##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936799.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 74250 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89830303030303 31.0 31.0 34.0 30.0 34.0 2 32.07313131313131 33.0 31.0 34.0 30.0 34.0 3 31.899461279461278 33.0 31.0 34.0 30.0 34.0 4 35.68608754208754 37.0 35.0 37.0 35.0 37.0 5 31.999474747474746 37.0 35.0 37.0 0.0 37.0 6 33.886383838383836 37.0 35.0 37.0 19.0 37.0 7 20.711973063973065 32.0 0.0 37.0 0.0 37.0 8 27.954047138047137 35.0 17.0 37.0 17.0 37.0 9 34.54183164983165 35.0 32.0 39.0 28.0 39.0 10 36.14051178451179 37.0 35.0 39.0 32.0 39.0 11 36.614612794612796 38.0 35.0 39.0 33.0 39.0 12 36.88731313131313 39.0 35.0 39.0 33.0 39.0 13 36.596148148148146 39.0 35.0 39.0 32.0 39.0 14 37.988417508417506 40.0 37.0 41.0 33.0 41.0 15 38.145952861952864 40.0 37.0 41.0 33.0 41.0 16 38.279649831649834 40.0 37.0 41.0 34.0 41.0 17 38.20847138047138 40.0 37.0 41.0 34.0 41.0 18 38.11547474747475 40.0 37.0 41.0 33.0 41.0 19 38.03894949494949 40.0 37.0 41.0 34.0 41.0 20 38.03189225589226 40.0 36.0 41.0 34.0 41.0 21 37.991367003367 40.0 36.0 41.0 34.0 41.0 22 37.974545454545456 40.0 36.0 41.0 34.0 41.0 23 37.94785185185185 40.0 36.0 41.0 34.0 41.0 24 37.811690235690236 40.0 36.0 41.0 33.0 41.0 25 37.718060606060604 40.0 36.0 41.0 33.0 41.0 26 37.5376835016835 39.0 35.0 41.0 33.0 41.0 27 37.50478114478115 39.0 35.0 41.0 33.0 41.0 28 37.44040404040404 39.0 36.0 41.0 33.0 41.0 29 37.445670033670034 39.0 36.0 41.0 33.0 41.0 30 37.3306936026936 39.0 36.0 41.0 33.0 41.0 31 37.18677441077441 39.0 35.0 41.0 32.0 41.0 32 37.0833265993266 39.0 35.0 41.0 32.0 41.0 33 36.92868686868687 39.0 35.0 41.0 31.0 41.0 34 36.71206734006734 39.0 35.0 41.0 31.0 41.0 35 36.615973063973065 39.0 35.0 41.0 31.0 41.0 36 36.38064646464647 39.0 35.0 41.0 30.0 41.0 37 36.33276767676767 39.0 35.0 41.0 30.0 41.0 38 36.23340067340067 39.0 35.0 40.0 30.0 41.0 39 36.124767676767675 39.0 35.0 40.0 30.0 41.0 40 35.97873400673401 39.0 35.0 40.0 29.0 41.0 41 35.84344781144781 39.0 35.0 40.0 28.0 41.0 42 35.75857239057239 39.0 35.0 40.0 27.0 41.0 43 35.703878787878786 39.0 35.0 40.0 27.0 41.0 44 35.57912457912458 38.0 35.0 40.0 27.0 41.0 45 35.50992592592593 38.0 35.0 40.0 27.0 41.0 46 35.340902356902355 38.0 34.0 40.0 26.0 41.0 47 35.259299663299664 38.0 34.0 40.0 25.0 41.0 48 35.13890909090909 38.0 34.0 40.0 24.0 41.0 49 35.010747474747475 38.0 34.0 40.0 24.0 41.0 50 34.896188552188555 38.0 34.0 40.0 24.0 41.0 51 32.89395286195286 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 1.0 10 2.0 11 3.0 12 5.0 13 0.0 14 0.0 15 2.0 16 4.0 17 14.0 18 31.0 19 38.0 20 91.0 21 129.0 22 210.0 23 303.0 24 519.0 25 724.0 26 892.0 27 1063.0 28 1140.0 29 1299.0 30 1508.0 31 2124.0 32 2828.0 33 4041.0 34 5440.0 35 6912.0 36 8016.0 37 13648.0 38 14158.0 39 9101.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.68956228956229 19.554208754208755 23.33737373737374 14.41885521885522 2 31.468013468013467 27.50976430976431 25.22962962962963 15.792592592592591 3 31.52996632996633 27.105723905723906 26.315151515151513 15.049158249158248 4 28.049831649831653 24.091582491582493 30.177777777777777 17.68080808080808 5 24.04175084175084 36.561616161616165 23.206734006734006 16.18989898989899 6 25.57037037037037 35.90572390572391 24.945454545454545 13.578451178451179 7 45.81414141414141 43.20269360269361 8.290909090909091 2.692255892255892 8 77.51515151515152 8.16969696969697 10.564309764309765 3.7508417508417513 9 69.96902356902356 9.439730639730639 12.363636363636363 8.227609427609428 10 39.76700336700337 28.167003367003367 19.41010101010101 12.655892255892256 11 33.65791245791246 25.003367003367003 25.42491582491582 15.913804713804714 12 31.74949494949495 22.973737373737375 27.39393939393939 17.882828282828285 