##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920816_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 270899 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3630799670726 32.0 32.0 33.0 29.0 34.0 2 31.739253374874032 33.0 32.0 33.0 29.0 34.0 3 31.85322574095881 33.0 32.0 34.0 30.0 34.0 4 31.968744808950937 33.0 32.0 34.0 31.0 34.0 5 32.005031395464734 33.0 32.0 34.0 31.0 34.0 6 34.94685104042466 37.0 34.0 37.0 32.0 37.0 7 34.88792871143858 37.0 34.0 37.0 32.0 37.0 8 34.7446022318281 37.0 34.0 37.0 32.0 37.0 9 34.9577591648548 37.0 34.0 37.0 32.0 37.0 10 34.944248594494624 37.0 34.0 37.0 32.0 37.0 11 34.891753014961296 37.0 34.0 37.0 32.0 37.0 12 34.908748278878846 37.0 34.0 37.0 32.0 37.0 13 36.596192676975555 38.0 38.0 38.0 34.0 38.0 14 36.59133846931882 38.0 38.0 38.0 34.0 38.0 15 36.51336106814717 38.0 38.0 38.0 34.0 38.0 16 36.558503353648405 38.0 38.0 38.0 34.0 38.0 17 36.56730737285852 38.0 38.0 38.0 34.0 38.0 18 36.578872568743336 38.0 38.0 38.0 34.0 38.0 19 36.55319141082101 38.0 38.0 38.0 34.0 38.0 20 36.59149350865083 38.0 38.0 38.0 34.0 38.0 21 36.62510382098125 38.0 38.0 38.0 34.0 38.0 22 36.654967349454964 38.0 38.0 38.0 34.0 38.0 23 37.155600426727304 39.0 38.0 39.0 35.0 39.0 24 37.055020505797366 39.0 38.0 39.0 34.0 39.0 25 36.94359890586529 39.0 38.0 39.0 34.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 3.0 16 2.0 17 3.0 18 15.0 19 62.0 20 185.0 21 372.0 22 738.0 23 1089.0 24 1489.0 25 1959.0 26 2531.0 27 2895.0 28 3555.0 29 4116.0 30 4686.0 31 5745.0 32 7039.0 33 9808.0 34 16112.0 35 42168.0 36 149891.0 37 16435.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.03264685362441 16.977175995481712 12.028099033219023 26.962078117674853 2 18.089398631962467 18.999331854307325 36.33863543239362 26.572634081336588 3 19.466295556646575 22.13850918608042 28.884565834499202 29.5106294227738 4 14.049885750777966 15.679644443131943 35.21792254677943 35.05254725931067 5 15.259930822926627 34.30466705303453 33.104588795085995 17.330813328952857 6 34.123049549832224 33.54386690242489 17.456321359621114 14.876762188121774 7 29.40948471570585 29.561570917574446 21.75607883380891 19.272865532910792 8 26.8314021092732 33.105327077619336 20.16618739825544 19.89708341485203 9 26.215305335198728 15.71212887459902 19.44082480924625 38.631740980956 10 16.370676894340697 26.3367528119336 32.61141606281308 24.68115423091263 11 35.8210993765204 20.924403559998375 23.74722682623413 19.50727023724709 12 24.69038276257941 22.628728788219966 29.52724077977401 23.153647669426615 13 28.94953469743336 20.16397255065541 24.929586303382443 25.956906448528787 14 23.91186383116955 19.52314331171396 24.82401190111444 31.74098095600205 15 25.14885621578522 27.309809190879257 21.938803760811222 25.6025308325243 16 25.76126157719298 25.30869438425391 23.69185563623343 25.238188402319683 17 24.746123093846784 24.929586303382443 25.453397760789077 24.8708928419817 18 24.674509688112543 25.399503135855063 