##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936805.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 83528 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94806531941385 31.0 31.0 34.0 30.0 34.0 2 32.1353677808639 33.0 31.0 34.0 30.0 34.0 3 31.887462886696678 33.0 31.0 34.0 30.0 34.0 4 35.713892347476296 37.0 35.0 37.0 35.0 37.0 5 32.105629250071836 37.0 35.0 37.0 10.0 37.0 6 33.9608753950771 37.0 35.0 37.0 19.0 37.0 7 20.69479695431472 32.0 0.0 37.0 0.0 37.0 8 28.0482592663538 35.0 17.0 37.0 17.0 37.0 9 34.76512067809597 37.0 32.0 39.0 31.0 39.0 10 36.28321042045781 37.0 35.0 39.0 32.0 39.0 11 36.765994636529065 39.0 37.0 39.0 33.0 39.0 12 36.942606072215305 39.0 35.0 39.0 33.0 39.0 13 36.554209366918876 39.0 35.0 39.0 32.0 39.0 14 37.93943348338282 40.0 37.0 41.0 33.0 41.0 15 38.17451632985346 40.0 37.0 41.0 33.0 41.0 16 38.29763672062063 40.0 37.0 41.0 34.0 41.0 17 38.29515850972129 40.0 37.0 41.0 34.0 41.0 18 38.19097787568241 40.0 37.0 41.0 34.0 41.0 19 38.12346757973374 40.0 37.0 41.0 34.0 41.0 20 38.083516904511065 40.0 36.0 41.0 34.0 41.0 21 37.96514941097596 40.0 36.0 41.0 34.0 41.0 22 37.932992529451205 40.0 36.0 41.0 34.0 41.0 23 37.90791111962456 40.0 36.0 41.0 34.0 41.0 24 37.797205727420746 40.0 35.0 41.0 33.0 41.0 25 37.65488219519203 39.0 35.0 41.0 33.0 41.0 26 37.54795996552054 39.0 35.0 41.0 33.0 41.0 27 37.42352265108706 39.0 35.0 41.0 33.0 41.0 28 37.36139977013696 39.0 35.0 41.0 33.0 41.0 29 37.35577291447179 39.0 35.0 41.0 33.0 41.0 30 37.223446030073745 39.0 35.0 41.0 33.0 41.0 31 37.09359735657504 39.0 35.0 41.0 32.0 41.0 32 36.95973805191073 39.0 35.0 41.0 32.0 41.0 33 36.73551383967053 39.0 35.0 41.0 31.0 41.0 34 36.570754716981135 39.0 35.0 41.0 31.0 41.0 35 36.399231395460205 39.0 35.0 41.0 30.0 41.0 36 36.20581122497845 39.0 35.0 41.0 30.0 41.0 37 36.14276649746193 39.0 35.0 41.0 30.0 41.0 38 36.04756488842065 39.0 35.0 40.0 29.0 41.0 39 36.01193611723015 39.0 35.0 41.0 29.0 41.0 40 35.818468058615075 39.0 35.0 40.0 28.0 41.0 41 35.74489991380136 39.0 35.0 40.0 28.0 41.0 42 35.677521310219326 38.0 35.0 40.0 27.0 41.0 43 35.609041279570924 38.0 35.0 40.0 27.0 41.0 44 35.45573939277847 38.0 35.0 40.0 27.0 41.0 45 35.383703668231014 38.0 34.0 40.0 26.0 41.0 46 35.273596877693706 38.0 34.0 40.0 26.0 41.0 47 35.20557178431185 38.0 34.0 40.0 26.0 41.0 48 35.121300641700984 38.0 34.0 40.0 25.0 41.0 49 35.02026865242793 38.0 34.0 40.0 25.0 41.0 50 34.82793793697922 38.0 34.0 40.0 24.0 41.0 51 33.034251987357536 36.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 7.0 10 7.0 11 2.0 12 2.0 13 0.0 14 2.0 15 1.0 16 10.0 17 21.0 18 33.0 19 45.0 20 98.0 21 148.0 22 290.0 23 401.0 24 629.0 25 899.0 26 1082.0 27 1228.0 28 1200.0 29 1415.0 30 1734.0 31 2101.0 32 2880.0 33 4570.0 34 6450.0 35 8202.0 36 8710.0 37 15208.0 38 16021.0 39 10130.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.58346901637774 21.927976247485873 24.64802222009386 14.840532516042524 2 33.81859975098171 24.09611148357437 26.12537113303323 15.959917632410688 3 30.977636241739297 24.543865530121636 28.741260415668997 15.73723781247007 4 28.36294416243655 25.62374293650034 29.42246911215401 16.59084378890911 5 22.209319030744183 37.608945503304284 24.85274399003927 15.328991475912268 6 24.701896370079492 35.476726367206204 27.14419116942822 12.677186093286084 7 46.68614117421703 43.8092615649842 6.63011205823197 2.8744852025668037 8 80.66995498515467 6.303275548319126 9.999042237333589 3.027727229192606 9 74.3882290968298 9.099942534240016 11.742170290202088 4.769658078728091 10 42.78445551192414 29.51465376879609 17.828752035245664 9.872138684034097 11 36.37223446030074 25.53036107652524 23.066516617182263 15.030887845991764 12 35.15587587395843 22.532563930657982 