SRR2936771.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936771.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	610005
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC	4370	0.7163875705936837	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGC	4319	0.7080269833853822	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCG	3839	0.6293391037778379	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	2473	0.4054065130613684	No Hit
CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT	1086	0.17803132761206875	No Hit
CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	1027	0.16835927574364143	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTT	960	0.1573757592150884	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCT	954	0.1563921607199941	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTC	712	0.11672035475119057	No Hit
TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	674	0.11049089761559332	No Hit
GAATATGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC	620	0.1016385111597446	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCCGC	45	3.8380676E-10	45.000004	28
TCCGCGG	20	7.03068E-4	45.000004	2
CTATCGT	20	7.03068E-4	45.000004	15
TTCGTAG	20	7.03068E-4	45.000004	1
CGACAGA	20	7.03068E-4	45.000004	37
ATACTCG	20	7.03068E-4	45.000004	14
TCTACCG	20	7.03068E-4	45.000004	3
TGCGAAG	40	6.8066583E-9	45.000004	1
GTCCGCG	20	7.03068E-4	45.000004	1
TACTCGA	20	7.03068E-4	45.000004	15
ACCGTCA	20	7.03068E-4	45.000004	41
ACGTACG	20	7.03068E-4	45.000004	1
CGGTCAA	20	7.03068E-4	45.000004	33
TAGTGCG	20	7.03068E-4	45.000004	1
TTACCCG	40	6.8066583E-9	45.000004	27
AGTACGA	20	7.03068E-4	45.000004	22
GTACGAA	20	7.03068E-4	45.000004	23
CTTACGG	40	6.8066583E-9	45.000004	2
AACACGT	45	3.8380676E-10	45.000004	41
GTCGATG	25	3.8886454E-5	45.0	1