SRR2936802.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936802.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	127924
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	677	0.5292204746568275	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	415	0.32441136925049247	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	181	0.14149025984178104	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	151	0.11803883555861291	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTC	138	0.1078765517025734	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCG	128	0.1000594102748507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCGGT	30	2.1503492E-6	45.000004	9
ACTAGGA	30	2.1503492E-6	45.000004	4
GGGCCGG	30	2.1503492E-6	45.000004	8
CCCATTA	30	2.1503492E-6	45.000004	33
GGTACGG	20	7.0097705E-4	45.0	2
CACGGGT	20	7.0097705E-4	45.0	4
TAGACGG	20	7.0097705E-4	45.0	2
TTTCGTT	20	7.0097705E-4	45.0	44
ATTGTAC	20	7.0097705E-4	45.0	19
TTCGTCG	20	7.0097705E-4	45.0	40
TAACGGG	35	1.2006421E-7	45.0	3
AGGCGAT	25	3.8713275E-5	45.0	7
GTGGCGG	25	3.8713275E-5	45.0	14
ACGGGTT	20	7.0097705E-4	45.0	5
ACGGGAA	20	7.0097705E-4	45.0	5
GCACCAC	20	7.0097705E-4	45.0	29
TCGTGTA	20	7.0097705E-4	45.0	17
TCTACGG	20	7.0097705E-4	45.0	2
GTTCGTC	20	7.0097705E-4	45.0	39
CACTACT	20	7.0097705E-4	45.0	21