##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936794.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 102761 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.830529091776064 31.0 31.0 34.0 30.0 34.0 2 31.99792722920174 33.0 31.0 34.0 30.0 34.0 3 31.80185089674098 33.0 31.0 34.0 30.0 34.0 4 35.64147877112912 37.0 35.0 37.0 35.0 37.0 5 31.910218857348607 37.0 35.0 37.0 0.0 37.0 6 33.80430318895301 37.0 35.0 37.0 19.0 37.0 7 20.861494146612042 32.0 0.0 37.0 0.0 37.0 8 28.028454374714144 35.0 17.0 37.0 17.0 37.0 9 34.63005420344294 35.0 32.0 39.0 28.0 39.0 10 36.09467599575714 37.0 35.0 39.0 32.0 39.0 11 36.51263611681475 37.0 35.0 39.0 32.0 39.0 12 36.79327760531719 39.0 35.0 39.0 33.0 39.0 13 36.41649069199404 39.0 35.0 39.0 32.0 39.0 14 37.82897208084779 40.0 37.0 41.0 33.0 41.0 15 38.00902093206567 40.0 37.0 41.0 33.0 41.0 16 38.163126088691236 40.0 37.0 41.0 34.0 41.0 17 38.088399295452554 40.0 36.0 41.0 33.0 41.0 18 37.947976372359165 40.0 36.0 41.0 33.0 41.0 19 37.89934897480562 40.0 36.0 41.0 34.0 41.0 20 37.9015385214235 40.0 36.0 41.0 34.0 41.0 21 37.833711232860715 39.0 36.0 41.0 33.0 41.0 22 37.80246396979399 39.0 36.0 41.0 33.0 41.0 23 37.826403012816144 39.0 36.0 41.0 34.0 41.0 24 37.685590836990684 39.0 35.0 41.0 33.0 41.0 25 37.572843783147306 39.0 35.0 41.0 33.0 41.0 26 37.42942361401699 39.0 35.0 41.0 33.0 41.0 27 37.431175251311295 39.0 35.0 41.0 33.0 41.0 28 37.39984040637985 39.0 35.0 41.0 33.0 41.0 29 37.367435116435225 39.0 35.0 41.0 33.0 41.0 30 37.2647989023073 39.0 35.0 41.0 33.0 41.0 31 37.09713801928747 39.0 35.0 41.0 32.0 41.0 32 36.770136530395774 39.0 35.0 41.0 31.0 41.0 33 36.61390994638044 39.0 35.0 41.0 31.0 41.0 34 36.333988575432315 39.0 35.0 41.0 30.0 41.0 35 36.16112143712109 39.0 35.0 41.0 30.0 41.0 36 35.998919823668516 39.0 35.0 40.0 29.0 41.0 37 35.81877365926762 39.0 35.0 40.0 27.0 41.0 38 35.72470100524518 39.0 35.0 40.0 27.0 41.0 39 35.34840065783712 39.0 35.0 40.0 24.0 41.0 40 35.135099891982364 38.0 34.0 40.0 24.0 41.0 41 34.94190402973891 38.0 34.0 40.0 23.0 41.0 42 34.958165062621035 38.0 34.0 40.0 23.0 41.0 43 34.75553955294324 38.0 34.0 40.0 23.0 41.0 44 34.54291024805131 38.0 34.0 40.0 21.0 41.0 45 34.551892254843764 38.0 34.0 40.0 22.0 41.0 46 34.21220112688666 38.0 33.0 40.0 19.0 41.0 47 34.07090238514611 38.0 33.0 40.0 18.0 41.0 48 33.91656367688131 38.0 33.0 40.0 17.0 41.0 49 33.80529578341978 38.0 33.0 40.0 15.0 41.0 50 33.77471024999757 38.0 33.0 40.0 17.0 41.0 51 31.665495664697698 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 3.0 12 2.0 13 2.0 14 8.0 15 6.0 16 6.0 17 18.0 18 27.0 19 63.0 20 128.0 21 205.0 22 356.0 23 604.0 24 1010.0 25 1479.0 26 1782.0 27 1916.0 28 2114.0 29 2261.0 30 2603.0 31 3077.0 32 3966.0 33 5402.0 34 7750.0 35 9356.0 36 10476.0 37 17491.0 38 18641.0 39 12004.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.7990969336616 17.223460262161716 22.685649224900498 15.291793579276183 2 32.07637138603167 29.57639571432742 23.291910355095805 15.05532254454511 3 29.27180545148451 27.823785288192994 27.60385749457479 15.300551765747706 4 27.06863498798182 22.921147127801405 32.27489027938615 17.735327604830626 5 23.081713879779294 34.80114051050496 24.298128667490584 17.81901694222516 6 23.116746625665378 34.79238232403344 28.71225464913732 13.378616401163864 7 45.37616410895184 42.501532682632515 9.221397222681757 2.9009059857338872 8 76.80832222341161 7.4785181148490185 11.732077344517862 3.981082317221514 9 71.20600227712848 7.421103336869046 12.046398925662459 9.326495460340013 10 40.31587859207287 24.842109360555074 20.89411352555931 13.947898521812748 11 31.466217728515684 25.439612304278857 27.418962446842677 15.675207520362783 12 31.815572055546365 23.065170638666423 29.19395490507099 15.925302400716227 13 22.528001868413114 27.700197545761522 30.806434347661078 18.965366238164282 