##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936791.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 266690 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.998267651580488 33.0 31.0 34.0 30.0 34.0 2 32.187536090592076 33.0 31.0 34.0 30.0 34.0 3 31.973302336045595 33.0 31.0 34.0 30.0 34.0 4 35.77728823727924 37.0 35.0 37.0 35.0 37.0 5 32.04572349919382 37.0 35.0 37.0 0.0 37.0 6 33.94518729611159 37.0 35.0 37.0 19.0 37.0 7 20.70856425062807 32.0 0.0 37.0 0.0 37.0 8 28.054006524429113 35.0 17.0 37.0 17.0 37.0 9 34.81939330308598 37.0 32.0 39.0 32.0 39.0 10 36.28841726348944 37.0 35.0 39.0 32.0 39.0 11 36.719929506168214 38.0 37.0 39.0 33.0 39.0 12 37.06089467171623 39.0 37.0 39.0 34.0 39.0 13 36.83758296149087 39.0 37.0 39.0 33.0 39.0 14 38.181806591923205 40.0 38.0 41.0 33.0 41.0 15 38.38271776219581 40.0 38.0 41.0 34.0 41.0 16 38.46691664479358 40.0 38.0 41.0 34.0 41.0 17 38.43950654317747 40.0 38.0 41.0 34.0 41.0 18 38.3341782594023 40.0 38.0 41.0 34.0 41.0 19 38.2669353931531 40.0 37.0 41.0 34.0 41.0 20 38.24525853987776 40.0 37.0 41.0 34.0 41.0 21 38.157647455847616 40.0 37.0 41.0 34.0 41.0 22 38.118043421200646 40.0 37.0 41.0 34.0 41.0 23 38.07915932355919 40.0 37.0 41.0 34.0 41.0 24 37.93799917507218 40.0 36.0 41.0 33.0 41.0 25 37.82460909670404 40.0 36.0 41.0 33.0 41.0 26 37.676418313397576 40.0 36.0 41.0 33.0 41.0 27 37.622614271251265 40.0 36.0 41.0 33.0 41.0 28 37.54132513405077 40.0 36.0 41.0 33.0 41.0 29 37.523300461209644 40.0 36.0 41.0 33.0 41.0 30 37.36114589973377 40.0 36.0 41.0 33.0 41.0 31 37.259548539502795 40.0 35.0 41.0 32.0 41.0 32 37.14249128201283 40.0 35.0 41.0 32.0 41.0 33 36.967902808504256 39.0 35.0 41.0 31.0 41.0 34 36.778458134913194 39.0 35.0 41.0 31.0 41.0 35 36.611713975027186 39.0 35.0 41.0 30.0 41.0 36 36.43642806254453 39.0 35.0 41.0 30.0 41.0 37 36.36854775207169 39.0 35.0 41.0 30.0 41.0 38 36.23101728598748 39.0 35.0 41.0 29.0 41.0 39 36.13957778694364 39.0 35.0 41.0 29.0 41.0 40 35.99202069818891 39.0 35.0 41.0 28.0 41.0 41 35.82856500056245 39.0 35.0 40.0 27.0 41.0 42 35.7517717199745 39.0 35.0 40.0 27.0 41.0 43 35.69941880085493 39.0 35.0 40.0 27.0 41.0 44 35.54079643031235 39.0 35.0 40.0 26.0 41.0 45 35.46748284525104 38.0 35.0 40.0 26.0 41.0 46 35.32503655930106 38.0 34.0 40.0 26.0 41.0 47 35.26627545089805 38.0 34.0 40.0 25.0 41.0 48 35.13315834864449 38.0 34.0 40.0 24.0 41.0 49 35.02635269413926 38.0 34.0 40.0 24.0 41.0 50 34.89242566275451 38.0 34.0 40.0 24.0 41.0 51 33.064914319997 36.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 7.0 9 18.0 10 22.0 11 9.0 12 8.0 13 5.0 14 5.0 15 15.0 16 25.0 17 61.0 18 94.0 19 177.0 20 282.0 21 497.0 22 788.0 23 1296.0 24 1910.0 25 2761.0 26 3358.0 27 3783.0 28 4047.0 29 4491.0 30 5544.0 31 6613.0 32 8949.0 33 13188.0 34 17912.0 35 22908.0 36 29877.0 37 50225.0 38 52920.0 39 34887.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.407214368742736 20.398215156173833 24.62934493231842 14.56522554276501 2 32.80587948554501 24.403614683715176 26.018598372642394 16.771907458097417 3 32.03982151561738 23.410326596422813 29.104578349394426 15.445273538565377 4 27.781319134575728 25.826240203982152 28.44613596310323 17.946304698338896 5 22.351419250815553 37.27698826352694 24.243128726236453 16.12846375942105 6 25.640631444748585 34.34249503168473 26.52030447335858 13.496569050208107 7 47.750196857774945 43.39945254790206 6.176084592598148 2.6742660017248494 8 82.9821140650193 5.080805429524917 9.123701676103341 2.8133788293524318 9 76.61704600847426 8.008549251940455 10.506580674191008 4.867824065394278 10 40.99628782481533 28.15816116089842 17.939930256102592 12.905620758183659 11 