##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936787.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 338852 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6587448207477 31.0 31.0 34.0 30.0 34.0 2 31.6963659650821 31.0 31.0 34.0 30.0 34.0 3 31.407248592305784 31.0 31.0 34.0 28.0 34.0 4 35.368532574693376 37.0 35.0 37.0 33.0 37.0 5 30.886702749282872 35.0 35.0 37.0 0.0 37.0 6 33.10307449860116 36.0 35.0 37.0 17.0 37.0 7 34.89030314119439 37.0 35.0 37.0 32.0 37.0 8 35.15693577136921 36.0 35.0 37.0 32.0 37.0 9 37.2189333396291 39.0 37.0 39.0 34.0 39.0 10 37.18345472359614 39.0 37.0 39.0 34.0 39.0 11 37.02436461936185 39.0 37.0 39.0 33.0 39.0 12 36.9674135020599 39.0 37.0 39.0 33.0 39.0 13 36.78691287051574 39.0 35.0 39.0 33.0 39.0 14 38.05358386552241 40.0 37.0 41.0 33.0 41.0 15 37.93575661350678 40.0 37.0 41.0 33.0 41.0 16 37.96798012111482 40.0 37.0 41.0 33.0 41.0 17 37.84101023455668 40.0 36.0 41.0 33.0 41.0 18 37.633308937235135 39.0 36.0 41.0 32.0 41.0 19 37.50024199355471 39.0 36.0 41.0 32.0 41.0 20 37.472728506840745 39.0 35.0 41.0 32.0 41.0 21 37.497665647539336 39.0 35.0 41.0 33.0 41.0 22 37.54053687155454 39.0 35.0 41.0 33.0 41.0 23 37.56923671691476 39.0 35.0 41.0 33.0 41.0 24 37.407000696469254 39.0 35.0 41.0 33.0 41.0 25 37.285357619255606 39.0 35.0 41.0 33.0 41.0 26 37.15867989564766 39.0 35.0 41.0 32.0 41.0 27 37.12189097305018 39.0 35.0 40.0 32.0 41.0 28 37.04605845619917 39.0 35.0 40.0 32.0 41.0 29 36.85280299363734 39.0 35.0 40.0 31.0 41.0 30 36.69778251271942 39.0 35.0 40.0 31.0 41.0 31 36.458748952344976 38.0 35.0 40.0 30.0 41.0 32 36.19415260939879 38.0 35.0 40.0 30.0 41.0 33 36.13022794612397 38.0 35.0 40.0 30.0 41.0 34 35.77083800597311 38.0 35.0 40.0 29.0 41.0 35 35.73109204018274 38.0 35.0 40.0 28.0 41.0 36 35.442184198411105 38.0 35.0 40.0 26.0 41.0 37 35.25982434809297 38.0 34.0 40.0 25.0 41.0 38 35.04929585777862 38.0 34.0 40.0 25.0 41.0 39 34.71805094849669 38.0 33.0 40.0 23.0 41.0 40 34.69845537284714 38.0 33.0 40.0 24.0 41.0 41 34.58990355671503 38.0 33.0 40.0 23.0 41.0 42 34.649956323114516 38.0 33.0 40.0 23.0 41.0 43 34.56779360900924 38.0 33.0 40.0 23.0 41.0 44 34.35091426345425 37.0 33.0 40.0 22.0 41.0 45 34.34846481649806 37.0 33.0 40.0 22.0 41.0 46 33.911391994144935 37.0 33.0 40.0 21.0 41.0 47 33.78195495378513 37.0 33.0 40.0 21.0 41.0 48 33.53798708580737 37.0 32.0 40.0 20.0 41.0 49 33.41840980723148 37.0 32.0 40.0 19.0 41.0 50 33.18903533105899 37.0 32.0 40.0 18.0 41.0 51 30.699541392702418 35.0 27.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 11.0 10 19.0 11 12.0 12 11.0 13 5.0 14 10.0 15 7.0 16 19.0 17 56.0 18 122.0 19 293.0 20 519.0 21 811.0 22 1174.0 23 1755.0 24 2665.0 25 3887.0 26 5290.0 27 6134.0 28 6805.0 29 7717.0 30 9168.0 31 10988.0 32 13886.0 33 17901.0 34 25042.0 35 31659.0 36 31545.0 37 43437.0 38 57849.0 39 60041.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.109204018273466 17.039592506463 17.86384616292659 16.987357312336947 2 31.685219505860967 36.23499344846718 17.836695666544685 14.24309137912717 3 23.641589838631617 34.65967443013469 28.980203746768503 12.718531984465194 4 23.72540224050618 18.01464946348258 43.86074156268813 14.399206733323103 5 25.90865628652037 31.76312962591338 23.079397495071593 19.24881659249466 6 19.772939218301797 36.340939407174815 30.188105721672 13.698015652851392 7 58.94313741692538 6.210971161451017 27.713278953643478 7.13261246798012 8 54.67195117632476 14.984417975989517 21.27713574067735 9.06649510700837 9 50.31577207748516 7.03227367700353 20.552040418825918 22.0999138266854 10 33.52702654846363 