##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936797.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 193938 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95186606028731 31.0 31.0 34.0 30.0 34.0 2 32.13174313440378 33.0 31.0 34.0 30.0 34.0 3 31.94584867328734 33.0 31.0 34.0 30.0 34.0 4 35.73696232816673 37.0 35.0 37.0 35.0 37.0 5 31.9953026224876 37.0 35.0 37.0 0.0 37.0 6 33.90467572110675 37.0 35.0 37.0 19.0 37.0 7 20.75710278542627 32.0 0.0 37.0 0.0 37.0 8 28.090632057667914 35.0 17.0 37.0 17.0 37.0 9 34.79211397456919 37.0 32.0 39.0 32.0 39.0 10 36.23905578071342 37.0 35.0 39.0 32.0 39.0 11 36.650166548072065 38.0 35.0 39.0 33.0 39.0 12 37.027668636368325 39.0 37.0 39.0 34.0 39.0 13 36.856077715558584 39.0 37.0 39.0 33.0 39.0 14 38.28436407511679 40.0 38.0 41.0 34.0 41.0 15 38.42221740968763 40.0 38.0 41.0 34.0 41.0 16 38.498370613288785 40.0 38.0 41.0 34.0 41.0 17 38.4304984067073 40.0 38.0 41.0 34.0 41.0 18 38.297904484938485 40.0 37.0 41.0 34.0 41.0 19 38.27773824624364 40.0 37.0 41.0 34.0 41.0 20 38.251688684012414 40.0 37.0 41.0 34.0 41.0 21 38.195681093957866 40.0 37.0 41.0 34.0 41.0 22 38.15994802462642 40.0 37.0 41.0 34.0 41.0 23 38.126622941352394 40.0 37.0 41.0 34.0 41.0 24 38.05383679320195 40.0 37.0 41.0 34.0 41.0 25 37.90401571636296 40.0 36.0 41.0 33.0 41.0 26 37.78096092565665 40.0 36.0 41.0 33.0 41.0 27 37.7599284307356 40.0 36.0 41.0 33.0 41.0 28 37.669064340149944 40.0 36.0 41.0 33.0 41.0 29 37.648145283544224 40.0 36.0 41.0 33.0 41.0 30 37.49825201868639 40.0 36.0 41.0 33.0 41.0 31 37.3691282781095 40.0 36.0 41.0 33.0 41.0 32 37.26757520444678 40.0 36.0 41.0 32.0 41.0 33 37.10216151553589 40.0 36.0 41.0 31.0 41.0 34 36.895028308015966 40.0 36.0 41.0 31.0 41.0 35 36.76706473202776 40.0 35.0 41.0 30.0 41.0 36 36.61708896657695 40.0 35.0 41.0 30.0 41.0 37 36.56782579999794 39.0 35.0 41.0 30.0 41.0 38 36.469232435108125 39.0 35.0 41.0 30.0 41.0 39 36.407104332312386 39.0 35.0 41.0 30.0 41.0 40 36.31864822778414 39.0 35.0 41.0 29.0 41.0 41 36.19552124905898 39.0 35.0 41.0 29.0 41.0 42 36.12437995648094 39.0 35.0 41.0 29.0 41.0 43 36.044230630407654 39.0 35.0 40.0 28.0 41.0 44 35.934056244779256 39.0 35.0 40.0 28.0 41.0 45 35.89032061792944 39.0 35.0 40.0 27.0 41.0 46 35.73984469263373 39.0 35.0 40.0 27.0 41.0 47 35.68911198424239 39.0 35.0 40.0 26.0 41.0 48 35.611417050810054 39.0 35.0 40.0 26.0 41.0 49 35.47858593983644 39.0 35.0 40.0 26.0 41.0 50 35.3506275201353 38.0 34.0 40.0 26.0 41.0 51 33.567758768266145 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 8.0 11 8.0 12 6.0 13 1.0 14 4.0 15 6.0 16 15.0 17 28.0 18 52.0 19 122.0 20 212.0 21 374.0 22 612.0 23 890.0 24 1398.0 25 1988.0 26 2338.0 27 2504.0 28 2669.0 29 2973.0 30 3685.0 31 4726.0 32 6231.0 33 8730.0 34 12273.0 35 15797.0 36 21234.0 37 37315.0 38 40664.0 39 27056.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.80769111777991 20.17397312543184 24.8136002227516 13.204735534036653 2 32.958986892718286 25.057492600728065 25.379760542028894 16.603759964524745 3 31.197083604038404 24.911569676907053 28.039889036702455 15.851457682352091 4 27.352040342789962 24.99458589858615 29.33205457414225 18.321319184481638 5 22.514411822334974 38.02658581608555 23.56732564015304 15.891676721426434 6 25.648403097897265 35.52733347770937 26.14804731409007 12.676216110303292 7 48.67019356701626 42.92763666738855 6.051934123276511 2.350235642318679 8 84.27590260804999 4.832472233394178 8.510451793872269 2.3811733646835584 9 77.42732213387784 8.636265198156112 9.644834947251184 4.2915777207148675 10 37.565098124142764 34.973032618671944 16.517649970609163 10.944219286576121 