##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920819_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 53650 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.964827586206894 33.0 32.0 34.0 32.0 34.0 2 33.03616029822926 33.0 33.0 34.0 32.0 34.0 3 33.269170549860206 34.0 33.0 34.0 32.0 35.0 4 33.32775396085741 34.0 33.0 34.0 32.0 35.0 5 33.21444547996272 34.0 33.0 34.0 32.0 35.0 6 36.03287977632805 37.0 37.0 37.0 33.0 37.0 7 36.00626281453868 37.0 37.0 37.0 33.0 37.0 8 35.923355079217146 37.0 37.0 37.0 33.0 37.0 9 35.92244175209692 37.0 37.0 37.0 33.0 37.0 10 35.90948741845293 37.0 37.0 37.0 33.0 37.0 11 35.85537744641193 37.0 35.0 37.0 33.0 37.0 12 35.830158434296365 37.0 35.0 37.0 33.0 37.0 13 37.462758620689655 38.0 38.0 38.0 37.0 38.0 14 37.485181733457594 38.0 38.0 38.0 37.0 38.0 15 37.47183597390494 38.0 38.0 38.0 37.0 38.0 16 37.45696178937558 38.0 38.0 38.0 37.0 38.0 17 37.39342031686859 38.0 38.0 38.0 37.0 38.0 18 37.433830382106244 38.0 38.0 38.0 37.0 38.0 19 37.418900279589934 38.0 38.0 38.0 37.0 38.0 20 37.41558247903075 38.0 38.0 38.0 37.0 38.0 21 37.411332712022364 38.0 38.0 38.0 37.0 38.0 22 37.431761416589005 38.0 38.0 38.0 37.0 38.0 23 38.121640260950606 39.0 38.0 39.0 37.0 39.0 24 38.128667287977635 39.0 38.0 39.0 37.0 39.0 25 37.985219012115564 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 0.0 21 1.0 22 2.0 23 3.0 24 8.0 25 22.0 26 41.0 27 90.0 28 149.0 29 259.0 30 370.0 31 572.0 32 758.0 33 1142.0 34 1961.0 35 5134.0 36 32224.0 37 10913.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.34855545200373 18.93942218080149 12.421248835041938 26.290773532152844 2 17.269338303821062 20.479030754892825 37.847157502329914 24.4044734389562 3 18.736253494874184 23.945945945945944 31.017707362534946 26.30009319664492 4 12.684063373718546 18.262814538676608 36.98229263746505 32.07082945013979 5 12.093196644920782 35.15750232991613 33.444547996272135 19.304753028890957 6 30.14538676607642 36.19198508853681 19.399813606710158 14.262814538676608 7 26.44547996272134 31.06430568499534 23.15377446411929 19.336439888164026 8 25.58807082945014 35.338303821062446 20.881640260950608 18.191985088536814 9 25.301025163094128 17.46877912395154 21.364398881640263 35.86579683131407 10 15.616029822926375 27.841565703634668 34.2143522833178 22.328052190121156 11 33.222739981360675 20.687791239515377 26.823858341099722 19.26561043802423 12 23.589934762348555 24.1547064305685 31.903075489282383 20.35228331780056 13 27.161230195712953 22.14165890027959 27.088536812674747 23.608574091332713 14 22.75489282385834 21.80242311276794 25.796831314072694 29.645852749301028 15 22.868592730661696 29.81174277726002 23.170549860205032 24.149114631873253 16 22.85927306616962 27.526561043802424 26.93010251630941 22.684063373718548 17 23.54333643988816 26.18825722273998 26.874184529356942 23.394221808014912 18 22.436160298229264 27.483690587138867 28.11183597390494 21.968313140726934 19 24.713886300093197 25.47064305684995 26.821994408201306 22.993476234855546 20 24.059645852749302 27.21901211556384 