##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936800.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 128105 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98978962569767 33.0 31.0 34.0 30.0 34.0 2 32.18155419382538 33.0 31.0 34.0 30.0 34.0 3 31.967596893173567 33.0 31.0 34.0 30.0 34.0 4 35.76880683814059 37.0 35.0 37.0 35.0 37.0 5 31.999765817103157 37.0 35.0 37.0 0.0 37.0 6 33.927348659302915 37.0 35.0 37.0 18.0 37.0 7 20.79867296358456 32.0 0.0 37.0 0.0 37.0 8 28.109332188439172 35.0 17.0 37.0 17.0 37.0 9 34.84180945318293 37.0 32.0 39.0 32.0 39.0 10 36.30294680145193 37.0 35.0 39.0 32.0 39.0 11 36.718691698216304 38.0 35.0 39.0 33.0 39.0 12 36.99813434292182 39.0 37.0 39.0 34.0 39.0 13 36.726099683853086 39.0 35.0 39.0 33.0 39.0 14 38.08811521798525 40.0 37.0 41.0 33.0 41.0 15 38.32604504117716 40.0 38.0 41.0 34.0 41.0 16 38.43034229733422 40.0 38.0 41.0 34.0 41.0 17 38.43703212208735 40.0 38.0 41.0 34.0 41.0 18 38.30226767105109 40.0 37.0 41.0 34.0 41.0 19 38.24194996292104 40.0 37.0 41.0 34.0 41.0 20 38.213481128761565 40.0 37.0 41.0 34.0 41.0 21 38.12144725030249 40.0 37.0 41.0 34.0 41.0 22 38.09466453300028 40.0 37.0 41.0 34.0 41.0 23 38.05084110690449 40.0 36.0 41.0 34.0 41.0 24 37.912407790484366 40.0 36.0 41.0 34.0 41.0 25 37.795433433511576 40.0 36.0 41.0 33.0 41.0 26 37.66709339994536 40.0 36.0 41.0 33.0 41.0 27 37.63692283673549 40.0 36.0 41.0 33.0 41.0 28 37.59388782639241 40.0 36.0 41.0 33.0 41.0 29 37.57278794738691 40.0 36.0 41.0 33.0 41.0 30 37.43610319659654 40.0 36.0 41.0 33.0 41.0 31 37.343733655985325 40.0 35.0 41.0 33.0 41.0 32 37.18972717692518 39.0 35.0 41.0 32.0 41.0 33 37.04123960813395 40.0 35.0 41.0 32.0 41.0 34 36.86223800788416 40.0 35.0 41.0 31.0 41.0 35 36.71695093868311 40.0 35.0 41.0 31.0 41.0 36 36.566410366496235 39.0 35.0 41.0 30.0 41.0 37 36.47819366925569 39.0 35.0 41.0 30.0 41.0 38 36.33934662971781 39.0 35.0 41.0 30.0 41.0 39 36.29629600718161 39.0 35.0 41.0 30.0 41.0 40 36.1648179227977 39.0 35.0 41.0 29.0 41.0 41 36.05148120682253 39.0 35.0 40.0 29.0 41.0 42 35.92965145778853 39.0 35.0 40.0 28.0 41.0 43 35.86358065649272 39.0 35.0 40.0 28.0 41.0 44 35.730775535693375 39.0 35.0 40.0 27.0 41.0 45 35.69549197923578 39.0 35.0 40.0 27.0 41.0 46 35.520939854026 38.0 35.0 40.0 26.0 41.0 47 35.521720463682136 38.0 35.0 40.0 26.0 41.0 48 35.437305335467 38.0 35.0 40.0 26.0 41.0 49 35.31827016900199 38.0 34.0 40.0 26.0 41.0 50 35.12378127317435 38.0 34.0 40.0 25.0 41.0 51 33.40973420241208 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 8.0 10 4.0 11 7.0 12 5.0 13 5.0 14 2.0 15 5.0 16 13.0 17 22.0 18 54.0 19 62.0 20 125.0 21 218.0 22 343.0 23 567.0 24 931.0 25 1296.0 26 1590.0 27 1729.0 28 1828.0 29 1999.0 30 2432.0 31 3127.0 32 4196.0 33 6341.0 34 8832.0 35 11416.0 36 13779.0 37 24000.0 38 26179.0 39 16986.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.98590999570665 20.49646774130596 24.811677920455878 13.705944342531517 2 34.78943054525585 24.608719409859102 25.011513992428085 15.59033605245697 3 31.43671207212833 23.504937356075096 28.77951680262285 16.278833769173726 4 27.881035088404044 24.828851332890988 29.219780648686623 18.070332930018342 5 22.366808477420864 36.32332851957379 24.310526521213067 16.99933648179228 6 25.817103157566056 34.91901174817533 26.10905116896296 13.154833925295655 7 47.70149486749151 43.16068849771671 6.439249053510792 2.6985675812809804 8 81.83989695952539 5.799929745130948 9.631942547129308 2.7282307482143553 9 75.94161039772061 7.632801217751063 11.364895983763319 5.060692400764998 10 41.6384996682409 28.178447367393932 