##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920818_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 160848 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.375248681985475 32.0 32.0 33.0 29.0 34.0 2 31.749496418979408 33.0 32.0 33.0 29.0 34.0 3 31.93071098179648 33.0 32.0 33.0 30.0 34.0 4 32.01595294936835 33.0 32.0 33.0 31.0 34.0 5 32.00452601213568 33.0 32.0 33.0 31.0 34.0 6 35.36389013229881 37.0 34.0 37.0 33.0 37.0 7 35.389417338108025 37.0 35.0 37.0 33.0 37.0 8 35.34688650154183 37.0 34.0 37.0 33.0 37.0 9 35.44284666268776 37.0 34.0 37.0 33.0 37.0 10 35.41142569382274 37.0 34.0 37.0 33.0 37.0 11 35.36495946483637 37.0 34.0 37.0 33.0 37.0 12 35.36790634636427 37.0 34.0 37.0 33.0 37.0 13 37.06733686461753 38.0 38.0 38.0 37.0 38.0 14 37.05544364866209 38.0 38.0 38.0 37.0 38.0 15 36.99573510394907 38.0 38.0 38.0 36.0 38.0 16 37.02512931463245 38.0 38.0 38.0 36.0 38.0 17 37.02903362180444 38.0 38.0 38.0 36.0 38.0 18 37.03991967571869 38.0 38.0 38.0 36.0 38.0 19 37.006503033920225 38.0 38.0 38.0 36.0 38.0 20 37.040472993136376 38.0 38.0 38.0 37.0 38.0 21 37.0629041082264 38.0 38.0 38.0 37.0 38.0 22 37.09941062369442 38.0 38.0 38.0 37.0 38.0 23 37.64952004376803 39.0 38.0 39.0 37.0 39.0 24 37.55839674723963 39.0 38.0 39.0 36.0 39.0 25 37.45252039192281 39.0 38.0 39.0 36.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 9.0 19 17.0 20 64.0 21 126.0 22 191.0 23 329.0 24 454.0 25 691.0 26 882.0 27 1016.0 28 1329.0 29 1559.0 30 1971.0 31 2484.0 32 3234.0 33 4674.0 34 8803.0 35 26151.0 36 99306.0 37 7556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.2812344573759 17.89639908485029 11.89135084054511 26.931015617228688 2 17.571247388839154 19.397194867203822 37.0648065254153 25.966751218541727 3 19.472421167810605 22.723938127922015 29.17474883119467 28.628891873072714 4 13.740301402566399 16.04309658808316 35.53603401969561 34.68056798965483 5 14.537948870983787 34.97525614244504 33.66905401372725 16.81774097284393 6 33.92581816373222 33.81328956530389 17.555704764746842 14.70518750621705 7 28.58350741072317 29.98172187406744 22.083582015318807 19.351188699890578 8 26.277603700387942 33.97741967571869 20.67479856759176 19.0701780563016 9 26.11782552471899 15.947975728638216 19.357405749527505 38.57679299711529 10 15.93367651447329 26.728961504028646 33.38804337013826 23.949318611359793 11 35.51427434596638 20.915398388540734 24.35218342783249 19.2181438376604 12 24.380160151198645 22.979458867999604 30.10917139162439 22.531209589177358 13 28.694170894260417 20.608897841440367 25.385457077489303 25.311474186809907 14 23.423356212075998 19.929996021088233 25.18464637421665 31.462001392619122 15 24.477146125534667 28.004700089525514 22.273823734208694 25.244330050731122 16 25.11936735302895 25.876603998806324 24.365239232070028 24.638789416094696 17 24.2527106336417 25.45695314831394 25.868521834278326 24.42181438376604 18 24.113448721774596 26.047572863821745 26.06622401273252 23.772754401671143 19 25.32701681090222 25.366805928578533 25.277280413806825 24.028896846712424 20 25.226922311747735 25.540883318412416 25.242464935840047 23.989729433999802 21 24.355913657614643 25.201432408236347 25.32950363075699 25.113150303392022 22 24.69536456779071 25.357480354123147 25.144235551576642 24.802919526509502 23 24.63381577638516 24.730180045757486 25.437058589475782 25.198945588381576 24 24.64127623594947 25.564508107032722 25.530936038993335 24.26327961802447 25 25.065279021187703 24.989431015617228 25.50420272555456 24.441087237640506 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 3.0 3 6.0 4 6.0 5 6.0 6 21.0 7 36.0 8 36.0 9 36.0 10 84.0 11 132.0 12 132.0 13 132.0 14 271.5 15 411.0 16 411.0 17 411.0 18 685.0 19 959.0 20 959.0 21 959.0 22 1661.0 23 2363.0 24 2363.0 25 2363.0 26 3310.5 27 4258.0 28 4258.0 29 4258.0 30 5704.0 31 7150.0 32 7150.0 33 7150.0 34 8594.0 35 10038.0 36 10038.0 37 10038.0 38 12090.5 39 14143.0 40 14143.0 41 14143.0 42 16228.5 43 18314.0 44 18314.0 45 18314.0 46 19738.5 47 21163.0 48 21163.0 49 21163.0 50 21977.5 51 22792.0 52 22792.0 53 22792.0 54 21832.5 55 20873.0 56 20873.0 57 20873.0 58 18611.5 59 16350.0 60 16350.0 61 16350.0 62 13855.5 63 11361.0 64 11361.0 65 11361.0 66 8868.5 67 6376.0 68 6376.0 69 6376.0 70 4561.0 71 2746.0 72 2746.0 73 2746.0 74 1876.0 75 1006.0 76 1006.0 77 1006.0 78 643.0 79 280.0 80 280.0 81 280.0 82 178.5 83 77.0 84 77.0 85 77.0 86 44.5 87 12.0 88 12.0 89 12.0 90 7.0 91 2.0 92 2.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 160848.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.292370370406 #Duplication Level Percentage of deduplicated Percentage of total 1 83.5313243191618 56.210208136155394 2 8.487696858436825 11.42314481179325 3 3.0685737147578935 6.194747967671423 4 1.6006309981853217 4.308410158249574 5 0.8921391723574988 3.001707980411415 6 0.5564566588093101 2.2467172547804846 7 0.43357611751244857 2.0423455278387257 8 0.2727333295104384 1.4682297777416322 9 0.18881537944051174 1.1435251000445694 >10 0.9350856872155944 10.357607988831749 >50 0.029970695102135483 1.3707511318768713 >100 0.0029970695102135483 0.23260416460490313 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTCAG 25 0.0060091047 19.0 1 TCAGAAC 45 6.7158113E-4 14.777778 3 CTCAAGA 40 0.005251917 14.25 2 CTGACCA 40 0.005251917 14.25 4 CTGAAGT 55 0.0030479275 12.090909 4 GATGCCC 55 0.0030479275 12.090909 11 GCTCAAG 55 0.0030479275 12.090909 1 GGACAGT 75 0.0026255648 10.133334 6 CTTCTGG 95 0.0018050281 9.0 1 TAGAACA 85 0.0073745484 8.941176 4 AGAACAG 85 0.0073745484 8.941176 5 AATATGG 125 0.0024949836 7.6 14 >>END_MODULE