SRR2936778.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936778.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	536941
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGC	8063	1.5016547441897712	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTC	7600	1.4154255309242543	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCG	7284	1.3565736272700353	No Hit
GCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC	2564	0.47751987648549843	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1863	0.3469654952778797	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCT	1639	0.3052476901559017	No Hit
GAACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCT	1231	0.2292616879694417	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTC	1219	0.22702680555219287	No Hit
CTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGCT	1148	0.21380375125013734	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGC	1135	0.21138262863145113	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCG	1100	0.20486422158114206	No Hit
GAATATGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTC	1070	0.19927701553802002	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCATTCGTCGTA	849	0.1581179310203542	No Hit
CCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC	791	0.1473159993369849	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTT	739	0.13763150886224	No Hit
TGAATGATACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCC	562	0.10466699320781986	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTGCG	50	2.1827873E-11	45.000004	1
GATCACG	25	3.8880185E-5	45.000004	1
AGCGATT	50	2.1827873E-11	45.000004	22
ACCGCGC	20	7.0299243E-4	45.0	12
GGCGTAC	20	7.0299243E-4	45.0	9
ATTAACG	20	7.0299243E-4	45.0	1
TAGTTCG	20	7.0299243E-4	45.0	29
CGCCTAT	20	7.0299243E-4	45.0	40
AGTGCGT	20	7.0299243E-4	45.0	1
ACGATAG	20	7.0299243E-4	45.0	1
TACGCGG	70	0.0	45.0	2
GTTAACG	20	7.0299243E-4	45.0	1
CGTACTA	20	7.0299243E-4	45.0	44
CCGACGG	20	7.0299243E-4	45.0	2
TTACGCG	20	7.0299243E-4	45.0	1
AACTCGT	20	7.0299243E-4	45.0	29
GCGAGCC	20	7.0299243E-4	45.0	22
GCGATTC	30	2.1633332E-6	44.999996	9
GCGATAC	30	2.1633332E-6	44.999996	9
GCCTACG	30	2.1633332E-6	44.999996	1