11 28.59986181150677 27.355649743732535 28.581814806793925 15.462673637966773 12 27.47991626189813 24.746568490961028 30.58864173086244 17.184873516278397 13 23.722529880683517 26.04646845899205 31.499757654508144 18.73124400581629 14 20.192020130144687 29.320710742608462 30.486547247058336 20.000721880188514 15 19.197887984819893 29.392898761459847 34.176901896482384 17.23231135723788 16 23.145541358578512 28.07082675906733 31.824088110633298 16.95954377172086 17 22.774804318906043 27.955841557611194 29.428992770885543 19.84036135259722 18 23.282698594396148 28.41732924955398 30.388577792902886 17.911394363146986 19 23.94528148171065 29.74868256865596 28.463220204395217 17.84281574523817 20 25.049758170136847 28.653487196939224 29.43982097371325 16.856933659210675 21 24.64550526456909 27.18703915684394 30.63143891346719 17.53601666511978 22 23.703451618558507 25.73451309181285 30.676814239602347 19.885221050026296 23 21.678577689777146 27.36957171879673 31.416225804122966 19.535624787303156 24 22.00703317555095 26.414111726428036 32.23607544679227 19.342779651228742 25 20.888118883354473 29.526962225040993 30.013200094875682 19.571718796728852 26 20.863884334168652 31.022801101382917 28.660190370118283 19.453124194330147 27 20.65299219338139 30.507688024007674 30.337014922294752 18.502304860316183 28 19.73104806690798 29.81519867174045 32.00043312811311 18.453320133238456 29 21.301137476925618 28.198702678175497 31.091379719291734 19.40878012560715 30 20.885025111117987 28.131155317678846 31.372912992812136 19.61090657839103 31 22.304550938959874 28.88809825820623 29.068568305334697 19.7387824974992 32 22.729944621476967 29.42693025606122 29.89512112118306 17.948004001278758 33 22.437067516422772 29.397023791108502 29.009786632841422 19.156122059627304 34 21.509967102888552 29.189225422557723 30.102919489733832 19.197887984819893 35 21.547092369726407 28.17498375769576 29.54707174457816 20.73085212799967 36 21.697655951902153 30.672689209953695 28.92006723798327 18.709587600160877 37 21.22173065618909 30.917097216636247 29.20881931338882 18.65235281378585 38 21.07168270271943 29.904402437892525 28.36937577988842 20.654539079499635 39 22.562365292000536 28.61481504398313 28.737019047324402 20.08580061669193 40 22.59124049954109 28.13992100568223 30.07816931184193 19.19066918293475 41 20.464787715661707 29.07733399333808 29.678041435922818 20.779836855077395 42 21.309903164928997 28.690612463777082 29.57749383823696 20.421990533056956 43 22.246284895172682 28.90408274809475 28.30028153327352 20.549350823459044 44 21.271231011972898 29.139209438067837 28.411657333787087 21.17790221617218 45 20.918540977013272 29.26141344140911 28.103826996256537 21.71621858532108 46 21.32330951128711 30.14468541492642 28.205921480060635 20.32608359372583 47 21.115511142736338 28.652455939527066 29.96421536779796 20.26781754993864 48 21.43932597015541 27.70524600645567 29.85696459693304 20.998463426455878 49 21.024244861759943 28.198702678175497 29.939465189906052 20.837587270158505 50 19.4572492239788 29.310398168486834 29.517680908331528 21.71467169920284 51 20.5395538780435 28.18632758922955 29.279976074828042 21.994142457898917 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 80.0 1 271.5 2 463.0 3 1371.5 4 2280.0 5 1648.5 6 1017.0 7 898.5 8 780.0 9 767.0 10 754.0 11 758.0 12 762.0 13 744.0 14 726.0 15 700.0 16 674.0 17 727.0 18 780.0 19 807.5 20 835.0 21 952.0 22 1069.0 23 1282.5 24 1496.0 25 1860.5 26 2731.5 27 3238.0 28 3986.5 29 4735.0 30 5228.5 31 5722.0 32 6173.0 33 6624.0 34 7724.0 35 8824.0 36 9298.0 37 9772.0 38 10211.0 39 10650.0 40 11331.0 41 12012.0 42 12760.0 43 13508.0 44 14051.0 45 14594.0 46 14851.5 47 15109.0 48 14592.0 49 14075.0 50 13316.0 51 12557.0 52 11551.0 53 10545.0 54 9716.5 55 8888.0 56 8292.0 57 7696.0 58 7209.0 59 6722.0 60 6083.0 61 5444.0 62 4575.0 63 3706.0 64 3043.0 65 2380.0 66 1829.0 67 1278.0 68 1024.0 69 770.0 70 666.5 71 563.0 72 414.0 73 265.0 74 204.0 75 110.5 76 78.0 77 63.0 78 48.0 79 34.5 80 21.0 81 16.0 82 11.0 83 10.0 84 9.0 85 7.0 86 5.0 87 4.