18.17571523359744 12.007337730767729 11 32.55766753834745 25.948245579797824 26.009913742632996 15.484173139221733 12 31.27902892158776 23.377697982124037 28.86694508411069 16.47632801217751 13 24.5767144139573 26.594590375082937 30.181491745052885 18.647203465906873 14 17.82522149798993 30.41099098395847 31.00269310331369 20.76109441473791 15 17.854104055267165 28.692088521135005 35.77534054096249 17.678466882635337 16 21.664259786893563 26.639865735139146 34.83548651496819 16.860387962999102 17 21.91639670582725 26.133250068303344 30.61941376214824 21.330939463721165 18 23.554896374068147 26.52511611568635 30.595995472463994 19.323992037781508 19 24.398735412357052 28.272120526130905 28.59763475274189 18.73150930877015 20 27.31275125873307 26.64767183170056 29.220561258342766 16.819015651223605 21 24.53300027321338 26.94118106240974 30.65688302564303 17.868935638733852 22 23.314468599976582 24.304281643963936 30.504664142695447 21.87658561336404 23 22.20209983997502 27.222981148276805 30.761484719565978 19.813434292182194 24 22.032707544592327 24.66804574372585 33.44834315600484 19.850903555676982 25 20.80246672651341 27.9989071464814 30.62409742008509 20.574528706920102 26 20.72908941883611 30.67952070567113 29.46489208071504 19.126497794777723 27 19.6214043167714 31.044065415089182 30.95741774325748 18.377112524881934 28 19.640138948518793 28.621053042426137 32.938605050544474 18.8002029585106 29 19.772061980406697 27.308848210452364 33.154833925295655 19.764255883845284 30 20.932047929432887 28.45166074704344 31.88946567269037 18.7268256508333 31 24.534561492525665 27.018461418367746 29.50860622145896 18.938370867647635 32 23.985012294602086 28.283049061316888 29.685024003746925 18.0469146403341 33 24.429179188946566 27.763943639982823 28.55470122165411 19.252175949416493 34 21.14983802349635 27.430623316810426 30.419577690176027 20.999960969517193 35 21.345771047187853 28.134733226650017 30.208032473361694 20.311463252800436 36 23.090433628663988 28.59295109480504 28.80293509230709 19.513680184223876 37 21.00854767573475 29.787283868701458 29.837242886694508 19.366925568869288 38 21.135787049685806 29.57027438429413 28.33300807930994 20.96093048671012 39 21.00854767573475 29.069122985051326 29.151867608602316 20.770461730611608 40 23.935833886265172 26.30654541196675 30.01053823035791 19.74708247141017 41 19.68151126029429 27.3150930877015 31.282151360212325 21.721244291791887 42 22.468287732719254 27.4696537996175 28.414191483548652 21.647866984114593 43 22.291869950431288 27.979391905077865 28.155029077709692 21.573709066781156 44 20.00078060965614 29.673314858904803 29.661605714062684 20.66429881737637 45 20.587018461418367 30.115139924280864 27.905233987744428 21.39260762655634 46 20.961711096366262 30.379766597712816 28.34003356621521 20.31848873970571 47 20.730650638148393 28.534405370594435 29.424300378595685 21.31064361266149 48 20.75016587955193 26.926349478943056 31.352406229265057 20.97107841223996 49 21.086608641348896 27.49151086998946 30.041762616603567 21.380117872058076 50 19.306818625346395 30.061277858007102 29.916865071620936 20.715038445025566 51 19.581593224308186 29.08395456851801 28.460247453260994 22.874204753912807 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 94.0 1 240.5 2 387.0 3 1163.5 4 1940.0 5 1349.5 6 759.0 7 686.0 8 613.0 9 590.5 10 568.0 11 556.0 12 544.0 13 543.0 14 542.0 15 528.5 16 515.0 17 548.5 18 582.0 19 576.0 20 570.0 21 585.0 22 600.0 23 741.5 24 883.0 25 1111.0 26 1591.5 27 1844.0 28 2163.5 29 2483.0 30 2869.5 31 3256.0 32 3660.5 33 4065.0 34 4556.5 35 5048.0 36 5422.0 37 5796.0 38 6242.0 39 6688.0 40 7411.0 41 8134.0 42 8693.5 43 9253.0 44 9437.0 45 9621.0 46 9539.5 47 9458.0 48 9210.0 49 8962.0 50 8599.5 51 8237.0 52 7478.0 53 6719.0 54 6383.5 55 6048.0 56 5682.5 57 5317.0 58 5019.5 59 4722.0 60 4548.0 61 4374.0 62 3836.0 63 3298.0 64 2647.0 65 1996.0 66 1617.5 67 1239.0 68 995.5 69 752.0 70 565.0 71 378.0 72 308.0 73 238.0 74 178.5 75 84.5 76 50.0 77 43.5 78 37.0 79 25.0 80 13.0 81 12.5 82 12.0 83 8.5 84 5.0 85 5.0 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 128105.