FastQCFastQC Report
Mon 15 Aug 2016
SRR2920817_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920817_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66127
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGAGA350.002140783216.28571519
TGGCGAG500.001473233313.29999918
ATGGCGA550.003015357812.09090917
TATGGCG550.003015357812.09090916
Produced by FastQC (version 0.11.5)