##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936807.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 156131 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.680050726633404 31.0 31.0 34.0 30.0 34.0 2 31.829124261037204 31.0 31.0 34.0 30.0 34.0 3 31.223991391844027 31.0 31.0 34.0 28.0 34.0 4 35.30282903459275 37.0 35.0 37.0 33.0 37.0 5 31.72002997482883 37.0 35.0 37.0 0.0 37.0 6 33.67575945840352 37.0 35.0 37.0 17.0 37.0 7 20.947480000768586 32.0 0.0 37.0 0.0 37.0 8 28.02243628747654 35.0 17.0 37.0 17.0 37.0 9 34.51064170472232 35.0 32.0 39.0 28.0 39.0 10 36.17395008038122 37.0 35.0 39.0 32.0 39.0 11 36.66136129276057 38.0 35.0 39.0 33.0 39.0 12 36.989489595275764 39.0 37.0 39.0 33.0 39.0 13 36.79588294445049 39.0 37.0 39.0 33.0 39.0 14 38.27557627889401 40.0 38.0 41.0 34.0 41.0 15 38.36911952142752 40.0 38.0 41.0 34.0 41.0 16 38.419621984103095 40.0 38.0 41.0 34.0 41.0 17 38.32265213186363 40.0 37.0 41.0 34.0 41.0 18 38.109267217913164 40.0 37.0 41.0 33.0 41.0 19 37.98651773190462 40.0 37.0 41.0 34.0 41.0 20 37.86741902633045 40.0 36.0 41.0 33.0 41.0 21 37.82110535383748 39.0 36.0 41.0 33.0 41.0 22 37.68780062895902 39.0 35.0 41.0 33.0 41.0 23 37.59284831327539 39.0 35.0 41.0 33.0 41.0 24 37.326642370829624 39.0 35.0 41.0 33.0 41.0 25 37.178753738847504 39.0 35.0 41.0 33.0 41.0 26 37.053435896778986 39.0 35.0 40.0 33.0 41.0 27 37.0266891264387 39.0 35.0 40.0 33.0 41.0 28 36.91990700117209 39.0 35.0 40.0 33.0 41.0 29 36.82657511961109 39.0 35.0 40.0 32.0 41.0 30 36.585027957292276 38.0 35.0 40.0 31.0 41.0 31 36.39846667221756 38.0 35.0 40.0 31.0 41.0 32 36.23937590869206 38.0 35.0 40.0 30.0 41.0 33 35.953820829944085 38.0 35.0 40.0 30.0 41.0 34 35.662283595186096 38.0 35.0 40.0 27.0 41.0 35 35.348470194900436 38.0 35.0 40.0 25.0 41.0 36 35.05676002843766 38.0 34.0 40.0 24.0 41.0 37 34.886242962640345 38.0 34.0 40.0 23.0 41.0 38 34.6025645131332 38.0 34.0 40.0 21.0 41.0 39 34.259391152301596 38.0 33.0 40.0 18.0 41.0 40 33.93173681075507 38.0 33.0 40.0 15.0 41.0 41 33.82311008063741 38.0 33.0 40.0 15.0 41.0 42 33.66077844886666 38.0 33.0 40.0 15.0 41.0 43 33.46676829073022 38.0 33.0 40.0 15.0 41.0 44 33.25875066450609 37.0 33.0 40.0 15.0 41.0 45 33.238946781869075 37.0 33.0 40.0 15.0 41.0 46 32.86935329947288 37.0 31.0 40.0 12.0 41.0 47 32.70975014571097 37.0 31.0 40.0 12.0 41.0 48 32.59539104982355 37.0 31.0 40.0 11.0 41.0 49 32.484727568516185 36.0 31.0 40.0 10.0 41.0 50 32.33613439995901 36.0 31.0 40.0 10.0 41.0 51 30.563405089316024 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 19.0 10 6.0 11 11.0 12 8.0 13 1.0 14 7.0 15 9.0 16 12.0 17 34.0 18 80.0 19 135.0 20 226.0 21 434.0 22 708.0 23 1223.0 24 1925.0 25 2861.0 26 3699.0 27 4131.0 28 4259.0 29 4270.0 30 4583.0 31 5181.0 32 6341.0 33 8802.0 34 11540.0 35 14535.0 36 14993.0 37 23715.0 38 25492.0 39 16886.