30.713562563275715 25.982976489557164 25.845363530691063 17.458097416476058 12 30.015748621995574 23.038734110765308 29.005212043946155 17.940305223292963 13 25.30128613746297 24.006524429112453 30.099741272638642 20.59244816078593 14 19.681652855375155 26.269826390190858 30.88079793018111 23.167722824252877 15 19.934380741685104 26.31407251865462 33.886159961003415 19.86538677865687 16 24.225505268289023 25.172297423975404 31.85271288762233 18.74948442011324 17 23.1699726273951 25.871611234017024 29.651280512955115 21.307135625632757 18 23.821290637069257 26.93014361243391 29.420675690877047 19.827890059619783 19 24.817578461884583 27.194120514454983 28.395890359593533 19.592410664066897 20 26.94776707038134 26.215456147587084 28.774607221868088 18.062169560163486 21 26.409314185008814 26.206456935018185 29.129701151149273 18.254527728823728 22 25.02006074468484 23.612433912032696 30.206981889084705 21.160523454197758 23 24.368742735010688 25.204169635156926 30.770182609021713 19.656905020810676 24 23.069856387566087 25.022685515017436 31.461247140875177 20.446210956541304 25 23.343582436536803 26.54955191420751 29.148824477858188 20.958041171397504 26 21.560238479133076 28.307398102666014 28.671116277325737 21.461247140875173 27 21.744347369605162 28.26727661329634 29.601784843826167 20.38659117327234 28 20.59169822640519 28.147662079568036 30.44471108777982 20.815928606246953 29 21.783718924594098 26.69691402002325 30.28085042558776 21.238516629794894 30 22.677265739247815 26.503805916982266 29.993625557763696 20.825302786006226 31 23.976152086692416 26.79628032547152 28.401514867449094 20.82605272038697 32 25.071431249765645 27.33360830927294 27.612583898908845 19.98237654205257 33 24.328246278450635 26.55817615958604 28.347519592035695 20.76605796992763 34 22.505530766057973 26.639544039896506 29.939255315159922 20.9156698788856 35 23.377329483670177 26.739285312535156 28.632869623907908 21.250515579886763 36 23.063106978139412 28.897971427500096 27.21361880835427 20.825302786006226 37 22.90449585661255 28.380516704788334 28.203157223742924 20.5118302148562 38 22.185683752671643 28.395140425212794 28.34077018260902 21.078405639506542 39 23.02711012786381 27.197870186358692 28.645618508380515 21.12940117739698 40 24.037646705913232 26.171584986313697 29.511792718137166 20.278975589635905 41 20.518954591473246 26.777156998762607 30.180734185758745 22.5231542240054 42 20.98728861224643 27.309985376279577 29.158573624807833 22.544152386666166 43 21.93145599760021 27.496344069893887 28.626120214481233 21.946079718024674 44 21.767595335408153 27.24961565862987 28.97071506243204 22.01207394352994 45 21.812966365443025 26.90877048258277 28.249278188158538 23.028984963815667 46 21.48636994263002 28.71723724174135 27.58371142525029 22.212681390378343 47 21.76722036821778 26.837526716412313 29.875510892796882 21.519742022573023 48 21.817465971727472 26.682665266789158 30.099741272638642 21.400127488844724 49 21.418500881172896 27.293861787093633 29.54179009336683 21.745847238366643 50 20.589073456072594 27.390978289399676 29.989875885859984 22.030072368667742 51 20.98841351381754 26.952266676665793 29.221943079980502 22.837376729536167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 152.0 1 424.5 2 697.0 3 2525.0 4 4353.0 5 2955.5 6 1558.0 7 1342.0 8 1126.0 9 1145.0 10 1164.0 11 1093.5 12 1023.0 13 985.0 14 947.0 15 942.0 16 937.0 17 901.5 18 866.0 19 966.0 20 1066.0 21 1213.0 22 1360.0 23 1588.0 24 1816.0 25 2161.5 26 3060.5 27 3614.0 28 4364.0 29 5114.0 30 5791.5 31 6469.0 32 7286.0 33 8103.0 34 8783.0 35 9463.0 36 9921.5 37 10380.0 38 11369.0 39 12358.0 40 13386.5 41 14415.0 42 15058.0 43 15701.0 44 16144.0 45 16587.0 46 17112.0 47 17637.0 48 17125.5 49 16614.0 50 16134.0 51 15654.0 52 15193.5 53 14733.0 54 14320.5 55 13908.0 56 14061.0 57 14214.0 58 14012.5 59 13811.0 60 12849.5 61 11888.0 62 10558.0 63 9228.0 64 7744.5 65 6261.0 66 5192.0 67 4123.0 68 3374.0 69 2625.0 70 2201.0 71 1777.0 72 1453.0 73 1129.0 74 903.5 75 489.5 76 301.0 77 217.0 78 133.0 79 114.0 80 95.0 81 78.5 82 62.0 83 41.0 84 20.0 85 16.0 86 12.0 87 8.5 88 5.0 89 4.