SRR2936801.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936801.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67643
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	629	0.929881879869314	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	329	0.486377008707479	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG	148	0.21879573643983855	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC	123	0.18183699717635232	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	121	0.17888029803527342	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC	120	0.17740194846473398	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	111	0.16409680232987892	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG	97	0.1433999083423266	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC	82	0.12122466478423487	No Hit
GAATCTATCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC	71	0.10496281950830094	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTCCG	30	2.1352225E-6	45.000004	44
CAGCACA	30	2.1352225E-6	45.000004	45
TACGGGC	30	2.1352225E-6	45.000004	4
CAACAAG	35	1.1894008E-7	45.000004	2
GTATAGG	30	2.1352225E-6	45.000004	3
GTTTAGG	35	1.1894008E-7	45.000004	3
CCTCCGC	30	2.1352225E-6	45.000004	45
ACGGCTG	35	1.1894008E-7	45.000004	8
TCTTATT	30	2.1352225E-6	45.000004	11
TAGGCGA	30	2.1352225E-6	45.000004	6
CGTTATT	75	0.0	45.0	1
ATAAGTG	20	6.9862226E-4	45.0	31
GGCAATT	20	6.9862226E-4	45.0	10
TAAGTGC	20	6.9862226E-4	45.0	32
AGCTATA	20	6.9862226E-4	45.0	25
TACGGCT	20	6.9862226E-4	45.0	7
TTTCACT	20	6.9862226E-4	45.0	44
GAATGAA	20	6.9862226E-4	45.0	1
AAAAGTC	20	6.9862226E-4	45.0	34
TTGGGCA	20	6.9862226E-4	45.0	5