##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936771.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 610005 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.9491463184728 33.0 31.0 34.0 30.0 34.0 2 32.03218006409784 33.0 31.0 34.0 30.0 34.0 3 31.97848706158146 33.0 31.0 34.0 30.0 34.0 4 35.68036163638003 37.0 35.0 37.0 33.0 37.0 5 30.820688355013484 37.0 35.0 37.0 0.0 37.0 6 33.19168203539315 37.0 35.0 37.0 17.0 37.0 7 35.167587150924994 37.0 35.0 37.0 32.0 37.0 8 35.59880164916681 37.0 35.0 37.0 33.0 37.0 9 37.62052770059262 39.0 37.0 39.0 35.0 39.0 10 37.239491479578035 39.0 37.0 39.0 34.0 39.0 11 37.11187121417038 39.0 37.0 39.0 34.0 39.0 12 37.10857779854263 39.0 37.0 39.0 34.0 39.0 13 37.00748518454767 39.0 37.0 39.0 33.0 39.0 14 38.258989680412455 40.0 37.0 41.0 33.0 41.0 15 38.29136974287096 40.0 37.0 41.0 34.0 41.0 16 38.26801583593577 40.0 37.0 41.0 34.0 41.0 17 38.24076196096753 40.0 37.0 41.0 34.0 41.0 18 38.17397726248146 40.0 37.0 41.0 34.0 41.0 19 38.13246940598847 40.0 37.0 41.0 34.0 41.0 20 38.12505143400464 40.0 37.0 41.0 34.0 41.0 21 38.09381070646962 40.0 37.0 41.0 34.0 41.0 22 38.114710535159546 40.0 37.0 41.0 34.0 41.0 23 38.104133572675636 40.0 37.0 41.0 34.0 41.0 24 38.0716469537135 40.0 37.0 41.0 34.0 41.0 25 37.93302186047655 40.0 37.0 41.0 33.0 41.0 26 37.88222391619741 40.0 37.0 41.0 33.0 41.0 27 37.82862271620724 40.0 37.0 41.0 33.0 41.0 28 37.768201899984426 40.0 37.0 41.0 33.0 41.0 29 37.75318399029516 40.0 37.0 41.0 33.0 41.0 30 37.711161383923084 40.0 36.0 41.0 33.0 41.0 31 37.61989983688658 40.0 36.0 41.0 33.0 41.0 32 37.57175596921337 40.0 36.0 41.0 33.0 41.0 33 37.50278440340653 40.0 36.0 41.0 33.0 41.0 34 37.4128179277219 40.0 36.0 41.0 32.0 41.0 35 37.409795001680315 40.0 36.0 41.0 32.0 41.0 36 37.263337185760776 40.0 36.0 41.0 32.0 41.0 37 37.19065745362743 39.0 36.0 41.0 31.0 41.0 38 37.155365939623444 39.0 36.0 41.0 31.0 41.0 39 37.11082204244227 39.0 36.0 41.0 31.0 41.0 40 37.069633855460204 39.0 35.0 41.0 31.0 41.0 41 37.01784083737019 39.0 35.0 41.0 31.0 41.0 42 36.94726600601634 39.0 35.0 41.0 31.0 41.0 43 36.87803214727748 39.0 35.0 41.0 31.0 41.0 44 36.74160211801543 39.0 35.0 41.0 31.0 41.0 45 36.72476127244859 39.0 35.0 41.0 31.0 41.0 46 36.603434398078704 39.0 35.0 40.0 31.0 41.0 47 36.49820083441939 39.0 35.0 40.0 30.0 41.0 48 36.396439373447755 39.0 35.0 40.0 30.0 41.0 49 36.28049934016934 39.0 35.0 40.0 30.0 41.0 50 36.090659912623664 39.0 35.0 40.0 29.0 41.0 51 34.31113843329153 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 19.0 9 37.0 10 35.0 11 23.0 12 13.0 13 17.0 14 10.0 15 19.0 16 39.0 17 67.0 18 127.0 19 269.0 20 481.0 21 708.0 22 1118.0 23 1623.0 24 2258.0 25 3073.0 26 4061.0 27 4857.0 28 6003.0 29 7765.0 30 9780.0 31 12992.0 32 17242.0 33 24427.0 34 36562.0 35 48050.0 36 51661.0 37 79687.0 38 125402.0 39 171528.