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 266690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.827546149085705 #Duplication Level Percentage of deduplicated Percentage of total 1 60.69877823258034 24.174833912512124 2 11.808143888847905 9.405787913362687 3 7.02954290362926 8.399083332038169 4 5.133821266432566 8.178700136400026 5 3.7922046901055326 7.551710365097867 6 2.939966431011905 7.025498922473367 7 2.241543949517159 6.2492636566218955 8 1.7145264409016023 5.462830475906899 9 1.3110491261298296 4.699428261718885 >10 3.298543460427663 16.754705826366706 >50 0.020920994335677966 0.5626298990274126 >100 0.008966140429576271 0.6368272129330023 >500 9.962378255084746E-4 0.3487670530642424 >1k 9.962378255084746E-4 0.5499330324767234 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 0.5197045258539877 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 879 0.3295961603359706 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 317 0.11886459934755708 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 279 0.10461584611346508 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017248490757058758 0.0 2 0.0 0.0 0.0 0.08061794592973115 0.0 3 0.0 0.0 0.0 0.11623982901496119 0.0 4 0.0 0.0 0.0 0.16723536690539578 0.0 5 0.0 0.0 0.0 0.3569687652330421 0.0 6 0.0 0.0 0.0 0.5092054445236042 0.0 7 0.0 0.0 0.0 0.6123214218755859 0.0 8 0.0 0.0 0.0 0.8433012111440249 0.0 9 0.0 0.0 0.0 0.9554164010649068 0.0 10 0.0 0.0 0.0 1.2775132175934605 0.0 11 0.0 0.0 0.0 1.5257414976189583 0.0 12 0.0 0.0 0.0 1.8065919232067194 0.0 13 0.0 0.0 0.0 1.9048333270838802 0.0 14 0.0 0.0 0.0 1.9644531103528442 0.0 15 0.0 0.0 0.0 2.0495706625670254 0.0 16 0.0 0.0 0.0 2.181934080767933 0.0 17 0.0 0.0 0.0 2.3352956616296074 0.0 18 0.0 0.0 0.0 2.5111552739135328 0.0 19 0.0 0.0 0.0 2.628894971689977 0.0 20 0.0 0.0 0.0 2.746259702276051 0.0 21 0.0 0.0 0.0 2.910120364468109 0.0 22 0.0 0.0 0.0 3.076605796992763 0.0 23 0.0 0.0 0.0 3.234466984138888 0.0 24 0.0 0.0 0.0 3.355206419438299 0.0 25 0.0 0.0 0.0 3.4778206906895646 0.0 26 0.0 0.0 0.0 3.596310322846751 0.0 27 0.0 0.0 0.0 3.734673216093592 0.0 28 0.0 0.0 0.0 3.8734110765308034 0.0 29 0.0 0.0 0.0 4.029022460534703 0.0 30 0.0 0.0 0.0 4.195507893059357 0.0 31 0.0 0.0 0.0 4.354868948966965 0.0 32 0.0 0.0 0.0 4.4981064156886275 0.0 33 0.0 0.0 0.0 4.647718324646593 0.0 34 0.0 0.0 0.0 4.81082905245791 0.0 35 0.0 0.0 0.0 5.005062057070006 0.0 36 0.0 0.0 0.0 5.172297423975402 0.0 37 0.0 0.0 0.0 5.342157561213394 0.0 38 0.0 0.0 0.0 5.552514155011436 0.0 39 0.0 0.0 0.0 5.818740860174735 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 115 0.0 45.000004 1 TGACCGA 30 2.1592114E-6 45.000004 16 AGACGCG 20 7.023534E-4 45.0 10 GGGCGAA 20 7.023534E-4 45.0 1 TTGCGAA 25 3.882723E-5 45.0 1 CGGTCTA 25 3.882723E-5 45.0 31 AGCACGG 20 7.023534E-4 45.0 2 CGTTTTA 315 0.0 42.142857 1 TACGAAT 75 0.0 42.000004 12 ATCCAAG 115 0.0 41.08696 44 GCATATC 110 0.0 40.909092 28 TGCGAAG 50 1.0750227E-9 40.5 2 CGAGATA 45 1.918852E-8 40.0 19 ATATCAC 125 0.0 39.600002 30 CGTTTTT 525 0.0 39.428574 1 CATATCA 120 0.0 39.375004 29 TGCATAT 120 0.0 39.375004 27 CTACGAA 80 0.0 39.375 11 CGAATAT 80 0.0 39.375 14 TTACACG 40 3.4449113E-7 39.375 34 >>END_MODULE