##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936772.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 277685 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.739888722833427 31.0 31.0 34.0 30.0 34.0 2 31.804328645767686 31.0 31.0 34.0 30.0 34.0 3 31.78342726470641 31.0 31.0 34.0 30.0 34.0 4 35.523791346309665 37.0 35.0 37.0 33.0 37.0 5 30.63519095377856 35.0 35.0 37.0 0.0 37.0 6 33.00633091452545 36.0 35.0 37.0 17.0 37.0 7 34.96076849667789 37.0 35.0 37.0 32.0 37.0 8 35.33078848335344 37.0 35.0 37.0 33.0 37.0 9 37.36201091164449 39.0 37.0 39.0 34.0 39.0 10 37.180402254352956 39.0 37.0 39.0 34.0 39.0 11 36.99689936438771 39.0 37.0 39.0 33.0 39.0 12 36.8537227433963 39.0 35.0 39.0 33.0 39.0 13 36.618909915911914 39.0 35.0 39.0 33.0 39.0 14 37.75686839404361 39.0 36.0 41.0 33.0 41.0 15 37.756843185624 39.0 36.0 41.0 33.0 41.0 16 37.798750382627794 39.0 36.0 41.0 33.0 41.0 17 37.743515134054775 39.0 36.0 41.0 33.0 41.0 18 37.65031960674865 39.0 36.0 41.0 33.0 41.0 19 37.626955002970995 39.0 36.0 41.0 33.0 41.0 20 37.65769126888381 39.0 36.0 41.0 33.0 41.0 21 37.639883321029224 39.0 36.0 41.0 33.0 41.0 22 37.64650233177881 39.0 36.0 41.0 33.0 41.0 23 37.69693357581432 39.0 36.0 41.0 33.0 41.0 24 37.56667807047554 39.0 36.0 41.0 33.0 41.0 25 37.42443416100978 39.0 35.0 41.0 32.0 41.0 26 37.34271566703279 39.0 35.0 41.0 32.0 41.0 27 37.22293606064426 39.0 35.0 41.0 32.0 41.0 28 37.20549183427265 39.0 35.0 41.0 32.0 41.0 29 37.19721987143706 39.0 35.0 41.0 32.0 41.0 30 37.0763527018024 39.0 35.0 41.0 32.0 41.0 31 37.04464411113312 39.0 35.0 40.0 31.0 41.0 32 36.89584241136539 39.0 35.0 40.0 31.0 41.0 33 36.8124529592884 39.0 35.0 40.0 31.0 41.0 34 36.7085078416191 39.0 35.0 40.0 31.0 41.0 35 36.69863694473954 39.0 35.0 40.0 31.0 41.0 36 36.64000216072168 39.0 35.0 40.0 31.0 41.0 37 36.52205196535643 39.0 35.0 40.0 30.0 41.0 38 36.49934278048868 39.0 35.0 40.0 30.0 41.0 39 36.357894736842105 38.0 35.0 40.0 30.0 41.0 40 36.19702900768857 38.0 35.0 40.0 30.0 41.0 41 36.21355852854853 38.0 35.0 40.0 30.0 41.0 42 36.14993607865027 38.0 35.0 40.0 30.0 41.0 43 36.09707042152079 38.0 35.0 40.0 30.0 41.0 44 35.89759619712984 38.0 35.0 40.0 30.0 41.0 45 35.887484019662566 38.0 35.0 40.0 30.0 41.0 46 35.61181554639249 38.0 35.0 40.0 28.0 41.0 47 35.42804616741992 38.0 34.0 40.0 27.0 41.0 48 35.38131695986459 38.0 34.0 40.0 27.0 41.0 49 35.28413490105695 38.0 34.0 40.0 27.0 41.0 50 35.06940958280065 38.0 34.0 40.0 26.0 41.0 51 33.104197201865425 36.0 31.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 9.0 10 10.0 11 10.0 12 10.0 13 5.0 14 6.0 15 14.0 16 16.0 17 32.0 18 66.0 19 136.0 20 225.0 21 387.0 22 616.0 23 930.0 24 1289.0 25 1700.0 26 2211.0 27 2769.0 28 3731.0 29 4439.0 30 5858.0 31 7778.0 32 10265.0 33 14280.0 34 21154.0 35 26241.0 36 25873.0 37 37529.0 38 52871.0 39 57207.