SRR2936792.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936792.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	107208
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	585	0.5456682337139019	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	339	0.3162077456906201	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	122	0.11379747780016418	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGGT	20	7.004669E-4	45.0	5
TCACAAT	25	3.8671038E-5	45.0	41
GACGTTT	20	7.004669E-4	45.0	28
TTTCGAC	20	7.004669E-4	45.0	24
ATATGCT	25	3.8671038E-5	45.0	34
ACGGGAA	20	7.004669E-4	45.0	5
TGCGAAG	35	1.1982047E-7	45.0	2
TTGACGG	20	7.004669E-4	45.0	2
CACAATT	25	3.8671038E-5	45.0	42
TCGACGT	20	7.004669E-4	45.0	26
TTCGACG	20	7.004669E-4	45.0	25
ACATGAT	30	2.1470678E-6	44.999996	31
CGTTTTT	215	0.0	41.860466	1
CGTTATT	65	0.0	41.538464	1
CGTTTTA	105	0.0	38.57143	1
CTAGATA	35	6.195449E-6	38.571426	19
TATCACA	35	6.195449E-6	38.571426	39
CATGATT	35	6.195449E-6	38.571426	32
TTATCAC	35	6.195449E-6	38.571426	38
AACGGGA	35	6.195449E-6	38.571426	4