14 15.843559326982026 33.99636048695517 29.491733245102715 20.66834694096009 15 15.207131110051478 28.14978445129962 40.652582205311354 15.99050223333755 16 17.975691166882378 27.016085869152697 35.29257208474032 19.715650879224608 17 17.276009380990843 26.866223567306662 29.572503187006742 26.28526386469575 18 18.848590418544 29.559852473214548 32.11140413191775 19.4801529763237 19 21.59379531145084 29.90628740475472 27.056957406019794 21.44295987777464 20 23.361975846867974 27.29440157258104 32.31770807991359 17.025914500637402 21 21.465341909868528 30.10091377078853 30.708148032814 17.725596286528937 22 20.039703778670898 25.00754177168381 29.548174891252515 25.404579558392776 23 18.942011074240227 28.474810482576075 31.52655190198616 21.056626541197538 24 20.411440137795466 24.56573992078707 33.1750372222925 21.847782719124957 25 17.928980839034264 31.009818900166408 30.777240392756006 20.283959868043326 26 17.488152119967694 30.434697988536506 29.67565516100466 22.40149473049114 27 19.687430056149708 32.01019842158017 28.00478780860443 20.29758371366569 28 15.398838080594778 28.638296630044476 34.58121271688675 21.381652572473993 29 17.697375463454033 25.822053113535294 32.33327818919629 24.147293233814384 30 17.51831920670293 27.62040073568766 31.549907065910222 23.311372991699187 31 21.97915551619778 27.154270589036695 27.667111063535778 23.19946283122975 32 22.405387257811814 26.36408754293944 31.373770204649627 19.856754994599118 33 20.83085995659832 28.023277313377644 28.72101283560884 22.424849894415196 34 20.667373809129924 26.652134564669478 29.392473798425474 23.28801782777513 35 19.304989246893275 24.296182403830247 32.830548554412665 23.568279794863813 36 21.983048043518455 28.172166483393507 28.232500656863984 21.612284816224054 37 18.814530804488083 29.112211831336793 32.173684569048575 19.899572795126556 38 17.40057025525248 28.65581300298751 30.17292552622104 23.77069121553897 39 22.34213368885083 26.87887428109886 30.07074668405329 20.70824534599702 40 22.02683897587606 24.868383919969638 33.48741253977676 19.61736456437754 41 18.484639114060784 29.351602261558373 29.177411663958114 22.98634696042273 42 19.608606377906014 25.38025126263855 31.551853329570555 23.45928902988488 43 20.03386498768988 28.095289068810153 27.910394021078034 23.960451922421928 44 19.841184885316412 27.732310896157102 29.700956588589055 22.725547629937427 45 18.876811241618903 29.34479033874719 27.60191123091445 24.176487188719456 46 21.329103453644866 30.27802376387929 27.700197545761522 20.692675236714315 47 20.232383881044367 25.997216842965713 32.079290781522175 21.691108494467745 48 21.239575325269314 24.739930518387325 31.301758449217115 22.718735707126246 49 18.62574322943529 25.388036317279898 32.024795399032705 23.9614250542521 50 17.636068158153385 26.640456982707448 32.49287180934401 23.230603049795157 51 18.79701443154504 26.60055857767052 29.78853845330427 24.81388853748017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 176.0 2 294.0 3 940.0 4 1586.0 5 1131.0 6 676.0 7 620.0 8 564.0 9 535.5 10 507.0 11 481.5 12 456.0 13 431.5 14 407.0 15 377.5 16 348.0 17 357.5 18 367.0 19 380.0 20 393.0 21 393.0 22 393.0 23 448.5 24 504.0 25 714.5 26 1098.0 27 1271.0 28 1596.0 29 1921.0 30 2268.5 31 2616.0 32 2959.5 33 3303.0 34 3508.5 35 3714.0 36 3851.0 37 3988.0 38 4362.5 39 4737.0 40 5689.0 41 6641.0 42 7459.0 43 8277.0 44 8916.5 45 9556.0 46 10303.5 47 11051.0 48 9647.0 49 8243.0 50 7636.0 51 7029.0 52 6162.0 53 5295.0 54 4544.0 55 3793.0 56 3587.0 57 3381.0 58 3219.0 59 3057.0 60 2830.5 61 2604.0 62 2349.5 63 2095.0 64 1615.0 65 1135.0 66 810.0 67 485.0 68 435.5 69 386.0 70 336.0 71 286.0 72 240.0 73 194.0 74 151.0 75 73.0 76 38.0 77 29.0 78 20.0 79 21.0 80 22.0 81 20.0 82 18.0 83 13.0 84 8.0 85 5.0 86 2.0 87 3.0 88 4.0 89 3.0 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 102761.