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.419864234654376 20.39649242847111 23.277814790139907 9.90582854673461 2 29.760339953544484 30.359940220033494 23.166177503286097 16.713542323135925 3 30.234258242252913 30.309163260529015 23.810072564236457 15.646505932981617 4 27.430361740821436 22.608711309577398 31.121594612600607 18.83933233700056 5 23.9184687685687 37.07402272358968 20.425302050884998 18.582206456956623 6 24.323964204044152 35.48013036354142 26.56031114392207 13.635594288492356 7 71.69346561751625 6.557070061400508 16.092334839836507 5.657129481246736 8 67.34645371554099 10.850784161910077 13.48902533446171 8.31373678808722 9 61.17003079028396 8.157084466211714 15.054468192376252 15.618416551128078 10 39.49367088607595 21.225489313430685 23.242162882402724 16.03867691809064 11 29.91807263626051 22.823703116841024 25.68737958478132 21.570844662117146 12 26.09431550137746 20.12892306030214 32.82928498118372 20.94747645713668 13 21.56616309847489 24.576408520445828 36.39051443182023 17.46691394925905 14 18.874984244737743 29.40454111673299 29.302266957163692 22.418207681365576 15 15.934962277400652 23.81151304535715 42.66561031384482 17.587914363397374 16 17.29333597421539 26.738570682607993 31.82310891837874 24.144984424797883 17 18.005293768118552 24.6095395862218 31.04704971460468 26.338116931054973 18 19.17280371644129 26.159137151808704 32.82244269586042 21.845616435889585 19 18.95529106721645 27.948574823991212 28.33102256153555 24.765111547256787 20 20.59599906368727 28.87732502655887 31.186056142751678 19.340619767002178 21 19.458379098618938 30.770477339431366 31.203702036480184 18.56744152546951 22 17.051695266218918 24.528512523182744 29.96236743072186 28.45742477987648 23 17.447827574409853 28.72787511028684 31.17021085042404 22.65408646487927 24 22.999801933845905 22.33934134000756 28.5143237841439 26.146532942002633 25 16.109620613284836 31.528890649476928 26.640617966400775 25.72087077083746 26 16.490627869708483 25.890487422799215 29.721086843005562 27.89779786448674 27 20.711957793903164 29.286421664836055 26.628733997155052 23.372886544105732 28 13.306084232133534 26.371608117111116 33.49514737922466 26.827160271530694 29 18.12989538505861 26.464519149395898 26.799791130237498 28.605794335307994 30 18.396024272106885 31.228910456092336 28.162126150134142 22.212939121666636 31 20.214271566703278 27.064839656445255 26.301024542197094 26.419864234654373 32 19.699659686335234 32.69892143976088 22.493472819921852 25.107946053982026 33 16.866953562489872 30.54684264544358 23.437348074256803 29.148855717809745 34 17.393449412103642 24.595134775014856 27.729981813925853 30.281433998955652 35 14.64249059185768 28.623080108756326 23.37252642382556 33.36190287556044 36 17.33186884419396 27.194122837027567 25.84367178637665 29.630336532401824 37 16.01022741595693 29.87809928516124 29.382573779642403 24.729099519239426 38 15.45672254533014 30.43952680195185 25.452221041827972 28.651529610890037 39 19.309649422907253 27.468534490519836 25.909213677368243 27.312602409204672 40 18.806921511784935 24.77591515566199 28.556817977204386 27.860345355348688 41 15.714208545654248 25.337702792732774 23.398455083998055 35.54963357761493 42 17.970722221221887 21.894952914273365 29.474764571366833 30.65956029313791 43 21.33100455552154 23.579595584925364 25.564218448961952 29.525181410591138 44 18.379458739218897 24.329366008246755 28.8006194068819 28.490555845652448 45 18.537911662495272 23.06138250175559 26.404739182887084 31.995966652862055 46 23.986891621801682 25.14215748059852 25.4122476907287 25.458703206871096 47 14.872247330608424 22.507517510848622 