.6827879446307153E-4 0.0 9 0.0 0.0 0.0 4.6827879446307153E-4 0.0 10 0.0 0.0 0.0 4.6827879446307153E-4 0.0 11 0.0 0.0 0.0 4.6827879446307153E-4 0.0 12 0.0 0.0 0.0 4.6827879446307153E-4 0.0 13 0.0 0.0 0.0 4.6827879446307153E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACC 25 0.0060154246 19.0 4 GTGCTAG 25 0.0060154246 19.0 1 TCCTAGA 40 2.7471472E-4 16.625 2 GTACATG 40 0.005259393 14.25 1 AACACCA 50 0.001492172 13.299999 5 TCCAAGA 65 5.409649E-5 13.153846 2 GTCCAAG 60 4.0663948E-4 12.666667 1 CTGGGCA 85 0.0073910896 8.941176 9 AGCACTG 85 0.0073910896 8.941176 5 ATATGGC 105 0.00447959 8.142858 15 AATATGG 105 0.00447959 8.142858 14 >>END_MODULE