FastQCFastQC Report
Mon 15 Aug 2016
SRR2920822_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920822_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116183
Sequences flagged as poor quality0
Sequence length25
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGAGG250.005999272719.03
ACAATGG250.005999272719.03
TAGAGGT350.002153984716.2857154
ACATGGG350.002153984716.2857153
CCTAGAG500.001485031813.2999992
CCCTAGA600.005820383311.0833331
ACACCTT600.005820383311.0833336
Produced by FastQC (version 0.11.5)