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.8485886851426 17.149701212443397 20.580794332963986 22.420915769450016 2 37.28151360075834 27.753617154825115 19.36002459473135 15.604844649685202 3 26.817864485592224 26.95620984942132 32.54318488961193 13.682740775374524 4 24.14446842715412 20.545567504211206 39.49119649525078 15.818767573383887 5 20.962525059085 31.933440508291117 29.010254209606035 18.09378022301785 6 21.782989925126977 33.19968488000461 32.75838878890163 12.258936405966784 7 37.25205116216511 43.717775457788655 15.20069685072151 3.829476529324734 8 62.49623713420141 11.229032030794652 21.082296276844446 5.192434558159494 9 58.017946468030054 10.66348130736369 20.95740115672096 10.361171067885302 10 31.08095125247388 27.45450935432425 28.398588364898707 13.065951028303155 11 24.498658178068418 25.163484509802664 32.75646732551511 17.581389986613804 12 23.316317707566082 23.589805996246742 37.528741889823294 15.565134406363887 13 18.843150943758765 25.814860597831306 39.15814284158816 16.18384561682177 14 14.740186125753374 31.88476343583273 35.37478143353978 18.000269004874113 15 15.315344166116915 28.912900064689268 41.06551549660221 14.706240272591605 16 17.087573896279405 27.46860008582536 37.65940140010632 17.784424617788908 17 16.737227072138143 28.230140074680875 33.888209260172545 21.144423593008437 18 16.71737195047748 30.84973515829656 34.63886095650447 17.79403193472148 19 18.27119534237275 30.289308337229638 32.584816596319754 18.854679724077858 20 19.402937277030187 28.399228852694215 35.55155606509918 16.646277805176425 21 20.28873189821368 28.616354215370425 34.388430228462 16.706483657953896 22 18.02076461433027 25.346023531521606 34.65871607816513 21.974495775982987 23 18.386483145563663 29.36252249713382 35.61880728362721 16.63218707367531 24 20.341892385240598 27.106083993569502 34.533820958041645 18.01820266314825 25 19.16659728048882 30.767752720471915 33.022269760649706 17.043380238389556 26 17.20734511403885 27.503826914578145 33.91510974758376 21.373718223799244 27 18.64203777597018 28.588813240163706 33.81327218809845 18.955876795767658 28 15.976327571078134 27.633205449270164 37.655558473333286 18.734908506318412 29 18.494725583004016 27.89836739660926 35.57653508912388 18.030371931262852 30 16.727619755205563 29.0813483549071 35.694384843496806 18.496647046390528 31 20.736432867271716 30.73060442833262 31.224420518667017 17.30854218572865 32 21.910446996432484 30.562156138114787 30.688332233829286 16.839064631623444 33 17.817089495359667 30.501309797541808 30.678084429101204 21.00351627799732 34 17.908679250116887 29.93383761072433 32.7045878140792 19.45289532507958 35 18.29169095182891 27.537132279944405 31.023947838673934 23.147228929552746 36 18.77269728625321 29.78588492996266 31.52737124594091 19.914046537843223 37 18.72786314056786 28.30699861014148 32.96590683464527 19.999231414645394 38 17.16955633410405 32.22934586981445 30.707546867694436 19.89355092838706 39 20.34317336083161 29.18510737777892 30.71843516021802 19.753284101171452 40 18.63819484919715 28.26985031800219 34.685616565576346 18.406338267224317 41 16.979971946634556 29.881317611492914 32.94797317637113 20.190737265501408 42 17.249617308542188 29.137711280911542 33.23939512332593 20.373276287220346 43 20.066482633173425 27.1182532616841 30.589056625526002 22.226207479616473 44 19.10831289109786 27.726076179618396 32.08907904259885 21.076531886684897 45 19.38564410655155 28.06041080887204 30.13431029071741 22.419634793859004 46 21.26419481076788 29.79933517366827 29.735926881913265 19.200543133650587 47 19.452254837284073 27.637048376043193 34.363451204437304 18.54724558223543 48 19.10703191550685 28.98847762455886 31.347394175403988 20.5570962845303 49 17.236807552632087 28.392183486943658 