35.06491168050129 27.555323478041664 48 18.3535300790464 22.91193258548355 28.598952049984693 30.13558528548535 49 18.73489745575022 19.71730558006374 34.5999963987972 26.947800565388842 50 19.08709508975998 19.609989736572015 31.74604317842159 29.556871995246414 51 17.029367808848157 19.640960080666943 26.37232835767146 36.957343752813436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 143.0 1 194.5 2 246.0 3 436.5 4 627.0 5 428.5 6 230.0 7 250.0 8 270.0 9 278.5 10 287.0 11 304.0 12 321.0 13 333.0 14 345.0 15 359.0 16 373.0 17 359.5 18 346.0 19 472.0 20 598.0 21 634.5 22 671.0 23 880.5 24 1090.0 25 1327.5 26 1840.0 27 2115.0 28 2497.0 29 2879.0 30 3336.0 31 3793.0 32 4743.5 33 5694.0 34 5835.5 35 5977.0 36 7021.0 37 8065.0 38 8755.5 39 9446.0 40 10715.5 41 11985.0 42 14235.5 43 16486.0 44 20521.0 45 24556.0 46 35175.0 47 45794.0 48 40831.5 49 35869.0 50 34363.0 51 32857.0 52 26002.5 53 19148.0 54 15315.5 55 11483.0 56 9754.5 57 8026.0 58 7439.5 59 6853.0 60 6563.0 61 6273.0 62 5351.5 63 4430.0 64 3869.5 65 3309.0 66 2679.5 67 2050.0 68 1678.5 69 1307.0 70 1128.0 71 949.0 72 744.5 73 540.0 74 434.0 75 244.5 76 161.0 77 131.5 78 102.0 79 69.0 80 36.0 81 35.0 82 34.0 83 26.0 84 18.0 85 10.5 86 3.0 87 2.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 277685.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.17474836595423 #Duplication Level Percentage of deduplicated Percentage of total 1 71.69388277450729 25.218142859715144 2 11.578192986946506 8.145200496965986 3 4.937803941643205 5.2105803338315 4 2.676222165344254 3.7654176494949314 5 1.651394932173023 2.9043700595999065 6 1.1179933452777067 2.359508075697283 7 0.79037624776043 1.9460899940580152 8 0.6398771435884311 1.80060140086789 9 0.4648067571026363 1.4714514647892396 >10 4.179165600204761 31.296252948484792 >50 0.2057844893780394 4.567765633721663 >100 0.05119017148707448 3.133046437510129 >500 0.008190427437931917 2.1722455300070225 >1k 0.005119017148707448 6.009327115256496 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGC 4818 1.7350595098762986 No Hit GAATCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTC 4588 1.6522318454363756 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCG 4144 1.4923384410393072 No Hit GCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 2069 0.7450888596791329 TruSeq Adapter, Index 13 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCT 1068 0.3846084592253813 No Hit CCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 940 0.3385130633631633 TruSeq Adapter, Index 13 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGCT 881 0.3172659668329222 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTC 801 0.28845634441903595 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGC 761 0.2740515332120928 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCG 727 0.2618074436861912 No Hit GAATATGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTC 691 0.24884311359994238 No Hit GAACTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCT 669 0.2409204674361237 No Hit TCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 562 0.2023875974575508 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATAACCCTCGTA 466 0.16781605056088733 No Hit