SRR2936794.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936794.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102761
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG	595	0.5790134389505746	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	492	0.4787808604431642	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	474	0.4612644875001216	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG	296	0.28804702173003377	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC	273	0.265664989636146	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	272	0.264691857805977	No Hit
GAATCTATCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	241	0.23452477107073696	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC	176	0.1712712021097498	No Hit
GAATATGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	130	0.1265071379219743	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTT	124	0.12066834694096008	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG	121	0.117748951450453	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCT	114	0.11093702863926977	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTACT	30	2.1461892E-6	45.000004	7
GAAAGGC	35	1.1975499E-7	45.000004	4
CTAGTCT	30	2.1461892E-6	45.000004	28
TCCAATG	35	1.1975499E-7	45.000004	16
TAAGGGT	30	2.1461892E-6	45.000004	5
GGCGATG	30	2.1461892E-6	45.000004	8
CACTTAC	30	2.1461892E-6	45.000004	37
TTTAGGC	20	7.003304E-4	45.0	37
GGGTGTA	25	3.8659742E-5	45.0	8
GGTACTT	20	7.003304E-4	45.0	8
GCAAGGT	20	7.003304E-4	45.0	4
GCGACTG	20	7.003304E-4	45.0	11
CTCGTAC	25	3.8659742E-5	45.0	29
ATAGGTA	25	3.8659742E-5	45.0	5
CGACGTT	20	7.003304E-4	45.0	27
ACGTTTT	20	7.003304E-4	45.0	29
GAAGACG	25	3.8659742E-5	45.0	45
TTTCGAC	20	7.003304E-4	45.0	24
TATGGGC	25	3.8659742E-5	45.0	4
TGGGTAC	25	3.8659742E-5	45.0	6