13 23.13131313131313 26.72996632996633 30.975084175084177 19.163636363636364 14 19.031649831649833 29.6013468013468 29.878787878787875 21.488215488215488 15 17.757575757575758 26.46868686868687 37.31582491582491 18.45791245791246 16 20.334006734006735 26.272053872053874 32.9037037037037 20.49023569023569 17 20.27744107744108 25.663299663299664 30.996632996632993 23.062626262626264 18 21.032996632996635 28.472727272727273 30.777104377104376 19.717171717171716 19 24.215488215488215 27.89360269360269 27.853198653198653 20.037710437710437 20 26.068686868686868 27.34949494949495 29.415488215488217 17.166329966329965 21 23.505723905723904 28.789225589225587 29.22020202020202 18.484848484848484 22 22.0996632996633 25.152861952861954 30.254545454545458 22.492929292929293 23 21.939393939393938 27.718518518518522 30.168350168350166 20.173737373737374 24 21.086868686868687 25.52861952861953 31.637710437710435 21.746801346801348 25 20.102356902356902 29.95690235690236 29.474747474747474 20.465993265993266 26 19.76161616161616 30.626262626262623 28.82154882154882 20.79057239057239 27 20.98181818181818 29.997306397306396 29.797979797979796 19.22289562289562 28 18.647811447811446 27.96902356902357 33.88821548821549 19.494949494949495 29 20.087542087542086 27.699663299663303 30.519865319865318 21.692929292929293 30 20.96969696969697 28.7003367003367 30.54949494949495 19.780471380471383 31 23.705050505050504 26.87946127946128 28.863299663299664 20.552188552188554 32 24.289562289562287 29.880134680134677 27.326599326599325 18.503703703703703 33 22.892929292929292 27.769696969696973 27.816835016835018 21.52053872053872 34 20.973737373737375 27.477441077441078 30.219528619528617 21.32929292929293 35 23.000673400673403 25.504377104377102 28.304377104377103 23.190572390572388 36 22.363636363636363 27.93939393939394 29.309090909090905 20.387878787878787 37 21.671380471380473 29.294276094276096 29.336026936026936 19.698316498316498 38 22.268013468013468 28.676094276094275 27.25925925925926 21.796632996632997 39 22.311111111111114 28.004040404040403 29.393939393939394 20.29090909090909 40 23.45993265993266 26.27878787878788 29.25791245791246 21.003367003367003 41 18.865993265993268 27.75892255892256 29.482828282828283 23.892255892255893 42 19.84781144781145 26.841750841750844 30.004040404040406 23.306397306397304 43 22.541414141414144 26.366329966329964 27.61346801346801 23.47878787878788 44 20.9010101010101 27.9973063973064 28.53872053872054 22.562962962962963 45 19.773737373737372 29.253872053872055 27.354882154882155 23.617508417508418 46 22.556228956228956 30.15218855218855 26.821548821548824 20.47003367003367 47 20.363636363636363 26.412121212121214 31.811447811447813 21.412794612794613 48 21.546127946127946 25.97979797979798 29.443771043771044 23.03030303030303 49 19.84781144781145 25.947474747474747 31.68080808080808 22.523905723905724 50 19.092255892255892 27.66195286195286 29.5003367003367 23.745454545454546 51 20.637037037037036 26.37306397306397 28.119865319865323 24.87003367003367 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 139.0 2 233.0 3 676.5 4 1120.0 5 789.0 6 458.0 7 382.5 8 307.0 9 293.5 10 280.0 11 264.5 12 249.0 13 257.5 14 266.0 15 263.5 16 261.0 17 253.5 18 246.0 19 272.0 20 298.0 21 349.5 22 401.0 23 441.5 24 482.0 25 626.5 26 896.0 27 1021.0 28 1212.0 29 1403.0 30 1691.5 31 1980.0 32 2193.0 33 2406.0 34 2485.0 35 2564.0 36 2553.5 37 2543.0 38 2940.5 39 3338.0 40 3873.5 41 4409.0 42 4723.0 43 5037.0 44 5460.5 45 5884.0 46 6631.5 47 7379.0 48 6324.0 49 5269.0 50 4914.0 51 4559.0 52 4240.0 53 3921.0 54 3601.0 55 3281.0 56 3136.5 57 2992.0 58 3003.5 59 3015.0 60 2862.0 61 2709.0 62 2343.5 63 1978.0 64 1517.5 65 1057.0 66 911.0 67 765.0 68 647.0 69 529.0 70 421.0 71 313.0 72 259.0 73 205.0 74 167.0 75 102.5 76 76.0 77 58.5 78 41.0 79 28.0 80 15.0 81 10.5 82 6.0 83 6.0 84 6.0 85 4.