AGACAGGAAAAGCCGTGTGTATTTTTATAGCAAAGAACAGATGAAGATATT 443 0.15953328411689505 No Hit GCTGACTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 402 0.14476835262977836 TruSeq Adapter, Index 13 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCCGTCTTCTGC 324 0.11667897077623926 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 302 0.10875632461242056 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.60120280173578E-4 0.0 0.0 0.41918000612204476 0.0 2 3.60120280173578E-4 0.0 0.0 2.2446297063219114 0.0 3 3.60120280173578E-4 0.0 0.0 2.875920557466194 0.0 4 3.60120280173578E-4 0.0 0.0 3.9948142679655003 0.0 5 3.60120280173578E-4 0.0 0.0 8.260078866341358 0.0 6 3.60120280173578E-4 0.0 0.0 9.834884851540414 0.0 7 3.60120280173578E-4 0.0 0.0 11.959594504564524 0.0 8 3.60120280173578E-4 0.0 0.0 14.733240902461421 0.0 9 3.60120280173578E-4 0.0 0.0 15.64794641410231 0.0 10 3.60120280173578E-4 0.0 0.0 19.356104939049644 0.0 11 3.60120280173578E-4 0.0 0.0 21.978500819273638 0.0 12 3.60120280173578E-4 0.0 0.0 26.200550984028666 0.0 13 3.60120280173578E-4 0.0 0.0 27.225093181122496 0.0 14 3.60120280173578E-4 0.0 0.0 27.693249545348145 0.0 15 3.60120280173578E-4 0.0 0.0 28.60147289194591 0.0 16 3.60120280173578E-4 0.0 0.0 30.099573257467995 0.0 17 3.60120280173578E-4 0.0 0.0 31.592631939067648 0.0 18 3.60120280173578E-4 0.0 0.0 33.323009885301694 0.0 19 3.60120280173578E-4 0.0 0.0 34.351153285197256 0.0 20 3.60120280173578E-4 0.0 0.0 35.36093055080397 0.0 21 3.60120280173578E-4 0.0 0.0 36.624952734213224 0.0 22 3.60120280173578E-4 0.0 0.0 37.79390316365666 0.0 23 3.60120280173578E-4 0.0 0.0 38.7529034697589 0.0 24 3.60120280173578E-4 0.0 0.0 39.57325746799431 0.0 25 3.60120280173578E-4 0.0 0.0 40.27369141293192 0.0 26 3.60120280173578E-4 0.0 0.0 40.981687883753175 0.0 27 3.60120280173578E-4 0.0 0.0 41.6342258314277 0.0 28 3.60120280173578E-4 0.0 0.0 42.3415020616886 0.0 29 3.60120280173578E-4 0.0 0.0 42.99223940796226 0.0 30 3.60120280173578E-4 0.0 0.0 43.76397716837424 0.0 31 3.60120280173578E-4 0.0 0.0 44.43848245313935 0.0 32 3.60120280173578E-4 0.0 0.0 45.079136431568145 0.0 33 3.60120280173578E-4 0.0 0.0 45.742477987647874 0.0 34 3.60120280173578E-4 0.0 0.0 46.311107910041954 0.0 35 3.60120280173578E-4 0.0 0.0 46.96004465491474 0.0 36 3.60120280173578E-4 0.0 0.0 47.54812107243819 0.0 37 3.60120280173578E-4 0.0 0.0 48.10666762698742 0.0 38 3.60120280173578E-4 0.0 0.0 48.74011919981274 0.0 39 3.60120280173578E-4 0.0 0.0 49.35340403694834 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTCA 25 3.8831386E-5 45.000004 16 CTCGTTC 25 3.8831386E-5 45.000004 15 ATTAGCC 25 3.8831386E-5 45.000004 25 ATCTAGT 25 3.8831386E-5 45.000004 12 GCGAAAG 25 3.8831386E-5 45.000004 1 GCGCGAC 25 3.8831386E-5 45.000004 9 CGATTGG 50 2.1827873E-11 45.000004 2 CGCGACC 25 3.8831386E-5 45.000004 10 CCTAACA 25 3.8831386E-5 45.000004 27 AAACACG 25 3.8831386E-5 45.000004 40 GCGATGC 25 3.8831386E-5 45.000004 9 GGGTTAC 25 3.8831386E-5 45.000004 7 AGCCTAA 25 3.8831386E-5 45.000004 26 TCTTTAC 25 3.8831386E-5 45.000004 21 CGCACGG 25 3.8831386E-5 45.000004 2 TCACGGG 45 3.8198777E-10 45.0 3 AGCACAT 20 7.0240354E-4 45.0 41 TCACGAC 20 7.0240354E-4 45.0 25 AACGTTA 20 7.0240354E-4 45.0 40 GTCATAC 20 7.0240354E-4 45.0 39 >>END_MODULE