##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920825_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 144024 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.03368188635228 33.0 33.0 34.0 32.0 34.0 2 33.14401072043548 33.0 33.0 34.0 32.0 34.0 3 33.282286285619065 34.0 33.0 34.0 32.0 35.0 4 33.362022996167305 34.0 33.0 34.0 32.0 35.0 5 33.241286174526465 34.0 33.0 34.0 32.0 35.0 6 35.91545853468866 37.0 37.0 37.0 33.0 37.0 7 35.941252846747766 37.0 37.0 37.0 33.0 37.0 8 35.88617174915292 37.0 37.0 37.0 33.0 37.0 9 35.870125812364606 37.0 35.0 37.0 33.0 37.0 10 35.85847497639282 37.0 35.0 37.0 33.0 37.0 11 35.7670179970005 37.0 35.0 37.0 33.0 37.0 12 35.73955729600622 37.0 35.0 37.0 33.0 37.0 13 37.49323723823807 38.0 38.0 38.0 37.0 38.0 14 37.52488474143198 38.0 38.0 38.0 37.0 38.0 15 37.52285730156085 38.0 38.0 38.0 37.0 38.0 16 37.49791701383103 38.0 38.0 38.0 37.0 38.0 17 37.41753457757041 38.0 38.0 38.0 37.0 38.0 18 37.45552824529245 38.0 38.0 38.0 37.0 38.0 19 37.45272315725157 38.0 38.0 38.0 37.0 38.0 20 37.46152724545909 38.0 38.0 38.0 37.0 38.0 21 37.456569738376935 38.0 38.0 38.0 37.0 38.0 22 37.462020218852416 38.0 38.0 38.0 37.0 38.0 23 38.14628117535966 39.0 38.0 39.0 37.0 39.0 24 38.13729656168417 39.0 38.0 39.0 37.0 39.0 25 38.010727378770206 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 1.0 22 0.0 23 5.0 24 23.0 25 47.0 26 105.0 27 215.0 28 402.0 29 678.0 30 1018.0 31 1412.0 32 1993.0 33 2879.0 34 4897.0 35 14072.0 36 88444.0 37 27833.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.6246736655002 17.513747708715215 12.48819641170916 26.37338221407543 2 18.253902127423206 19.51341443092818 36.20715991779148 26.025523523857135 3 19.73143364994723 22.766344498139198 28.489001833027828 29.013220018885743 4 14.215686274509803 16.293117813697716 34.86224518135867 34.628950730433814 5 15.08498583569405 34.89071265900128 32.75218019219019 17.27212131311448 6 34.15472421263123 33.756179525634614 17.368633005610175 14.720463256123981 7 29.13681053157807 29.822112981169806 21.878992390157194 19.16208409709493 8 26.91356996056213 33.842970616008444 19.898072543464977 19.345386879964448 9 26.385880131089262 16.1611953563295 19.132227962006333 38.32069655057491 10 16.42504027106593 26.95731267011054 32.405015830694886 24.212631228128643 11 35.83430539354552 21.10481586402266 23.714103205021388 19.346775537410434 12 24.629228461923013 22.84549797256013 29.313170027217684 23.21210353829917 13 28.725073598844634 20.473671054824198 25.512414597567073 25.288840748764095 14 24.036271732489027 19.56201744153752 24.870854857523746 31.5308559684497 15 24.936816086207855 27.473198911292563 21.969949452868967 25.620035549630614 16 25.345081375326334 25.356190634894183 24.441759706715548 24.856968283063935 17 24.984030439371217 25.151363661611953 24.984030439371217 24.880575459645616 18 24.80628228628562 25.854024329278452 25.05762928400822 24.282064100427707 19 25.452702327389883 25.165944564794756 25.116647225462422 24.264705882352942 20 25.50894295395212 25.42215186357829 24.595206354496472 24.473698827973113 21 25.1180358829084 25.134005443537188 24.895156362828416 24.85280231072599 22 24.89585069155141 24.98819641170916 25.09720602121869 25.018746875520748 23 24.95209131811365 24.43412209076265 25.108315280786535 25.505471310337164 24 24.61117591512526 25.72626784424818 24.894462034105427 24.768094206521134 25 25.052074654224292 24.767399877798145 25.09442870632672 25.086096761650833 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 1.5 3 3.0 4 3.0 5 3.0 6 9.0 7 15.0 8 15.0 9 15.0 10 60.5 11 106.0 12 106.0 13 106.0 14 188.0 15 270.0 16 270.0 17 270.0 18 532.0 19 794.0 20 794.0 21 794.0 22 1227.0 23 1660.0 24 1660.0 25 1660.0 26 2493.0 27 3326.0 28 3326.0 29 3326.0 30 4393.5 31 5461.0 32 5461.0 33 5461.0 34 6778.5 35 8096.0 36 8096.0 37 8096.0 38 10263.0 39 12430.0 40 12430.0 41 12430.0 42 14379.0 43 16328.0 44 16328.0 45 16328.0 46 17976.0 47 19624.0 48 19624.0 49 19624.0 50 20034.5 51 20445.0 52 20445.0 53 20445.0 54 20073.5 55 19702.0 56 19702.0 57 19702.0 58 17686.0 59 15670.0 60 15670.0 61 15670.0 62 13174.5 63 10679.0 64 10679.0 65 10679.0 66 8234.0 67 5789.0 68 5789.0 69 5789.0 70 4136.5 71 2484.0 72 2484.0 73 2484.0 74 1662.0 75 840.0 76 840.0 77 840.0 78 539.5 79 239.0 80 239.0 81 239.0 82 144.0 83 49.0 84 49.0 85 49.0 86 29.5 87 10.0 88 10.0 89 10.0 90 7.0 91 4.0 92 4.0 93 4.0 94 2.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 144024.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.34710881519746 #Duplication Level Percentage of deduplicated Percentage of total 1 82.60340632603406 55.63100594345387 2 8.947791661511815 12.052157973671054 3 3.2753927997030807 6.61764705882353 4 1.7330611571611203 4.668666333388879 5 0.9155016701719658 3.08281953007832 6 0.6474493793558497 2.6162306282286285 7 0.4371314281001278 2.0607676498361385 8 0.32372468967792484 1.7441537521524193 9 0.1948533960163306 1.1810531578070322 >10 0.9041609963297454 9.467172137977004 >50 0.01443358489009856 0.6339221240904294 >100 0.0030929110478782633 0.24440371049269566 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGAG 25 0.0060061193 19.0 11 CAGGACA 40 0.0052483873 14.25 4 GCATGCC 40 0.0052483873 14.25 13 >>END_MODULE