##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920816_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 270899 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.867618558946326 33.0 32.0 34.0 32.0 34.0 2 32.906957943735485 33.0 32.0 34.0 32.0 34.0 3 33.094928368137204 33.0 33.0 34.0 32.0 34.0 4 33.20707717636462 33.0 33.0 34.0 32.0 35.0 5 33.11798862306616 34.0 33.0 34.0 32.0 35.0 6 35.863857009438945 37.0 35.0 37.0 33.0 37.0 7 35.83336224939922 37.0 37.0 37.0 33.0 37.0 8 35.789552563870664 37.0 35.0 37.0 33.0 37.0 9 35.780866669865894 37.0 35.0 37.0 33.0 37.0 10 35.76374220650501 37.0 35.0 37.0 33.0 37.0 11 35.65729663084766 37.0 34.0 37.0 33.0 37.0 12 35.63944495919143 37.0 34.0 37.0 33.0 37.0 13 37.41231972063389 38.0 38.0 38.0 37.0 38.0 14 37.433818508004826 38.0 38.0 38.0 37.0 38.0 15 37.434741361171504 38.0 38.0 38.0 37.0 38.0 16 37.40703730910782 38.0 38.0 38.0 37.0 38.0 17 37.32420570027944 38.0 38.0 38.0 37.0 38.0 18 37.37221990483538 38.0 38.0 38.0 37.0 38.0 19 37.37451965492674 38.0 38.0 38.0 37.0 38.0 20 37.36746167390799 38.0 38.0 38.0 37.0 38.0 21 37.35503637887183 38.0 38.0 38.0 37.0 38.0 22 37.36798954591933 38.0 38.0 38.0 37.0 38.0 23 38.02250654302895 39.0 38.0 39.0 37.0 39.0 24 38.01934300237358 39.0 38.0 39.0 37.0 39.0 25 37.883576535904524 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 1.0 17 1.0 18 1.0 19 1.0 20 1.0 21 0.0 22 8.0 23 17.0 24 46.0 25 142.0 26 252.0 27 548.0 28 913.0 29 1481.0 30 2204.0 31 3158.0 32 4419.0 33 6506.0 34 11242.0 35 30273.0 36 164684.0 37 45000.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.67716381381991 17.48511437842148 12.079040528019668 26.758681279738944 2 18.293164611165047 19.45226818851306 36.064732612523485 26.189834587798405 3 19.744258930450094 22.219351123481445 28.814798135098318 29.22159181097014 4 14.428255549116093 16.049893133603298 34.79119524250736 34.73065607477325 5 15.166538082458775 34.630987932771994 33.06472153828548 17.137752446483745 6 34.18358871756632 33.669374933093145 17.253662804218546 14.893373545121982 7 29.542744712974205 29.6523796691756 21.554158560939683 19.25071705691051 8 26.718075740405094 33.802265789094825 19.99269100291991 19.48696746758017 9 26.05620544926338 16.128520223404294 19.142189524509135 38.67308480282319 10 16.27543844753949 26.607702501670367 32.51876160487857 24.598097445911577 11 35.89049793465461 21.119310148800842 23.66970716023315 19.320484756311394 12 24.906330403582146 22.547148568285596 29.39767219517237 23.148848832959885 13 28.83473176349857 20.28431260359027 24.998615720249983 25.88233991266118 14 23.998612028837314 19.43270370137948 24.859818603981555 31.708865665801646 15 25.132244858785008 27.46484852288122 22.00008121107867 25.402825407255104 16 25.83988866699397 25.569308118523875 23.674136855433208 24.916666359048946 17 24.62725960597861 25.216778208852748 25.5471596425236 24.608802542645044 18 24.65199207084559 25.447491500522336 25.496587288989623 