SRR2936800.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936800.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	128105
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	656	0.5120799344287889	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.2911674017407595	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	136	0.10616291323523673	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGG	25	3.8713602E-5	45.000004	3
CACGGGC	25	3.8713602E-5	45.000004	4
TGGGTCT	25	3.8713602E-5	45.000004	6
GCGTAGG	25	3.8713602E-5	45.000004	3
GACCGAT	35	1.2006603E-7	45.0	9
GATCAAT	20	7.009812E-4	45.0	35
CGCGAGG	20	7.009812E-4	45.0	3
ATCAATT	20	7.009812E-4	45.0	36
TATGAGG	20	7.009812E-4	45.0	3
TCAATTG	20	7.009812E-4	45.0	37
AATTGTC	20	7.009812E-4	45.0	39
CTCGCTT	20	7.009812E-4	45.0	41
TTCGGGA	20	7.009812E-4	45.0	4
GCTACGG	20	7.009812E-4	45.0	2
TCGACGT	20	7.009812E-4	45.0	26
ACGACGG	20	7.009812E-4	45.0	2
TTGGGCG	20	7.009812E-4	45.0	5
TGCGTAG	20	7.009812E-4	45.0	2
TGAGGAT	30	2.1503765E-6	44.999996	5
CGTTTTA	140	0.0	43.392857	1