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 74250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.15757575757576 #Duplication Level Percentage of deduplicated Percentage of total 1 68.43694940850743 32.95757575757576 2 11.004838213496658 10.599326599326599 3 6.2868808904550155 9.082828282828283 4 4.29286573258383 8.26936026936027 5 3.070727410017619 7.3939393939393945 6 2.2792739883099813 6.585858585858586 7 1.4906172218027238 5.0249158249158254 8 1.020779148138826 3.932659932659933 9 0.6795872136924239 2.9454545454545453 >10 1.3899376345890315 9.154208754208753 >50 0.025169896803423106 0.8148148148148148 >100 0.02237324160304276 3.239057239057239 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG 412 0.5548821548821549 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 371 0.49966329966329964 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 358 0.4821548821548821 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC 314 0.4228956228956229 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG 280 0.3771043771043771 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 244 0.32861952861952864 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 225 0.30303030303030304 No Hit GAATCTATCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC 201 0.2707070707070707 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG 97 0.13063973063973064 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCT 78 0.10505050505050505 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05117845117845118 0.0 2 0.0 0.0 0.0 0.27205387205387205 0.0 3 0.0 0.0 0.0 0.33535353535353535 0.0 4 0.0 0.0 0.0 0.4861952861952862 0.0 5 0.0 0.0 0.0 1.2215488215488215 0.0 6 0.0 0.0 0.0 1.4047138047138048 0.0 7 0.0 0.0 0.0 1.7265993265993267 0.0 8 0.0 0.0 0.0 2.1858585858585857 0.0 9 0.0 0.0 0.0 2.334006734006734 0.0 10 0.0 0.0 0.0 3.868013468013468 0.0 11 0.0 0.0 0.0 4.378451178451178 0.0 12 0.0 0.0 0.0 5.806060606060606 0.0 13 0.0 0.0 0.0 6.028282828282828 0.0 14 0.0 0.0 0.0 6.136026936026936 0.0 15 0.0 0.0 0.0 6.367676767676768 0.0 16 0.0 0.0 0.0 6.752861952861953 0.0 17 0.0 0.0 0.0 7.1447811447811445 0.0 18 0.0 0.0 0.0 7.536700336700337 0.0 19 0.0 0.0 0.0 7.777777777777778 0.0 20 0.0 0.0 0.0 8.032323232323233 0.0 21 0.0 0.0 0.0 8.334006734006733 0.0 22 0.0 0.0 0.0 8.703030303030303 0.0 23 0.0 0.0 0.0 9.035690235690236 0.0 24 0.0 0.0 0.0 9.309090909090909 0.0 25 0.0 0.0 0.0 9.55016835016835 0.0 26 0.0 0.0 0.0 9.780471380471381 0.0 27 0.0 0.0 0.0 10.03097643097643 0.0 28 0.0 0.0 0.0 10.272053872053872 0.0 29 0.0 0.0 0.0 10.545454545454545 0.0 30 0.0 0.0 0.0 10.864646464646464 0.0 31 0.0 0.0 0.0 11.147474747474748 0.0 32 0.0 0.0 0.0 11.388552188552188 0.0 33 0.0 0.0 0.0 11.643097643097644 0.0 34 0.0 0.0 0.0 11.93131313131313 0.0 35 0.0 0.0 0.0 12.26936026936027 0.0 36 0.0 0.0 0.0 12.562962962962963 0.0 37 0.0 0.0 0.0 12.847138047138047 0.0 38 0.0 0.0 0.0 13.108417508417508 0.0 39 0.0 0.0 0.0 13.3993265993266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCCC 35 1.191529E-7 45.000004 35 CTTCCAT 35 1.191529E-7 45.000004 27 TTTCCGC 35 1.191529E-7 45.000004 33 TCCAGAT 35 1.191529E-7 45.000004 18 AGATTAC 35 1.191529E-7 45.000004 21 AAGGACC 45 3.7471182E-10 45.000004 6 ATTCTCC 35 1.191529E-7 45.000004 14 ATTTCCG 35 1.191529E-7 45.000004 32 ATGGGCT 20 6.9906906E-4 45.0 5 GAGTGAC 25 3.855542E-5 45.0 9 CTCGTAC 20 6.9906906E-4 45.0 29 CAAGTGG 20 6.9906906E-4 45.0 27 GTCTCGT 20 6.9906906E-4 45.0 27 TACGGTT 20 6.9906906E-4 45.0 33 AGTGGCA 20 6.9906906E-4 45.0 29 GCGCAGG 20 6.9906906E-4 45.0 3 CGGGGAT 20 6.9906906E-4 45.0 6 AGTGACG 20 6.9906906E-4 45.0 10 TCTCGTA 20 6.9906906E-4 45.0 28 CGAGGGT 20 6.9906906E-4 45.0 5 >>END_MODULE