##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920814_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 210510 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.078457080423732 32.0 32.0 33.0 29.0 34.0 2 31.56555508051874 33.0 32.0 33.0 29.0 34.0 3 31.950515414944658 33.0 32.0 34.0 30.0 34.0 4 32.06309914018336 33.0 32.0 34.0 31.0 34.0 5 32.28173958481782 33.0 32.0 34.0 32.0 34.0 6 35.088019571516796 37.0 34.0 37.0 32.0 37.0 7 34.961417509857014 37.0 34.0 37.0 32.0 37.0 8 35.0650277896537 37.0 34.0 37.0 32.0 37.0 9 35.1318749703102 37.0 34.0 37.0 33.0 37.0 10 35.109220464586 37.0 34.0 37.0 32.0 37.0 11 35.065593083463966 37.0 34.0 37.0 32.0 37.0 12 35.05840102607952 37.0 34.0 37.0 32.0 37.0 13 36.77476604436844 38.0 38.0 38.0 36.0 38.0 14 36.76929837062372 38.0 38.0 38.0 36.0 38.0 15 36.68601016578785 38.0 38.0 38.0 35.0 38.0 16 36.712070685478125 38.0 38.0 38.0 35.0 38.0 17 36.71796589235666 38.0 38.0 38.0 35.0 38.0 18 36.7261602774215 38.0 38.0 38.0 35.0 38.0 19 36.70814213101515 38.0 38.0 38.0 35.0 38.0 20 36.72912925751746 38.0 38.0 38.0 35.0 38.0 21 36.773792218896965 38.0 38.0 38.0 36.0 38.0 22 36.803919053726666 38.0 38.0 38.0 36.0 38.0 23 37.34349437081374 39.0 38.0 39.0 36.0 39.0 24 37.23323357560211 39.0 38.0 39.0 35.0 39.0 25 37.11134387915063 39.0 38.0 39.0 34.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 6.0 19 35.0 20 105.0 21 261.0 22 510.0 23 775.0 24 1066.0 25 1285.0 26 1733.0 27 1959.0 28 2338.0 29 2790.0 30 3424.0 31 4023.0 32 4987.0 33 7097.0 34 11935.0 35 32379.0 36 120698.0 37 13102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.56035342739062 16.940287872310105 11.205643437366396 27.293715262932878 2 18.130255094769847 19.163935204978387 36.06622013206023 26.639589568191536 3 19.77815780723006 22.128639969597643 28.828559213339034 29.264643009833264 4 13.920478837109876 15.707567336468575 34.83444966984941 35.53750415657213 5 14.570804237328394 34.50002375184077 33.043560875967884 17.885611134862952 6 34.12854496223458 33.53522397985844 17.52173293430241 14.81449812360458 7 29.267018193910026 29.65179801434611 21.736734596931264 19.3444491948126 8 26.968790081231298 33.78509334473422 19.885991164315232 19.360125409719252 9 26.221557170680725 15.729419029974823 19.3078713600304 38.74115243931405 10 16.123699586717972 26.890884043513374 32.919101230345355 24.066315139423306 11 36.3293905277659 20.314949408579164 23.87677545009738 19.47888461355755 12 24.70903995059617 22.526720820863616 29.700726806327488 23.06351242221272 13 29.16346016816303 20.236568334045888 24.97126027267113 25.62871122511995 14 23.971307776352667 19.352999857488957 24.73564201225595 31.94005035390243 15 25.003087739299794 27.551660253669656 22.012730986651466 25.432521020379077 16 25.63773692461166 25.13039760581445 24.192674932307252 25.039190537266638 17 24.62400836064795 24.957009168210536 25.542254524725667 24.876727946415848 18 24.72234098142606 25.26150776685193 