18.546740169749626 29.689658021791228 18.23657525999551 11 25.50169395488296 20.438421493749484 31.373579025651317 22.68630552571624 12 23.260597547011674 16.878755326809344 37.32189864601655 22.538748480162432 13 18.892023656345543 20.26017258272048 43.93924191092276 16.908561850011214 14 17.12901207606861 29.314863126084546 31.526448124845064 22.029676673001784 15 13.085949027894184 24.59805460791142 44.85793207654079 17.458064287653606 16 14.496889497479726 27.64245157177765 32.047619609741126 25.8130393210015 17 14.606967053462869 25.423783834830544 34.05410031518185 25.915148796524733 18 14.62408367074711 29.06254057818753 33.08878212316882 23.224593627896546 19 15.659048788261543 29.714447605444267 29.67519743132695 24.951306174967243 20 17.58791448774096 28.064759836152657 34.957444548062284 19.389881128044102 21 17.649593332782455 32.579120087825956 31.926622832387004 17.844663747004592 22 14.80144723950279 23.937884386103665 31.24402393965507 30.01664443473847 23 15.609174506864354 30.833815353015474 32.63165039604311 20.92535974407706 24 22.179594631284456 22.04266169301052 28.913803076269286 26.863940599435743 25 18.183454723596142 33.0415638685916 26.727007661161807 22.047973746650452 26 15.927602611169478 23.384250351185766 31.52231652756956 29.165830510075196 27 21.273594371584053 26.18399773352378 26.65440959474933 25.887998300142833 28 16.34194279508458 21.715380165972164 35.81416075454771 26.12851628439555 29 20.51456092925525 19.80953336559914 34.75647185201799 24.91943385312762 30 17.826661787447026 22.922691912693445 34.16093161616281 25.08971468369672 31 25.921346192437994 20.16071913401721 28.063874493879332 25.85406017966546 32 21.388688867116027 23.593486241781072 34.0251791342533 20.992645756849598 33 17.35477435576594 19.197761854733038 33.35467991925679 30.09278387024424 34 19.35800880620448 17.725437654197112 35.928369907806356 26.98818363179205 35 14.486855618382066 17.58525846092099 36.466658009986666 31.46122791071028 36 20.13504420809085 18.83801777767285 33.340809556974726 27.686128457261578 37 16.423689398321393 19.19038400245535 37.76870137995349 26.61722521926977 38 19.403456376235052 21.5929078181625 32.87570974938912 26.12792605621333 39 20.64854272661811 18.09314981171721 34.546055505058256 26.712251956606426 40 18.35373555416524 17.973333490727516 42.57935617909884 21.093574776008406 41 15.753780411507087 23.491376766257837 29.808589000507595 30.94625382172748 42 17.4229457108118 20.005194008003492 39.88230850046628 22.689551780718425 43 22.630233848405794 18.84273960313057 29.272366696965047 29.254659851498587 44 21.312844545701367 18.65947375255274 32.36073566040631 27.66694604133958 45 19.1148347951318 17.654315158240173 30.6177918383247 32.61305820830333 46 26.51924734102204 21.534770342214298 28.323279779962935 23.622702536800727 47 16.85189994451855 18.365835231900654 41.20471474271953 23.57755008086126 48 19.303707813440678 20.748881517594704 31.341116475629477 28.606294193335142 49 16.795533153116995 16.991193795521347 39.87611110455302 26.337161946808635 50 18.961375467755833 16.14097009904029 37.12535266133887 27.772301771865003 51 17.496724233588708 16.524323303389092 31.383612904748976 34.59533955827323 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 437.0 1 731.5 2 1026.0 3 4575.5 4 8125.0 5 5368.5 6 2612.0 7 2186.5 8 1761.0 9 1685.0 10 1609.0 11 1652.5 12 1696.0 13 1661.5 14 1627.0 15 1600.0 16 1573.0 17 1536.5 18 1500.0 19 1408.5 20 1317.0 21 1415.0 22 1513.0 23 1491.5 24 1470.0 25 1625.0 26 2081.5 27 2383.0 28 2690.5 29 2998.0 30 3412.5 31 3827.0 32 4233.0 33 4639.0 