FastQCFastQC Report
Mon 15 Aug 2016
SRR2920824_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920824_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119421
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACATACC250.006000236619.04
TGCCGGT250.006000236619.019
CATACCA307.6658186E-418.9999985
CACATAC350.002154461316.2857153
CCAGAAC400.00524143214.253
TCCAGAA1200.00166238877.9166662
Produced by FastQC (version 0.11.5)