SRR2936799.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936799.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74250
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG	412	0.5548821548821549	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC	371	0.49966329966329964	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	358	0.4821548821548821	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC	314	0.4228956228956229	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG	280	0.3771043771043771	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC	244	0.32861952861952864	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	225	0.30303030303030304	No Hit
GAATCTATCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC	201	0.2707070707070707	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG	97	0.13063973063973064	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCT	78	0.10505050505050505	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCCC	35	1.191529E-7	45.000004	35
CTTCCAT	35	1.191529E-7	45.000004	27
TTTCCGC	35	1.191529E-7	45.000004	33
TCCAGAT	35	1.191529E-7	45.000004	18
AGATTAC	35	1.191529E-7	45.000004	21
AAGGACC	45	3.7471182E-10	45.000004	6
ATTCTCC	35	1.191529E-7	45.000004	14
ATTTCCG	35	1.191529E-7	45.000004	32
ATGGGCT	20	6.9906906E-4	45.0	5
GAGTGAC	25	3.855542E-5	45.0	9
CTCGTAC	20	6.9906906E-4	45.0	29
CAAGTGG	20	6.9906906E-4	45.0	27
GTCTCGT	20	6.9906906E-4	45.0	27
TACGGTT	20	6.9906906E-4	45.0	33
AGTGGCA	20	6.9906906E-4	45.0	29
GCGCAGG	20	6.9906906E-4	45.0	3
CGGGGAT	20	6.9906906E-4	45.0	6
AGTGACG	20	6.9906906E-4	45.0	10
TCTCGTA	20	6.9906906E-4	45.0	28
CGAGGGT	20	6.9906906E-4	45.0	5