SRR2936798.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936798.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	99158
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	472	0.47600798725266746	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCG	313	0.3156578390044172	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	277	0.27935214506141715	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC	247	0.2490974001089171	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCG	176	0.17749450372133363	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGC	175	0.17648601222291696	No Hit
GAATCTATCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC	136	0.13715484378466689	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	130	0.13110389479416687	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGC	119	0.12001048831158352	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	101	0.1018576413400835	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTTAGG	25	3.8649865E-5	45.0	3
GGGTGAG	20	7.0021104E-4	45.0	8
CCCTCGT	25	3.8649865E-5	45.0	14
TCCGCCC	40	6.706614E-9	45.0	35
GTACACT	20	7.0021104E-4	45.0	18
TCATTAA	20	7.0021104E-4	45.0	32
CGTTGGG	20	7.0021104E-4	45.0	3
GTTAGTA	20	7.0021104E-4	45.0	9
TTACTAG	20	7.0021104E-4	45.0	2
TTCCGCC	40	6.706614E-9	45.0	34
CACGAGG	20	7.0021104E-4	45.0	3
TACGGGA	20	7.0021104E-4	45.0	4
TGCGGGA	20	7.0021104E-4	45.0	4
AGGCGAT	25	3.8649865E-5	45.0	7
GACCCAA	20	7.0021104E-4	45.0	9
CGTTATT	35	1.1969678E-7	45.0	1
TGGTTAC	25	3.8649865E-5	45.0	16
TGTTGCC	25	3.8649865E-5	45.0	44
TGCATAG	25	3.8649865E-5	45.0	2
CCCAACC	20	7.0021104E-4	45.0	38