##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2920814_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 210510 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.951213719063226 33.0 32.0 34.0 32.0 34.0 2 32.990551517742624 33.0 32.0 34.0 32.0 34.0 3 33.189587193007455 33.0 33.0 34.0 32.0 35.0 4 33.296123699586715 34.0 33.0 34.0 32.0 35.0 5 33.206336991116814 34.0 33.0 34.0 32.0 35.0 6 35.90806137475654 37.0 36.0 37.0 33.0 37.0 7 35.885644387440024 37.0 37.0 37.0 33.0 37.0 8 35.842933827371624 37.0 35.0 37.0 33.0 37.0 9 35.82471616550283 37.0 35.0 37.0 33.0 37.0 10 35.79633746615362 37.0 35.0 37.0 33.0 37.0 11 35.70693553750416 37.0 34.0 37.0 33.0 37.0 12 35.68885088594366 37.0 35.0 37.0 33.0 37.0 13 37.442078761103986 38.0 38.0 38.0 37.0 38.0 14 37.47510807087549 38.0 38.0 38.0 37.0 38.0 15 37.47595838677498 38.0 38.0 38.0 37.0 38.0 16 37.44284832074486 38.0 38.0 38.0 37.0 38.0 17 37.36736497078524 38.0 38.0 38.0 37.0 38.0 18 37.40527765901857 38.0 38.0 38.0 37.0 38.0 19 37.40193815020664 38.0 38.0 38.0 37.0 38.0 20 37.4037622915776 38.0 38.0 38.0 37.0 38.0 21 37.40678352572324 38.0 38.0 38.0 37.0 38.0 22 37.40536791601349 38.0 38.0 38.0 37.0 38.0 23 38.05575032064985 39.0 38.0 39.0 37.0 39.0 24 38.0540686903235 39.0 38.0 39.0 37.0 39.0 25 37.926269535889034 39.0 38.0 39.0 37.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 0.0 22 4.0 23 12.0 24 40.0 25 80.0 26 184.0 27 399.0 28 697.0 29 1150.0 30 1598.0 31 2403.0 32 3120.0 33 4694.0 34 8091.0 35 22056.0 36 126638.0 37 39343.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.01691131062657 17.13172770889744 11.351954776495178 27.499406203980808 2 18.488907890361503 19.08982946178329 35.65246306588761 26.7687995819676 3 19.828511709657498 22.295852928601967 28.655645812550475 29.21998954919006 4 14.115243931404683 15.93606004465346 34.56225357465203 35.38644244928982 5 14.639209538739253 34.62115813975583 32.80176713695312 17.9378651845518 6 34.320459835637266 33.6715595458648 17.217709372476367 14.790271246021566 7 29.371051256472374 29.49076053394138 21.609424730416606 19.528763479169637 8 27.100375279084126 33.73331433186072 20.002375184076765 19.163935204978387 9 26.209206213481544 15.667189207163554 19.243266353142367 38.88033822621253 10 16.022516745047742 26.803477269488386 32.99225689990975 24.18174908555413 11 36.405396418222416 20.26934587430526 23.89862714360363 19.4266305638687 12 24.796446724621156 22.61080233718113 29.45323262552848 23.13951831266923 13 29.056101847893213 20.228967745000237 25.1745760296423 25.540354377464254 14 23.977483254952258 19.419505011638403 24.52567573986984 32.0773359935395 15 25.04536601586623 27.62196570234193 21.881620825613986 25.451047456177854 16 25.446297088024323 25.372666381644578 24.256804902379933 24.924231627951166 17 24.554177948791033 25.07196807752601 25.48620018051399 24.88765379316897 18 24.541351954776495 25.30188589615695 26.045318512184696 24.11144363688186 19 25.56268110778585 24.797871835067216 24.888128829984325 24.751318227162606 20 25.718968220037052 25.097145028739725 24.584580304973635 24.59930644624958 21 24.755118521685432 24.7057146928887 24.89810460310674 25.64106218231913 22 25.214954158947318 24.816398270865992 24.96365968362548 25.00498788656121 23 24.862476841955253 24.598831409434233 25.00736307063797 25.531328677972542 24 25.031114911405634 25.446297088024323 25.061042230772884 24.461545769797162 25 25.278609092204647 24.40169113106266 25.601634126644818 24.71806565008788 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.5 3 1.0 4 1.0 5 1.0 6 14.0 7 27.0 8 27.0 9 27.0 10 74.5 11 122.0 12 122.0 13 122.0 14 201.0 15 280.0 16 280.0 17 280.0 18 559.0 19 838.0 20 838.0 21 838.0 22 1495.5 23 2153.0 24 2153.0 25 2153.0 26 3368.5 27 4584.0 28 4584.0 29 4584.0 30 6231.0 31 7878.0 32 7878.0 33 7878.0 34 9929.5 35 11981.0 36 11981.0 37 11981.0 38 14855.5 39 17730.0 40 17730.0 41 17730.0 42 20702.5 43 23675.0 44 23675.0 45 23675.0 46 25933.0 47 28191.0 48 28191.0 49 28191.0 50 29614.0 51 31037.0 52 31037.0 53 31037.0 54 29664.0 55 28291.0 56 28291.0 57 28291.0 58 25661.0 59 23031.0 60 23031.0 61 23031.0 62 19480.0 63 15929.0 64 15929.0 65 15929.0 66 12472.0 67 9015.0 68 9015.0 69 9015.0 70 6470.0 71 3925.0 72 3925.0 73 3925.0 74 2639.0 75 1353.0 76 1353.0 77 1353.0 78 863.5 79 374.0 80 374.0 81 374.0 82 224.5 83 75.0 84 75.0 85 75.0 86 47.0 87 19.0 88 19.0 89 19.0 90 10.0 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 210510.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.15145397435083 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65368683402349 45.738262498417214 2 10.190119508121768 11.851405311393549 3 3.8964399624065527 6.797509474131179 4 2.0723749506712585 4.820464662462291 5 1.3311744357434632 3.8704864465984214 6 0.7799056633064455 2.721158897046019 7 0.6566065587441516 2.6727838256047187 8 0.4251388589272376 1.9777954230092227 9 0.3357373516035474 1.7571253634319712 >10 1.6111373433136678 15.455379936520641 >50 0.03675220262753674 1.4977686737017053 >100 0.010926330510889301 0.8398594876831004 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAACT 25 0.0060151466 19.000002 4 TCTCCCC 45 6.7280355E-4 14.777779 10 CTCTCCC 40 0.005259068 14.25 9 ATAGACA 50 0.0014920493 13.300001 6 CAGGACT 70 0.0014821453 10.857143 4 TATGGCG 120 1.6777736E-5 9.5 16 TGGCGAG 125 2.7175734E-5 9.119999 18 AGCTGCT 95 0.0018098676 9.0 7 AGAGGTG 95 0.0018098676 9.0 5 AATGTCC 85 0.007390368 8.941176 8 ATGGCGA 140 1.0255854E-4 8.142858 17 ATATGGC 190 6.22478E-5 7.0 15 AGGACCT 165 6.8178243E-4 6.9090905 5 TGGAATA 155 0.0026874456 6.7419357 11 CCTGGAA 170 9.57675E-4 6.7058825 9 AATATGG 230 1.10552864E-4 6.195652 14 GAGGTGG 185 0.0024873423 6.162162 6 ACCTGGA 190 0.0033523748 6.0 8 >>END_MODULE