FastQCFastQC Report
Mon 15 Aug 2016
SRR2920813_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2920813_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66673
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAGAGGTGGAGCCCAGTGACAC1300.19498147675970784No Hit
GGGTCGACTCTTTCTGGATGTTGTA810.12148845859643333No Hit
CCCTCTCTGATTACAACATCCAGAA740.11098945600167985No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)