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.05928730338395 #Duplication Level Percentage of deduplicated Percentage of total 1 67.26743854445903 27.619530853596657 2 9.372801764292097 7.696811209554662 3 5.1635962660887085 6.360407478240505 4 3.67687598623548 6.03879629991023 5 2.893591132911272 5.940439483236408 6 2.3764710355710186 5.8545724210608485 7 1.9030780052852716 5.469731860583115 8 1.701553261468849 5.589165137972757 9 1.3004049506644613 4.805433043206745 >10 4.325177284739254 23.408141758713555 >50 0.013308237799197705 0.30756020451972993 >100 0.0038023536569136295 0.39733031497599625 >500 0.0019011768284568147 0.5120799344287889 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 656 0.5120799344287889 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 373 0.2911674017407595 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 136 0.10616291323523673 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025760118652667734 0.0 2 0.0 0.0 0.0 0.11474961945279263 0.0 3 0.0 0.0 0.0 0.15846376019671363 0.0 4 0.0 0.0 0.0 0.22169314234417078 0.0 5 0.0 0.0 0.0 0.40357519222512783 0.0 6 0.0 0.0 0.0 0.5237890792709106 0.0 7 0.0 0.0 0.0 0.6486866242535421 0.0 8 0.0 0.0 0.0 0.9343897584013114 0.0 9 0.0 0.0 0.0 1.0186956012645876 0.0 10 0.0 0.0 0.0 1.3418679989071465 0.0 11 0.0 0.0 0.0 1.727489169041021 0.0 12 0.0 0.0 0.0 2.0904726591467937 0.0 13 0.0 0.0 0.0 2.249717028999649 0.0 14 0.0 0.0 0.0 2.3207525077085203 0.0 15 0.0 0.0 0.0 2.442527614066586 0.0 16 0.0 0.0 0.0 2.686858436438859 0.0 17 0.0 0.0 0.0 2.947582061590102 0.0 18 0.0 0.0 0.0 3.2442137309238515 0.0 19 0.0 0.0 0.0 3.449514070489052 0.0 20 0.0 0.0 0.0 3.6743296514577883 0.0 21 0.0 0.0 0.0 3.896022793801959 0.0 22 0.0 0.0 0.0 4.12318020373912 0.0 23 0.0 0.0 0.0 4.3721946840482415 0.0 24 0.0 0.0 0.0 4.568908317395886 0.0 25 0.0 0.0 0.0 4.74922914796456 0.0 26 0.0 0.0 0.0 4.925646930252527 0.0 27 0.0 0.0 0.0 5.123921782912455 0.0 28 0.0 0.0 0.0 5.280043714140744 0.0 29 0.0 0.0 0.0 5.468951250926974 0.0 30 0.0 0.0 0.0 5.703914757425549 0.0 31 0.0 0.0 0.0 5.922485461145154 0.0 32 0.0 0.0 0.0 6.109831778619101 0.0 33 0.0 0.0 0.0 6.31435150852816 0.0 34 0.0 0.0 0.0 6.5173100191249365 0.0 35 0.0 0.0 0.0 6.750712306311229 0.0 36 0.0 0.0 0.0 6.957573865188713 0.0 37 0.0 0.0 0.0 7.1987822489364195 0.0 38 0.0 0.0 0.0 7.443893680964834 0.0 39 0.0 0.0 0.0 7.7444283985792906 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 25 3.8713602E-5 45.000004 3 CACGGGC 25 3.8713602E-5 45.000004 4 TGGGTCT 25 3.8713602E-5 45.000004 6 GCGTAGG 25 3.8713602E-5 45.000004 3 GACCGAT 35 1.2006603E-7 45.0 9 GATCAAT 20 7.009812E-4 45.0 35 CGCGAGG 20 7.009812E-4 45.0 3 ATCAATT 20 7.009812E-4 45.0 36 TATGAGG 20 7.009812E-4 45.0 3 TCAATTG 20 7.009812E-4 45.0 37 AATTGTC 20 7.009812E-4 45.0 39 CTCGCTT 20 7.009812E-4 45.0 41 TTCGGGA 20 7.009812E-4 45.0 4 GCTACGG 20 7.009812E-4 45.0 2 TCGACGT 20 7.009812E-4 45.0 26 ACGACGG 20 7.009812E-4 45.0 2 TTGGGCG 20 7.009812E-4 45.0 5 TGCGTAG 20 7.009812E-4 45.0 2 TGAGGAT 30 2.1503765E-6 44.999996 5 CGTTTTA 140 0.0 43.392857 1 >>END_MODULE