FastQCFastQC Report
Mon 15 Aug 2016
SRR2920824_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920824_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119421
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGACAAG402.7344318E-416.6251
AGCCCAG400.00524143214.2513
ATCCCCC500.001485457513.29999914
CCCCCTG500.001485457513.29999917
CCCCCCT500.001485457513.29999916
TCCCCCC500.001485457513.29999915
CATCCCC500.001485457513.29999913
CTGGGCC604.04309E-412.6666669
TACACAG604.04309E-412.6666665
Produced by FastQC (version 0.11.5)