##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920824_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 119421 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.07218160959965 33.0 33.0 34.0 32.0 34.0 2 33.18617328610546 33.0 33.0 34.0 32.0 34.0 3 33.318729536681154 34.0 33.0 34.0 32.0 35.0 4 33.40837038711784 34.0 33.0 34.0 32.0 35.0 5 33.28093886334899 34.0 33.0 34.0 32.0 35.0 6 35.92960199629881 37.0 37.0 37.0 33.0 37.0 7 35.965734669781696 37.0 37.0 37.0 33.0 37.0 8 35.904790614716006 37.0 37.0 37.0 33.0 37.0 9 35.883831151974945 37.0 35.0 37.0 33.0 37.0 10 35.90098056455732 37.0 35.0 37.0 33.0 37.0 11 35.79705411945972 37.0 35.0 37.0 33.0 37.0 12 35.77715812126846 37.0 35.0 37.0 33.0 37.0 13 37.5220606091056 38.0 38.0 38.0 37.0 38.0 14 37.540340476130666 38.0 38.0 38.0 37.0 38.0 15 37.54198172850671 38.0 38.0 38.0 37.0 38.0 16 37.50787549928405 38.0 38.0 38.0 37.0 38.0 17 37.45238274675308 38.0 38.0 38.0 37.0 38.0 18 37.48003282504752 38.0 38.0 38.0 37.0 38.0 19 37.4891350767453 38.0 38.0 38.0 37.0 38.0 20 37.4821011379908 38.0 38.0 38.0 37.0 38.0 21 37.4662747757932 38.0 38.0 38.0 37.0 38.0 22 37.49247619765368 38.0 38.0 38.0 37.0 38.0 23 38.16551527788245 39.0 38.0 39.0 37.0 39.0 24 38.17157786318989 39.0 38.0 39.0 37.0 39.0 25 38.03604056238015 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 0.0 21 1.0 22 4.0 23 6.0 24 25.0 25 50.0 26 91.0 27 158.0 28 324.0 29 509.0 30 755.0 31 1116.0 32 1613.0 33 2323.0 34 3900.0 35 11341.0 36 72676.0 37 24528.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49151321794324 17.804238785473242 12.307718073035732 26.396529923547785 2 18.130814513360296 19.752807295199336 36.30684720442803 25.809530987012337 3 19.547650748193366 23.24381808894583 28.592123663342296 28.61640749951851 4 13.995863374113432 16.585022734694903 34.714162500732705 34.704951390458966 5 14.763735021478636 35.16801902512958 32.94646670183636 17.12177925155542 6 33.616365630835446 33.99820802036493 17.502784267423653 14.882642081375971 7 28.822401420185727 30.052503328560302 21.941702045703853 19.18339320555011 8 26.594987481263765 34.26030597633582 19.89683556493414 19.247870977466274 9 26.139456209544388 16.464440927475067 19.534252769613385 37.86185009336716 10 16.173034893360462 27.01618643287194 32.73042429723416 24.080354376533442 11 35.60261595531774 21.420018254745816 23.63738370973279 19.33998208020365 12 24.429539193274213 23.12742315003224 29.22852764589143 23.21451001080212 13 28.242101472940266 21.136985957243702 25.56418050426642 25.056732065549607 14 23.542760486011673 19.5962184205458 25.1371199370295 31.723901156413024 15 24.72680684301756 27.4491086157376 22.388022207149497 25.436062334095343 16 25.0290987347284 25.709046147662473 24.581941199621507 24.679913917987623 17 24.716758359082576 25.318830021520505 25.13795731069075 24.826454308706175 18 24.567705847380278 25.829627954882305 25.569204746233915 24.033461451503506 19 25.246815886653103 25.287009822393046 25.412615871580375 24.053558419373477 20 25.33474012108423 25.621959286892594 24.81556845110994 24.22773214091324 21 24.63971998224768 25.360698704582944 25.08017852806458 24.919402785104797 22 24.49234221786788 25.311293658569262 25.15972902588322 25.03663509767964 23 24.712571490776327 24.67405230235888 25.390006782726655 25.22336942413813 24 24.434563435241706 25.808693613351085 25.178988620091943 24.577754331315262 25 25.08185327538708 24.93866237931352 25.282822954086804 24.6966613912126 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.5 3 1.0 4 1.0 5 1.0 6 20.5 7 40.0 8 40.0 9 40.0 10 90.5 11 141.0 12 141.0 13 141.0 14 217.0 15 293.0 16 293.0 17 293.0 18 564.0 19 835.0 20 835.0 21 835.0 22 1252.5 23 1670.0 24 1670.0 25 1670.0 26 2270.0 27 2870.0 28 2870.0 29 2870.0 30 3809.5 31 4749.0 32 4749.0 33 4749.0 34 5883.5 35 7018.0 36 7018.0 37 7018.0 38 8832.0 39 10646.0 40 10646.0 41 10646.0 42 12208.0 43 13770.0 44 13770.0 45 13770.0 46 14920.5 47 16071.0 48 16071.0 49 16071.0 50 16304.5 51 16538.0 52 16538.0 53 16538.0 54 16257.5 55 15977.0 56 15977.0 57 15977.0 58 14292.5 59 12608.0 60 12608.0 61 12608.0 62 10538.5 63 8469.0 64 8469.0 65 8469.0 66 6598.0 67 4727.0 68 4727.0 69 4727.0 70 3373.5 71 2020.0 72 2020.0 73 2020.0 74 1366.0 75 712.0 76 712.0 77 712.0 78 464.5 79 217.0 80 217.0 81 217.0 82 127.0 83 37.0 84 37.0 85 37.0 86 23.5 87 10.0 88 10.0 89 10.0 90 5.5 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 119421.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.93141072340711 #Duplication Level Percentage of deduplicated Percentage of total 1 84.3543036584934 59.83369759087598 2 8.388917090677275 11.900754473668785 3 2.9218364479913115 6.217499434772779 4 1.4579668740481897 4.136625886569364 5 0.8275585252694583 2.934994682677251 6 0.5371456904388067 2.286030095209385 7 0.3541619936959165 1.7584846886226042 8 0.2361079957972777 1.3397978579981744 9 0.17471991688998548 1.1153817167834803 >10 0.7366569468875064 7.956724529186659 >50 0.010624859810877496 0.5200090436355415 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACAAG 40 2.7344318E-4 16.625 1 AGCCCAG 40 0.005241432 14.25 13 ATCCCCC 50 0.0014854575 13.299999 14 CCCCCTG 50 0.0014854575 13.299999 17 CCCCCCT 50 0.0014854575 13.299999 16 TCCCCCC 50 0.0014854575 13.299999 15 CATCCCC 50 0.0014854575 13.299999 13 CTGGGCC 60 4.04309E-4 12.666666 9 TACACAG 60 4.04309E-4 12.666666 5 >>END_MODULE