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 193938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.56578906660892 #Duplication Level Percentage of deduplicated Percentage of total 1 67.88730764780748 30.25451432932174 2 10.114543561263451 9.015252297125885 3 5.621890547263682 7.516319648547475 4 3.7591114196459565 6.7011106642329 5 2.912183269698022 6.489187266033475 6 2.3140113386555594 6.1875444729759 7 1.807242855489992 5.637884272293207 8 1.4520421150063636 5.1769122090565025 9 1.0447761194029852 4.190514494322928 >10 3.066065023718616 17.53498540770762 >50 0.011570056693277797 0.3588775794326022 >100 0.008099039685294459 0.6094731305881261 >500 0.0011570056693277796 0.32742422836164137 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 635 0.32742422836164137 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 351 0.18098567583454506 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCGTCTTC 195 0.10054759768585836 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022172034361496975 0.0 2 0.0 0.0 0.0 0.13561034969938845 0.0 3 0.0 0.0 0.0 0.1835638193649517 0.0 4 0.0 0.0 0.0 0.24440800668254803 0.0 5 0.0 0.0 0.0 0.48726912724685206 0.0 6 0.0 0.0 0.0 0.7038331838010086 0.0 7 0.0 0.0 0.0 0.804380781486867 0.0 8 0.0 0.0 0.0 1.0389918427538698 0.0 9 0.0 0.0 0.0 1.1055079458383608 0.0 10 0.0 0.0 0.0 1.4638698965648815 0.0 11 0.0 0.0 0.0 1.7412781404366344 0.0 12 0.0 0.0 0.0 2.112015180109107 0.0 13 0.0 0.0 0.0 2.2393754705111943 0.0 14 0.0 0.0 0.0 2.315172890305149 0.0 15 0.0 0.0 0.0 2.408501686105869 0.0 16 0.0 0.0 0.0 2.577112272994462 0.0 17 0.0 0.0 0.0 2.8091451907310585 0.0 18 0.0 0.0 0.0 3.057678227062257 0.0 19 0.0 0.0 0.0 3.220616898183956 0.0 20 0.0 0.0 0.0 3.3897431137786302 0.0 21 0.0 0.0 0.0 3.5836195072652086 0.0 22 0.0 0.0 0.0 3.80998050923491 0.0 23 0.0 0.0 0.0 4.065216718745166 0.0 24 0.0 0.0 0.0 4.282812032711485 0.0 25 0.0 0.0 0.0 4.446266332539265 0.0 26 0.0 0.0 0.0 4.598376800833256 0.0 27 0.0 0.0 0.0 4.7711124173704995 0.0 28 0.0 0.0 0.0 4.944363662613825 0.0 29 0.0 0.0 0.0 5.145458857985542 0.0 30 0.0 0.0 0.0 5.372335488661324 0.0 31 0.0 0.0 0.0 5.599212119337108 0.0 32 0.0 0.0 0.0 5.784322824820303 0.0 33 0.0 0.0 0.0 6.007074425847436 0.0 34 0.0 0.0 0.0 6.2071383638069895 0.0 35 0.0 0.0 0.0 6.454124514019944 0.0 36 5.15628706081325E-4 0.0 0.0 6.686673060462622 0.0 37 5.15628706081325E-4 0.0 0.0 6.93881549773639 0.0 38 5.15628706081325E-4 0.0 0.0 7.197661108189215 0.0 39 5.15628706081325E-4 0.0 0.0 7.462694263115016 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCACCGG 20 7.01877E-4 45.000004 20 TCTCGGT 20 7.01877E-4 45.000004 45 GTCAACC 20 7.01877E-4 45.000004 16 GGGTTCG 20 7.01877E-4 45.000004 8 AATACGG 20 7.01877E-4 45.000004 2 AGGTATC 25 3.8787788E-5 45.0 7 ACACGGG 25 3.8787788E-5 45.0 3 CACGGGA 35 1.2049532E-7 45.0 4 CGACGGG 45 3.8198777E-10 45.0 3 CGTTGAG 25 3.8787788E-5 45.0 2 ATTACGG 25 3.8787788E-5 45.0 2 GCACGAA 30 2.1561427E-6 44.999996 1 CGTTTTA 185 0.0 43.783783 1 CGTTATT 100 0.0 42.75 1 AGGCGAT 50 1.0713848E-9 40.5 7 ACGGGAG 90 0.0 40.0 5 TGCGGGA 85 0.0 39.705883 4 GGCGATT 40 3.4384357E-7 39.375004 8 ATACGGG 40 3.4384357E-7 39.375004 3 GTGCGGG 75 0.0 39.0 3 >>END_MODULE