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.90775683381828 #Duplication Level Percentage of deduplicated Percentage of total 1 71.76979640838377 27.924017866700403 2 7.513381021459657 5.84657603565555 3 3.9517783002351057 4.612644875001217 4 2.8362763243459557 4.414125981646733 5 2.0734330448701916 4.033631436050642 6 1.853334000300135 4.326544116931521 7 1.470661797809014 4.00541061297574 8 1.4281426641988895 4.445266200212142 9 1.2055424941223551 4.221445879273265 >10 5.820119053574109 31.605375580229854 >50 0.047521384623080386 1.3458413211237725 >100 0.027512380571257065 2.640106655248587 >500 0.002501125506477915 0.5790134389505746 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG 595 0.5790134389505746 No Hit GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 492 0.4787808604431642 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 474 0.4612644875001216 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG 296 0.28804702173003377 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC 273 0.265664989636146 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 272 0.264691857805977 No Hit GAATCTATCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 241 0.23452477107073696 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC 176 0.1712712021097498 No Hit GAATATGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 130 0.1265071379219743 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTT 124 0.12066834694096008 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG 121 0.117748951450453 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCT 114 0.11093702863926977 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04476406418777552 0.0 2 0.0 0.0 0.0 0.3950915230486274 0.0 3 0.0 0.0 0.0 0.471968937631981 0.0 4 0.0 0.0 0.0 0.7269294771362677 0.0 5 0.0 0.0 0.0 2.036764920543786 0.0 6 0.0 0.0 0.0 2.627455941456389 0.0 7 0.0 0.0 0.0 3.094559219937525 0.0 8 0.0 0.0 0.0 3.7864559511877074 0.0 9 0.0 0.0 0.0 3.9197750119208647 0.0 10 0.0 0.0 0.0 5.945835482332791 0.0 11 0.0 0.0 0.0 6.505386284679986 0.0 12 0.0 0.0 0.0 7.784081509522095 0.0 13 0.0 0.0 0.0 8.145113418514807 0.0 14 0.0 0.0 0.0 8.313465225134049 0.0 15 0.0 0.0 0.0 8.551882523525462 0.0 16 0.0 0.0 0.0 8.877881686632088 0.0 17 0.0 0.0 0.0 9.190257004116347 0.0 18 0.0 0.0 0.0 9.647628964295793 0.0 19 0.0 0.0 0.0 9.85198664863129 0.0 20 0.0 0.0 0.0 10.07386070590983 0.0 21 0.0 0.0 0.0 10.344391354696821 0.0 22 0.0 0.0 0.0 10.693745681727505 0.0 23 0.0 0.0 0.0 11.008067262872101 0.0 24 0.0 0.0 0.0 11.266920329697063 0.0 25 0.0 0.0 0.0 11.520907737371182 0.0 26 0.0 0.0 0.0 11.76419069491344 0.0 27 0.0 0.0 0.0 11.991903543172993 0.0 28 0.0 0.0 0.0 12.18555677737663 0.0 29 0.0 0.0 0.0 12.410350230145678 0.0 30 0.0 0.0 0.0 12.674068956121486 0.0 31 0.0 0.0 0.0 12.95141152771966 0.0 32 0.0 0.0 0.0 13.19274822160158 0.0 33 0.0 0.0 0.0 13.401971565087923 0.0 34 0.0 0.0 0.0 13.620926226875955 0.0 35 0.0 0.0 0.0 13.878806161870749 0.0 36 0.0 0.0 0.0 14.121115987582838 0.0 37 0.0 0.0 0.0 14.326446803748503 0.0 38 0.0 0.0 0.0 14.586273002403635 0.0 39 0.0 0.0 0.0 14.796469477720146 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGTACT 30 2.1461892E-6 45.000004 7 GAAAGGC 35 1.1975499E-7 45.000004 4 CTAGTCT 30 2.1461892E-6 45.000004 28 TCCAATG 35 1.1975499E-7 45.000004 16 TAAGGGT 30 2.1461892E-6 45.000004 5 GGCGATG 30 2.1461892E-6 45.000004 8 CACTTAC 30 2.1461892E-6 45.000004 37 TTTAGGC 20 7.003304E-4 45.0 37 GGGTGTA 25 3.8659742E-5 45.0 8 GGTACTT 20 7.003304E-4 45.0 8 GCAAGGT 20 7.003304E-4 45.0 4 GCGACTG 20 7.003304E-4 45.0 11 CTCGTAC 25 3.8659742E-5 45.0 29 ATAGGTA 25 3.8659742E-5 45.0 5 CGACGTT 20 7.003304E-4 45.0 27 ACGTTTT 20 7.003304E-4 45.0 29 GAAGACG 25 3.8659742E-5 45.0 45 TTTCGAC 20 7.003304E-4 45.0 24 TATGGGC 25 3.8659742E-5 45.0 4 TGGGTAC 25 3.8659742E-5 45.0 6 >>END_MODULE