27.07834498611244 15.233215209271142 13 24.42534240015324 29.70740350541136 27.875682405899816 17.991571688535583 14 17.367828752035248 33.90599559429173 28.311464419116945 20.414711234556076 15 17.078105545445837 27.432717172684605 39.21080356287712 16.278373718992434 16 20.332104204578105 24.983239153337802 37.659228043290874 17.02542859879322 17 19.83526482137726 25.205918973278425 30.618475241835075 24.34034096350924 18 21.180921367685087 27.35729336270472 31.020735561727804 20.441049707882385 19 25.78057657312518 27.492577339335313 27.82180825591418 18.905037831625325 20 29.34584809884111 25.031127286658368 28.86696676563548 16.75605784886505 21 24.009912843597355 27.44468920601475 29.970788238674455 18.57460971171344 22 20.890000957762666 26.506081792931713 28.843022698975197 23.760894550330427 23 20.985777224403794 28.19294128914855 30.32755483191265 20.493726654535006 24 21.526913130926157 25.173594483287044 34.302269897519395 18.997222488267408 25 19.729910928072023 28.159419595824154 31.458911981610953 20.651757494492866 26 20.824154774446892 31.63849248156307 28.804712192318743 18.732640551671295 27 20.582319701178047 32.14371228809501 29.757686045397953 17.516281965328993 28 19.60540178143856 28.849008715640263 33.68571018101714 17.85987932190403 29 19.56469686811608 27.061584139450247 33.161335121156974 20.2123838712767 30 21.848960827506943 29.732544775404655 30.440091945215975 17.978402451872427 31 25.197538549947325 27.720045972607988 27.789483765922807 19.292931711521884 32 25.887127669763434 30.701082271813046 26.488123742936498 16.923666315487022 33 23.991954793602147 30.699885068480032 27.29863039938703 18.00952973853079 34 21.206062637678382 29.955224595345275 27.722440379274015 21.116272387702328 35 22.625945790633082 27.309405229384158 29.600852408773104 20.463796571209656 36 24.816827890048845 28.646681352360886 27.13700794943013 19.399482808160137 37 21.159371707690834 31.955751364811803 29.3877502154966 17.497126712000764 38 21.379657120965426 31.461306388276984 27.304616416052102 19.854420074705487 39 23.17426491715353 27.860118762570636 29.048941672253616 19.91667464802222 40 23.266449573795615 27.722440379274015 29.471554448807584 19.539555598122785 41 19.217507901541996 28.48505890240399 30.315582798582515 21.981850397471504 42 21.268317210995118 29.11957666890145 27.229192606072218 22.382913514031223 43 23.64356862369505 28.408437889091083 27.04362608945503 20.904367397758836 44 21.01091849439709 29.9743798486735 29.004645148932095 20.010056507997316 45 20.58830571784312 32.03716119145676 26.145723589694477 21.228809501005653 46 20.10822718130447 32.152092711426114 26.747916866200555 20.991763241068863 47 22.40566037735849 29.20218369887942 28.165405612489224 20.226750311272866 48 22.012977684129872 26.175653673019827 30.677138205152765 21.13423043769754 49 20.20160904127957 27.63863614596303 29.807968585384543 22.35178622737286 50 18.277703285125945 31.51278613159659 29.72536155540657 20.48414902787089 51 20.220764294607797 29.2943683555215 27.620678095967822 22.864189253902882 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 81.0 1 166.5 2 252.0 3 917.0 4 1582.0 5 1080.0 6 578.0 7 516.5 8 455.0 9 450.0 10 445.0 11 404.0 12 363.0 13 344.5 14 326.0 15 333.0 16 340.0 17 338.5 18 337.0 19 330.5 20 324.0 21 390.0 22 456.0 23 609.5 24 763.0 25 870.5 26 1167.5 27 1357.0 28 1636.0 29 1915.0 30 2104.5 31 2294.0 32 2518.5 33 2743.0 34 2682.5 35 2622.0 36 2665.0 37 2708.0 38 3212.5 39 3717.0 40 4519.5 41 5322.0 42 5921.0 43 6520.0 44 6524.5 45 6529.0 46 6539.0 47 6549.0 48 6095.5 49 5642.0 50 5282.5 51 4923.0 52 4646.0 53 4369.0 54 4069.5 55 3770.0 56 3533.0 57 3296.0 58 3345.5 59 3395.0 60 3265.0 61 3135.0 62 2710.5 63 2286.0 64 1801.5 65 1317.0 66 1047.5 67 778.0 68 585.0 69 392.0 70 334.5 71 277.0 72 236.0 73 195.0 74 143.5 75 76.0 76 60.0 77 39.0 78 18.0 79 13.0 80 8.0 81 6.5 82 5.0 83 4.5 84 4.0 85 5.5 86 7.0 87 3.