25.754595981188544 24.261555270533467 19 25.65056291862619 24.746567859009073 25.1745760296423 24.428293192722435 20 25.78879863189397 25.16840055104271 24.709514987411524 24.3332858296518 21 25.029689800959577 24.45584532801292 24.850125884756068 25.664338986271435 22 25.01686380694504 24.91568096527481 25.00213766566909 25.065317562111062 23 24.854401216094246 24.424017861384257 25.364590755783574 25.356990166737926 24 24.845375516602537 25.287634791696355 25.200703054486723 24.666286637214384 25 25.19500261270248 24.60595696166453 25.459123082038857 24.73991734359413 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 1.0 3 2.0 4 2.0 5 2.0 6 9.5 7 17.0 8 17.0 9 17.0 10 56.5 11 96.0 12 96.0 13 96.0 14 185.0 15 274.0 16 274.0 17 274.0 18 549.5 19 825.0 20 825.0 21 825.0 22 1518.5 23 2212.0 24 2212.0 25 2212.0 26 3493.0 27 4774.0 28 4774.0 29 4774.0 30 6510.5 31 8247.0 32 8247.0 33 8247.0 34 10077.5 35 11908.0 36 11908.0 37 11908.0 38 14871.5 39 17835.0 40 17835.0 41 17835.0 42 20709.0 43 23583.0 44 23583.0 45 23583.0 46 25914.5 47 28246.0 48 28246.0 49 28246.0 50 29213.5 51 30181.0 52 30181.0 53 30181.0 54 29296.0 55 28411.0 56 28411.0 57 28411.0 58 25637.0 59 22863.0 60 22863.0 61 22863.0 62 19497.0 63 16131.0 64 16131.0 65 16131.0 66 12671.5 67 9212.0 68 9212.0 69 9212.0 70 6513.5 71 3815.0 72 3815.0 73 3815.0 74 2603.0 75 1391.0 76 1391.0 77 1391.0 78 887.5 79 384.0 80 384.0 81 384.0 82 234.5 83 85.0 84 85.0 85 85.0 86 50.0 87 15.0 88 15.0 89 15.0 90 9.0 91 3.0 92 3.0 93 3.0 94 1.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 210510.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.24075762637432 #Duplication Level Percentage of deduplicated Percentage of total 1 79.4212183298811 47.04973145471844 2 10.009093382068947 11.858925502137874 3 3.723961476680273 6.61830897749913 4 1.974124759553079 4.677945856196337 5 1.126781164483042 3.3375684931551852 6 0.8825572020801463 3.137001437990461 7 0.594521534491075 2.4653934289912143 8 0.404925195670065 1.9190460298802015 9 0.29574955242694123 1.5768384798089803 >10 1.5174452684027955 14.911097463838724 >50 0.03771282203953068 1.5450815267912936 >100 0.011909312223009687 0.9030613489921716 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCAAGGT 35 0.0021618288 16.285715 3 ATCCCCC 50 8.6570435E-5 15.200001 14 CTATGGT 40 0.005259068 14.25 4 CTTGGAC 40 0.005259068 14.25 3 GATAAAG 55 1.9475131E-4 13.818182 2 TCCCCCC 55 1.9475131E-4 13.818182 15 GGATAAA 60 4.0659722E-4 12.666667 1 GTGACAC 90 5.331003E-7 12.666667 19 GGCGAGA 70 1.08228705E-4 12.214286 19 TTTAGAA 55 0.0030533206 12.090909 2 GATTAAG 55 0.0030533206 12.090909 1 CCTAGAG 65 7.972981E-4 11.692307 2 CCCCCCT 65 7.972981E-4 11.692307 16 ACTGTAC 65 7.972981E-4 11.692307 3 AGCCCAG 95 1.3446765E-5 11.0 13 CCCTAGA 70 0.0014821453 10.857143 1 AGAGGTG 70 0.0014821453 10.857143 5 GCATCCC 70 0.0014821453 10.857143 12 GGCATCC 80 3.7415762E-4 10.6875 11 TGGCGAG 125 2.1994856E-7 10.639999 18 >>END_MODULE