SRR2936774.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936774.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	458719
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC	4030	0.8785334812815688	No Hit
GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC	3751	0.8177119325774603	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG	3531	0.7697522884380198	No Hit
GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	2202	0.48003243815930885	No Hit
CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	1261	0.27489596027197477	No Hit
CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT	1254	0.27336997159481075	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCT	824	0.1796306671404498	No Hit
TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	798	0.17396270919669776	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTC	646	0.14082695506399343	No Hit
GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT	614	0.13385100682552936	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG	600	0.1307990294712013	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC	593	0.1292730407940373	No Hit
GAATATGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC	571	0.12447707638009325	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	80	0.0	45.000004	25
TATCACG	20	7.0288486E-4	45.000004	1
AATCCGT	20	7.0288486E-4	45.000004	16
ATCTCGG	20	7.0288486E-4	45.000004	2
GTACCGA	20	7.0288486E-4	45.000004	9
GAAGCGT	20	7.0288486E-4	45.000004	29
ACGCCGA	35	1.2097917E-7	45.000004	12
GATCGGC	20	7.0288486E-4	45.000004	35
CTATCTC	70	0.0	45.000004	3
CGACGGT	80	0.0	45.000004	28
GGCACGT	20	7.0288486E-4	45.000004	8
CGCATCG	20	7.0288486E-4	45.000004	21
GTCTACG	20	7.0288486E-4	45.000004	1
TCGATTA	20	7.0288486E-4	45.000004	41
CCGCTCG	35	1.2097917E-7	45.000004	19
AGACGAC	20	7.0288486E-4	45.000004	16
CCGTAGA	20	7.0288486E-4	45.000004	17
GTTCGCG	20	7.0288486E-4	45.000004	1
ACGTGAC	35	1.2097917E-7	45.000004	15
CGAATTC	20	7.0288486E-4	45.000004	45