24.40392913964245 19 25.458565738522477 24.780822372913892 25.21567078505273 24.544941103510904 20 25.71881033152577 24.996400872649954 24.739109409780028 24.545679386044245 21 24.87679910224844 24.60695683631169 25.01153566458348 25.50470839685639 22 25.19869028678585 24.592929468178177 25.18724690751904 25.021133337516932 23 25.16029959505203 24.38214980490884 24.921834336782343 25.535716263256784 24 24.743539104980083 25.382522637588178 25.18798519005238 24.685953067379355 25 25.410577373855205 24.715853509979734 25.095330732117876 24.778238384047192 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.0 2 2.5 3 3.0 4 3.0 5 3.0 6 12.5 7 22.0 8 22.0 9 22.0 10 88.0 11 154.0 12 154.0 13 154.0 14 283.5 15 413.0 16 413.0 17 413.0 18 863.5 19 1314.0 20 1314.0 21 1314.0 22 2167.5 23 3021.0 24 3021.0 25 3021.0 26 4442.0 27 5863.0 28 5863.0 29 5863.0 30 7635.5 31 9408.0 32 9408.0 33 9408.0 34 12008.0 35 14608.0 36 14608.0 37 14608.0 38 18929.0 39 23250.0 40 23250.0 41 23250.0 42 26951.0 43 30652.0 44 30652.0 45 30652.0 46 33867.5 47 37083.0 48 37083.0 49 37083.0 50 39058.0 51 41033.0 52 41033.0 53 41033.0 54 39099.0 55 37165.0 56 37165.0 57 37165.0 58 33165.5 59 29166.0 60 29166.0 61 29166.0 62 24510.0 63 19854.0 64 19854.0 65 19854.0 66 15522.0 67 11190.0 68 11190.0 69 11190.0 70 7823.0 71 4456.0 72 4456.0 73 4456.0 74 3064.0 75 1672.0 76 1672.0 77 1672.0 78 1066.5 79 461.0 80 461.0 81 461.0 82 277.0 83 93.0 84 93.0 85 93.0 86 53.0 87 13.0 88 13.0 89 13.0 90 7.5 91 2.0 92 2.0 93 2.0 94 1.5 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 270899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.21499541153366 #Duplication Level Percentage of deduplicated Percentage of total 1 83.26564934315141 51.803719918225354 2 8.096107013089794 10.07398521341334 3 2.911925527455239 5.434962999880663 4 1.5969113455475494 3.974073281434673 5 0.9873194212160982 3.0713036630338806 6 0.6352751202164819 2.371418321359795 7 0.4648336230882597 2.0243735209293847 8 0.3530816534781321 1.7573578760830963 9 0.2462867944396525 1.3790458607385883 >10 1.385577411806992 15.269873356566086 >50 0.047639117673372776 1.9590746645975026 >100 0.009393628837003083 0.8808113237376369 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGATTG 35 0.0021639834 16.285715 14 TCAGGAC 55 1.1214623E-5 15.545455 3 TGGCGAG 55 1.9507651E-4 13.818182 18 GTTTTTA 50 0.0014939791 13.300001 1 CTAGAGG 60 4.0726757E-4 12.666666 3 ATGGCGA 60 4.0726757E-4 12.666666 17 GGACTGT 60 4.0726757E-4 12.666666 6 TATGGCG 65 7.9859584E-4 11.692307 16 TAGAGGT 85 5.2851083E-5 11.176471 4 CAAGAGG 60 0.005854459 11.083333 4 TAGAAGA 70 0.0014845262 10.857143 4 GTGACAC 105 3.4312707E-6 10.857143 19 CCTAGAG 80 3.7490562E-4 10.687501 2 CCCTAGA 90 9.447783E-5 10.555556 1 CAGGATA 100 2.3783725E-5 10.450001 4 TAGATGA 80 0.00449516 9.500001 4 AGTGACA 130 4.18916E-6 9.5 18 AGAGGTG 115 1.1012921E-4 9.086956 5 AGGACCT 105 4.461096E-4 9.04762 5 ACTGTAC 95 0.0018133627 9.0 3 >>END_MODULE