26.225535880708296 22.495806150978563 21 22.93942218080149 26.749301025163092 26.521901211556383 23.789375582479032 22 22.40633737185461 27.623485554520038 27.448275862068964 22.521901211556383 23 23.056849953401677 26.3336439888164 26.939422180801493 23.67008387698043 24 22.417520969245107 27.260018639328987 27.712954333643992 22.60950605778192 25 23.274930102516308 26.320596458527497 27.53774464119292 22.86672879776328 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.0 2 1.5 3 1.0 4 1.0 5 1.0 6 9.5 7 18.0 8 18.0 9 18.0 10 61.5 11 105.0 12 105.0 13 105.0 14 149.0 15 193.0 16 193.0 17 193.0 18 322.0 19 451.0 20 451.0 21 451.0 22 785.5 23 1120.0 24 1120.0 25 1120.0 26 1658.5 27 2197.0 28 2197.0 29 2197.0 30 2987.5 31 3778.0 32 3778.0 33 3778.0 34 4237.0 35 4696.0 36 4696.0 37 4696.0 38 5342.0 39 5988.0 40 5988.0 41 5988.0 42 6337.0 43 6686.0 44 6686.0 45 6686.0 46 6752.5 47 6819.0 48 6819.0 49 6819.0 50 6534.5 51 6250.0 52 6250.0 53 6250.0 54 5829.5 55 5409.0 56 5409.0 57 5409.0 58 4843.0 59 4277.0 60 4277.0 61 4277.0 62 3702.5 63 3128.0 64 3128.0 65 3128.0 66 2387.0 67 1646.0 68 1646.0 69 1646.0 70 1119.0 71 592.0 72 592.0 73 592.0 74 405.5 75 219.0 76 219.0 77 219.0 78 136.5 79 54.0 80 54.0 81 54.0 82 34.5 83 15.0 84 15.0 85 15.0 86 10.0 87 5.0 88 5.0 89 5.0 90 3.0 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 53650.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.04846225535881 #Duplication Level Percentage of deduplicated Percentage of total 1 90.4321706328878 72.38956197576887 2 5.839891957341778 9.349487418452936 3 1.6741955013272483 4.020503261882572 4 0.7078656917990034 2.266542404473439 5 0.3655753737251432 1.4631873252562908 6 0.22819354538257344 1.0959925442684064 7 0.14436734503795465 0.8089468779123952 8 0.11176826712615844 0.7157502329916122 9 0.06752666138872072 0.48648648648648646 >10 0.39817445163693943 5.949673811742777 >50 0.03027057234666791 1.4538676607642125 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGAAGGACCTGGAATATGGCGAGA 71 0.13233923578751167 No Hit GTCCTTCAGTGTGCATTTCTCATTT 69 0.12861136999068032 No Hit GGACAAGGAGGGCATCCCCCCTGAC 66 0.12301957129543337 No Hit GATATACACTGTTCTACAAATCCCG 65 0.12115563839701769 No Hit CCCTAGAGGTGGAGCCCAGTGACAC 64 0.11929170549860205 No Hit CTGTAGGACCTGGAATATGGCGAGA 64 0.11929170549860205 No Hit CCCTCTCTGATTACAACATCCAGAA 62 0.11556383970177074 No Hit CTCTCAGGCGAAGGACCAGGTGCAG 58 0.10810810810810811 No Hit AGTCCACCCTGCACCTGGTCCTTCG 55 0.10251630941286113 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTGACA 30 7.5907505E-4 19.0 18 GCCCAGT 45 3.4373013E-5 16.88889 14 GAGGTGG 35 0.0021336984 16.285715 6 GTGACAC 35 0.0021336984 16.285715 19 GAGCCCA 45 6.613065E-4 14.777779 12 GGTGGAG 40 0.005191727 14.25 8 CAGTGAC 40 0.005191727 14.25 17 GGAGCCC 40 0.005191727 14.25 11 AGCCCAG 50 0.0014669098 13.299999 13 TATGGCG 85 5.1042905E-5 11.17647 16 CTGGAAT 60 0.005751345 11.083334 10 TGGCGAG 90 9.127852E-5 10.555556 18 ATGGCGA 95 1.5777622E-4 10.0 17 ATATGGC 120 1.6810358E-4 8.708334 15 AATATGG 130 3.9927382E-4 8.038462 14 >>END_MODULE