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 83528.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.034479455990805 #Duplication Level Percentage of deduplicated Percentage of total 1 68.1549043062201 27.285461162723877 2 8.764952153110048 7.018005938128531 3 5.158492822966507 6.19552724834786 4 3.4569377990430623 5.535868211857102 5 2.8588516746411483 5.722631931807298 6 2.08433014354067 5.006704338664878 7 1.8630382775119618 5.221003735274399 8 1.5998803827751196 5.1240302653002585 9 1.2709330143540671 4.5793027487788525 >10 4.736842105263158 25.895508093094534 >50 0.03588516746411483 0.9398046164160521 >100 0.011961722488038277 0.8212814864476583 >500 0.0029904306220095694 0.6548702231587012 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 547 0.6548702231587012 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 317 0.3795134565654631 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 127 0.15204482329278804 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 126 0.15084761995977397 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 116 0.13887558662963317 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 86 0.1029594866392108 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023944066660281583 0.0 2 0.0 0.0 0.0 0.1424671966286754 0.0 3 0.0 0.0 0.0 0.20232736327937936 0.0 4 0.0 0.0 0.0 0.2813427832583086 0.0 5 0.0 0.0 0.0 0.5363470931903075 0.0 6 0.0 0.0 0.0 0.7614213197969543 0.0 7 0.0 0.0 0.0 0.9194521597548128 0.0 8 0.0 0.0 0.0 1.2666411263288957 0.0 9 0.0 0.0 0.0 1.3971362896274304 0.0 10 0.0 0.0 0.0 1.8221434728474284 0.0 11 0.0 0.0 0.0 2.2615170960635953 0.0 12 0.0 0.0 0.0 2.781103342591706 0.0 13 0.0 0.0 0.0 3.0804041758452256 0.0 14 0.0 0.0 0.0 3.251604252466239 0.0 15 0.0 0.0 0.0 3.41921271908821 0.0 16 0.0 0.0 0.0 3.710133129010631 0.0 17 0.0 0.0 0.0 4.059716502250742 0.0 18 0.0 0.0 0.0 4.439229958816205 0.0 19 0.0 0.0 0.0 4.659515372090796 0.0 20 0.0 0.0 0.0 4.839095872042908 0.0 21 0.0 0.0 0.0 5.113255435303132 0.0 22 0.0 0.0 0.0 5.39459821856144 0.0 23 0.0 0.0 0.0 5.66157456182358 0.0 24 0.0 0.0 0.0 5.889043195096255 0.0 25 0.0 0.0 0.0 6.114117421702902 0.0 26 0.0 0.0 0.0 6.244612585001437 0.0 27 0.0 0.0 0.0 6.425390288286563 0.0 28 0.0011972033330140792 0.0 0.0 6.604970788238674 0.0 29 0.0011972033330140792 0.0 0.0 6.816875778182166 0.0 30 0.0011972033330140792 0.0 0.0 7.026386361459631 0.0 31 0.0011972033330140792 0.0 0.0 7.244277368068193 0.0 32 0.0011972033330140792 0.0 0.0 7.460971171343741 0.0 33 0.0011972033330140792 0.0 0.0 7.6525237046259935 0.0 34 0.0011972033330140792 0.0 0.0 7.909922421224021 0.0 35 0.0011972033330140792 0.0 0.0 8.181687577818217 0.0 36 0.0011972033330140792 0.0 0.0 8.422325447754046 0.0 37 0.0011972033330140792 0.0 0.0 8.661766114356862 0.0 38 0.0011972033330140792 0.0 0.0 8.894023560961594 0.0 39 0.0011972033330140792 0.0 0.0 9.103534144239058 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGGG 25 3.8597056E-5 45.000004 3 ATAGGGC 25 3.8597056E-5 45.000004 5 AATCTAC 25 3.8597056E-5 45.000004 17 CGTTTTA 135 0.0 45.000004 1 GTACGGG 50 2.1827873E-11 45.000004 3 TATCATC 20 6.9957256E-4 45.0 33 GTTTAGG 20 6.9957256E-4 45.0 3 TATGGAG 20 6.9957256E-4 45.0 2 GCTATCA 20 6.9957256E-4 45.0 31 TACGGGA 20 6.9957256E-4 45.0 4 AGACAAG 20 6.9957256E-4 45.0 2 GTTCAGA 20 6.9957256E-4 45.0 1 TAAGGAT 20 6.9957256E-4 45.0 5 AGCTATC 20 6.9957256E-4 45.0 30 GGCGATG 20 6.9957256E-4 45.0 8 CATCCAA 20 6.9957256E-4 45.0 36 TGACTTG 20 6.9957256E-4 45.0 20 CTGTGGG 20 6.9957256E-4 45.0 3 TACCCAT 30 2.1413216E-6 44.999996 17 AAGACGC 30 2.1413216E-6 44.999996 39 >>END_MODULE