25.492157593789567 24.43382958224283 19 25.579644073990675 24.790050904580674 25.070967408517564 24.559337612911087 20 25.567462412190523 24.911867522582217 24.96465472371622 24.556015341511042 21 24.872738548315056 24.61286309657843 25.009689958250124 25.50470839685639 22 25.14590308565185 24.528698887777363 25.040697824650515 25.284700201920273 23 25.066537713317512 24.53866570197749 24.93696912871587 25.457827455989136 24 24.726927747979875 25.324936599987446 25.121539762051537 24.82659588998114 25 25.281377930520232 24.6763553944459 24.97535982044969 25.066906854584182 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.0 2 1.5 3 1.0 4 1.0 5 1.0 6 20.5 7 40.0 8 40.0 9 40.0 10 92.5 11 145.0 12 145.0 13 145.0 14 282.5 15 420.0 16 420.0 17 420.0 18 817.0 19 1214.0 20 1214.0 21 1214.0 22 2072.5 23 2931.0 24 2931.0 25 2931.0 26 4235.0 27 5539.0 28 5539.0 29 5539.0 30 7428.0 31 9317.0 32 9317.0 33 9317.0 34 11924.5 35 14532.0 36 14532.0 37 14532.0 38 18790.0 39 23048.0 40 23048.0 41 23048.0 42 26960.0 43 30872.0 44 30872.0 45 30872.0 46 33902.5 47 36933.0 48 36933.0 49 36933.0 50 38808.5 51 40684.0 52 40684.0 53 40684.0 54 38983.0 55 37282.0 56 37282.0 57 37282.0 58 33393.5 59 29505.0 60 29505.0 61 29505.0 62 24897.5 63 20290.0 64 20290.0 65 20290.0 66 15728.5 67 11167.0 68 11167.0 69 11167.0 70 7931.5 71 4696.0 72 4696.0 73 4696.0 74 3207.0 75 1718.0 76 1718.0 77 1718.0 78 1084.0 79 450.0 80 450.0 81 450.0 82 275.0 83 100.0 84 100.0 85 100.0 86 55.5 87 11.0 88 11.0 89 11.0 90 6.5 91 2.0 92 2.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 270899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.65608078516497 #Duplication Level Percentage of deduplicated Percentage of total 1 84.22470646502941 53.61414718844719 2 7.714918816421637 9.8220299085825 3 2.7458916214170475 5.243780966406937 4 1.4459259776988165 3.68167923383058 5 0.8905780236095794 2.834535330819197 6 0.6139936466097903 2.3450657502102503 7 0.44339427369012635 1.975731919398876 8 0.29555472551412976 1.5051084387011762 9 0.26728309691856356 1.5312774968961445 >10 1.29815206828354 14.462320809798484 >50 0.04977689720174407 2.069597535358294 >100 0.009824387605607382 0.9147254215503824 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTAAC 25 0.0060195075 19.000002 1 CCCTAGA 85 1.6958438E-8 14.529412 1 AGAAGTG 40 0.0052642245 14.250001 5 CCTAGAG 90 3.5950507E-8 13.722222 2 TAGAGGT 85 2.6713133E-7 13.411765 4 GTATTGG 50 0.0014939791 13.300001 1 GATTAAG 50 0.0014939791 13.300001 1 GACCAGC 65 5.420141E-5 13.153846 6 GTCTTGA 60 4.0726757E-4 12.666666 1 GTGACAC 150 1.8189894E-12 12.666666 19 CTAGAGG 85 3.9094775E-6 12.294118 3 AGGGTGT 55 0.0030572147 12.090909 8 CAAGGCC 55 0.0030572147 12.090909 4 GAGCCCA 165 0.0 12.090909 12 TAGCACT 65 7.9859584E-4 11.692307 4 AGTGACA 165 7.2759576E-12 11.515151 18 CCAGTGA 165 7.2759576E-12 11.515151 16 GTTGGGC 60 0.005854459 11.083333 15 TATGGCG 70 0.0014845262 10.857143 16 TGGCGAG 70 0.0014845262 10.857143 18 >>END_MODULE