34 5330.0 35 6021.0 36 6410.0 37 6799.0 38 7468.5 39 8138.0 40 9643.5 41 11149.0 42 12735.0 43 14321.0 44 21746.0 45 29171.0 46 51887.5 47 74604.0 48 56469.5 49 38335.0 50 36110.0 51 33885.0 52 25886.0 53 17887.0 54 14985.5 55 12084.0 56 10623.0 57 9162.0 58 8688.0 59 8214.0 60 7762.0 61 7310.0 62 6728.0 63 6146.0 64 5477.0 65 4808.0 66 3981.5 67 3155.0 68 2502.5 69 1850.0 70 1552.5 71 1255.0 72 1167.5 73 1080.0 74 933.5 75 622.0 76 457.0 77 307.0 78 157.0 79 115.5 80 74.0 81 63.0 82 52.0 83 44.0 84 36.0 85 24.0 86 12.0 87 9.0 88 6.0 89 4.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 338852.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.450108557895945 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44753785731005 29.753189174138093 2 8.82961433448551 6.6134003070167315 3 3.2352689238653443 3.63483517238233 4 1.7156761539788088 2.5700903286679915 5 1.0850195612964 2.031705017899541 6 0.7524854048566891 1.690839606006917 7 0.5525992427697994 1.4486431141518061 8 0.4436338573670663 1.3291308894683806 9 0.3615328046860155 1.2185498504458687 >10 3.4100749836034563 23.633604873593622 >50 0.08840933690736767 2.2511430804273043 >100 0.05841331188522507 4.567913706994446 >500 0.003946845397650342 1.0024459863071555 >1k 0.013419274352011165 9.245797896709702 >5k 0.0015787381590601371 5.795030571978523 >10k+ 7.893690795300686E-4 3.213680423811586 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTC 10871 3.208185284430961 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGC 9918 2.926941555605397 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCG 9685 2.858179972377321 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4639 1.3690342686482595 No Hit GCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTGC 2747 0.8106784082726382 Illumina PCR Primer Index 10 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCT 2386 0.7041422213827866 No Hit GAACTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCT 2130 0.6285930140592353 Illumina PCR Primer Index 10 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTC 1922 0.5672092831088499 No Hit CGCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTG 1835 0.5415343571824868 Illumina PCR Primer Index 10 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTGC 1765 0.5208763708049532 Illumina PCR Primer Index 10 (95% over 23bp) GAATATGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTC 1601 0.4724776598633031 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCG 1557 0.45949263985456773 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTT 1532 0.45211478757687723 No Hit CTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTGCT 1526 0.4503441030302315 Illumina PCR Primer Index 10 (95% over 24bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGC 1472 0.4344079421104199 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCT 1380 0.40725744572851863 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTT 1310 0.3865994593509851 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTC 1208 0.3564978220580076 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTA 1174 0.34646394296034844 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTT 1092 0.32226458748952347 No Hit CGTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCT 784 0.23136944742837579 Illumina PCR Primer Index 10 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 776 0.22900853469951482 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTC 706 0.2083505483219813 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCC 575 0.16969060238688277 No Hit GATTCCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTT 550 0.16231275010919222 No Hit TATTCCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTT 491 0.1449010187338425 No Hit GCTGACTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTGC 491 0.1449010187338425 Illumina PCR Primer Index 10 (95% over 23bp) CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 441 0.1301453141784614 No Hit AATGCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTC 424 0.1251283746296318 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 415 0.12247234780966322 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATG 407 0.12011143508080224 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCG 401 0.1183407505341565 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGT 392 0.11568472371418789 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 373 0.11007755598314307 No Hit TCTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCTTCTGC 355 0.10476550234320588 Illumina PCR Primer Index 10 (95% over 23bp) GAATAACTGTCTCTTATACACATCTGACGCTCGTTCTCTCGTATGCCGTCT 343 0.10122413324991442 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5863916990308453 0.0 2 0.0 0.0 0.0 2.6554365917863847 0.0 3 0.0 0.0 0.0 3.8353027280346583 0.0 4 0.0 0.0 0.0 5.5085996246148765 0.0 5 0.0 0.0 0.0 11.740228772443427 0.0 6 0.0 0.0 0.0 14.761016609021048 0.0 7 0.0 0.0 0.0 17.50233140131975 0.0 8 0.0 0.0 0.0 19.992799216176973 0.0 9 0.0 0.0 0.0 20.914440522706077 0.0 10 0.0 0.0 0.0 25.894195696056094 0.0 11 0.0 0.0 0.0 28.065350064334872 0.0 12 0.0 0.0 0.0 33.17672612231889 0.0 13 0.0 0.0 0.0 34.041705523355326 0.0 14 0.0 0.0 0.0 34.47375255273689 0.0 15 0.0 0.0 0.0 35.38595020835055 0.0 16 0.0 0.0 0.0 36.37841889674548 0.0 17 0.0 0.0 0.0 37.32514490101873 0.0 18 2.951140911076222E-4 0.0 0.0 38.40880384356592 0.0 19 2.951140911076222E-4 0.0 0.0 39.10940469585542 0.0 20 2.951140911076222E-4 0.0 0.0 39.750392501741175 0.0 21 2.951140911076222E-4 0.0 0.0 40.43446696492864 0.0 22 2.951140911076222E-4 0.0 0.0 41.20796099772172 0.0 23 2.951140911076222E-4 0.0 0.0 41.91889084319998 0.0 24 2.951140911076222E-4 0.0 0.0 42.509119025415224 0.0 25 2.951140911076222E-4 0.0 0.0 42.99045010801176 0.0 26 2.951140911076222E-4 0.0 0.0 43.449057405593 0.0 27 2.951140911076222E-4 0.0 0.0 43.94514419274491 0.0 28 2.951140911076222E-4 0.0 0.0 44.429131302161416 0.0 29 2.951140911076222E-4 0.0 0.0 44.87209755291396 0.0 30 2.951140911076222E-4 0.0 0.0 45.362577172334824 0.0 31 2.951140911076222E-4 0.0 0.0 45.81351150354727 0.0 32 2.951140911076222E-4 0.0 0.0 46.26149469384864 0.0 33 2.951140911076222E-4 0.0 0.0 46.696787978232386 0.0 34 2.951140911076222E-4 0.0 0.0 47.10729167896309 0.0 35 2.951140911076222E-4 0.0 0.0 47.59068856019737 0.0 36 2.951140911076222E-4 0.0 0.0 47.99617532137925 0.0 37 2.951140911076222E-4 0.0 0.0 48.398415827558935 0.0 38 2.951140911076222E-4 0.0 0.0 48.79947587737419 0.0 39 2.951140911076222E-4 0.0 0.0 49.1984701285517 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGGA 65 0.0 45.000004 4 AATACGG 205 0.0 45.000004 5 TCACGCA 20 7.026239E-4 45.0 27 GTTGAGC 20 7.026239E-4 45.0 25 TGTCACG 20 7.026239E-4 45.0 25 ATGGGCG 35 1.2085366E-7 45.0 5 CGGGTCA 25 3.884965E-5 45.0 6 TAATACG 210 0.0 45.0 4 TACCCTA 20 7.026239E-4 45.0 31 GCCTTAT 25 3.884965E-5 45.0 25 TCGCAAG 20 7.026239E-4 45.0 1 CGCGGTA 20 7.026239E-4 45.0 31 ACTGAAC 20 7.026239E-4 45.0 42 GGCACAA 20 7.026239E-4 45.0 8 TTATGTC 35 1.2085366E-7 45.0 3 GGGTACG 20 7.026239E-4 45.0 7 GGCCGAT 35 1.2085366E-7 45.0 8 TCTTACA 20 7.026239E-4 45.0 32 TTCAACG 35 1.2085366E-7 45.0 18 TACGGGA 20 7.026239E-4 45.0 4 >>END_MODULE