34.63629900532245 19.734709955101806 50 16.99150072695365 26.60650351307556 35.77956972029898 20.622426039671815 51 17.116395847077133 26.536049855570003 33.58589902069416 22.761655276658704 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1019.0 1 1509.5 2 2000.0 3 6012.0 4 10024.0 5 6595.5 6 3167.0 7 2490.0 8 1813.0 9 1663.5 10 1514.0 11 1401.0 12 1288.0 13 1253.0 14 1218.0 15 1200.5 16 1183.0 17 1110.0 18 1037.0 19 1005.0 20 973.0 21 1021.0 22 1069.0 23 1106.0 24 1143.0 25 1330.5 26 1721.0 27 1924.0 28 2296.0 29 2668.0 30 3113.0 31 3558.0 32 3892.5 33 4227.0 34 4426.0 35 4625.0 36 5016.5 37 5408.0 38 5738.5 39 6069.0 40 6575.5 41 7082.0 42 7962.5 43 8843.0 44 10465.0 45 12087.0 46 13901.0 47 15715.0 48 13702.0 49 11689.0 50 10665.0 51 9641.0 52 8447.0 53 7253.0 54 6586.0 55 5919.0 56 5517.5 57 5116.0 58 4754.5 59 4393.0 60 4159.0 61 3925.0 62 3362.0 63 2799.0 64 2242.5 65 1686.0 66 1372.5 67 1059.0 68 846.5 69 634.0 70 514.0 71 394.0 72 299.5 73 205.0 74 158.5 75 86.5 76 61.0 77 46.0 78 31.0 79 24.5 80 18.0 81 13.5 82 9.0 83 8.0 84 7.0 85 4.0 86 1.0 87 3.0 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 156131.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.57198762577579 #Duplication Level Percentage of deduplicated Percentage of total 1 72.97756914774006 33.257328781600066 2 9.807173375309198 8.93864767406857 3 4.993534967393749 6.8269594122883985 4 3.20159658196537 5.836124792642076 5 2.1320553181920396 4.858099928905855 6 1.6640431751742748 4.550025299267922 7 1.2634922419608725 4.030589697113322 8 0.9838093096469529 3.5867316548283172 9 0.6802338655273218 2.7899648372200265 >10 2.196705644254554 14.270708571648166 >50 0.05200134922419609 1.6473346100390058 >100 0.0379469305149539 3.775675554502309 >500 0.007027209354621093 2.0508419212071916 >1k 0.002810883741848437 3.5809672646687716 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3551 2.274372161838456 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2040 1.3065951028303155 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 792 0.5072663340400049 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 688 0.440655603307479 No Hit GAATCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTC 638 0.4086312135322261 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCG 573 0.36699950682439747 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGC 511 0.32728926350308396 No Hit TCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 485 0.3106365808199525 No Hit TATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 471 0.3016697516828817 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 426 0.27284780088515415 No Hit GAATCTATCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTC 418 0.26772389852111367 RNA PCR Primer, Index 40 (95% over 24bp) GAATGAAACGGCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGC 348 0.22288975283575974 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCG 322 0.20623707015262824 No Hit GAACTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCT 292 0.18702243628747653 RNA PCR Primer, Index 40 (96% over 25bp) GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 255 0.16332438785378944 No Hit GAATCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTT 222 0.14218829060212257 No Hit GAATATGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTC 216 0.13834536382909224 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 199 0.12745707130550626 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCG 175 0.11208536421338491 No Hit CATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 173 0.1108043886223748 No Hit GAATCTATCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTT 170 0.10888292523585964 RNA PCR Primer, Index 40 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.404877955050566E-4 0.0 0.0 0.07429658427858657 0.0 2 6.404877955050566E-4 0.0 0.0 0.45730828599061046 0.0 3 6.404877955050566E-4 0.0 0.0 0.678276575439855 0.0 4 6.404877955050566E-4 0.0 0.0 1.1810594949113244 0.0 5 6.404877955050566E-4 0.0 0.0 2.619595083615682 0.0 6 6.404877955050566E-4 0.0 0.0 3.2286989771409904 0.0 7 6.404877955050566E-4 0.0 0.0 3.741729701340541 0.0 8 6.404877955050566E-4 0.0 0.0 4.413601398825345 0.0 9 6.404877955050566E-4 0.0 0.0 4.617276517795953 0.0 10 6.404877955050566E-4 0.0 0.0 6.080150642729503 0.0 11 6.404877955050566E-4 0.0 0.0 6.493905758625769 0.0 12 6.404877955050566E-4 0.0 0.0 7.6884154972427 0.0 13 6.404877955050566E-4 0.0 0.0 7.851099397300985 0.0 14 6.404877955050566E-4 0.0 0.0 7.964465737105379 0.0 15 6.404877955050566E-4 0.0 0.0 8.127149637163663 0.0 16 6.404877955050566E-4 0.0 0.0 8.30648621990508 0.0 17 6.404877955050566E-4 0.0 0.0 8.47237255894089 0.0 18 6.404877955050566E-4 0.0 0.0 8.677969141298012 0.0 19 6.404877955050566E-4 0.0 0.0 8.8028642614215 0.0 20 6.404877955050566E-4 0.0 0.0 8.934164259500035 0.0 21 6.404877955050566E-4 0.0 0.0 9.102612549717865 0.0 22 6.404877955050566E-4 0.0 0.0 9.244800840319988 0.0 23 6.404877955050566E-4 0.0 0.0 9.390191569899635 0.0 24 6.404877955050566E-4 0.0 0.0 9.506760348681556 0.0 25 6.404877955050566E-4 0.0 0.0 9.627172054236507 0.0 26 6.404877955050566E-4 0.0 0.0 9.734133516085851 0.0 27 6.404877955050566E-4 0.0 0.0 9.844937904708226 0.0 28 6.404877955050566E-4 0.0 0.0 9.95830424451262 0.0 29 6.404877955050566E-4 0.0 0.0 10.06462521856646 0.0 30 6.404877955050566E-4 0.0 0.0 10.206173021373077 0.0 31 0.0012809755910101132 0.0 0.0 10.3483613119752 0.0 32 0.0012809755910101132 0.0 0.0 10.473896919894191 0.0 33 0.0012809755910101132 0.0 0.0 10.63209740538394 0.0 34 0.0012809755910101132 0.0 0.0 10.767880818031012 0.0 35 0.0012809755910101132 0.0 0.0 10.945936425181419 0.0 36 0.0012809755910101132 0.0 0.0 11.100934471693641 0.0 37 0.0012809755910101132 0.0 0.0 11.231593981976673 0.0 38 0.0012809755910101132 0.0 0.0 11.400682759990008 0.0 39 0.0012809755910101132 0.0 0.0 11.539668611614605 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTTA 35 1.2029341E-7 45.000004 23 TACCCGC 35 1.2029341E-7 45.000004 28 TGAAACG 75 0.0 45.000004 4 AACGGGT 35 1.2029341E-7 45.000004 21 AAACGGC 75 0.0 45.000004 6 GTTACCC 35 1.2029341E-7 45.000004 26 TTACCCG 35 1.2029341E-7 45.000004 27 GGTTCAA 35 1.2029341E-7 45.000004 16 GGTTACC 35 1.2029341E-7 45.000004 25 TCAACGG 35 1.2029341E-7 45.000004 19 CCGGCGT 25 3.8752798E-5 45.0 40 GCCGGCC 20 7.0145464E-4 45.0 43 TTCAACG 40 6.7502697E-9 45.0 18 CACGAAT 25 3.8752798E-5 45.0 7 CGCGAAG 25 3.8752798E-5 45.0 2 GGCCCGA 25 3.8752798E-5 45.0 24 CGTTATT 245 0.0 45.0 1 GGGACGT 20 7.0145464E-4 45.0 8 CGGATAG 20 7.0145464E-4 45.0 2 ACGTCCC 20 7.0145464E-4 45.0 7 >>END_MODULE