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.21816214621192 21.83490299259842 24.83078007557315 9.11615478561651 2 30.551061056876584 26.888795993475462 25.949459430660404 16.61068351898755 3 31.57810181883755 26.917812149080746 25.751592200063932 15.75249383201777 4 28.448127474364966 25.02028671896132 28.655502823747348 17.87608298292637 5 23.01817198219687 39.53606937648052 21.02540143113581 16.4203572101868 6 25.78650994663978 36.520520323603904 24.298653289727135 13.394316440029181 7 78.79787870591225 6.517159695412332 10.085163236366915 4.599798362308506 8 79.53393824640781 7.186170605158974 8.058130671060074 5.221760477373136 9 73.18366242899648 8.13058909353202 9.98352472520717 8.702223752264326 10 36.834452176621504 28.17878541979164 19.849017631003026 15.137744772583831 11 27.47370923189154 27.159777378873944 24.89094351685642 20.475569872378095 12 24.677994442668503 23.431119417053957 31.713838411160566 20.177047729116975 13 22.898172965795364 25.349464348652877 33.72005147498791 18.032311210563847 14 20.633437430840733 30.198113130220243 28.755829870246963 20.412619568692058 15 19.136072655142172 28.461078187883704 34.62758501979492 17.775264137179203 16 20.998516405603233 27.25239957049532 30.445816017901496 21.30326800599995 17 21.625724379308366 26.848960254424142 28.115835116105604 23.409480250161884 18 21.604413078581324 27.946328308784352 30.11286792731207 20.33639068532225 19 22.13309726969451 30.430078441979987 26.399619675248566 21.037204613076945 20 22.94800862288014 28.344357833132516 29.302054901189333 19.40557864279801 21 22.700305735198892 29.539266071589577 28.385341103761448 19.375087089450087 22 20.464586355849544 25.820444094720536 27.77419857214285 25.94077097728707 23 19.734592339407055 28.862550306964696 28.505831919410497 22.897025434217753 24 21.388513208908126 26.477323956361015 29.087466496176262 23.0466963385546 25 19.907541741461134 30.08155670855157 27.00682781288678 23.004073737100516 26 20.14622830960402 28.37976737895591 27.953541364415045 23.520462947025024 27 22.13686773059237 29.112220391636136 27.2364980614913 21.514413816280197 28 18.348538126736667 28.197473791198433 30.83712428586651 22.61686379619839 29 20.031311218760504 26.86781255891345 28.417144121769493 24.68373210055655 30 22.36850517618708 27.00109015499873 29.236153802018016 21.394250866796174 31 21.50884009147466 30.144998811485152 25.404873730543194 22.941287366496997 32 21.17458053622511 29.383857509364674 27.284530454668403 22.157031499741805 33 21.52949565987164 26.990926303882755 28.077966574044478 23.40161146220113 34 19.19017057237236 28.94976270686306 27.66157654445455 24.19849017631003 35 20.72196129539922 25.081925557987226 27.733707100761468 26.462406045852084 36 23.27685838640667 27.801739330005493 26.46027491577938 22.461127367808462 37 20.85441922607192 28.547962721617036 29.37844771764166 21.21917033466939 38 19.67737969360907 28.89795985278809 27.88337800509832 23.541282448504518 39 21.838673453496284 26.189293530380898 29.626642404570454 22.345390611552364 40 20.67868296161507 25.145203727838293 30.738600503274565 23.43751280727207 41 20.49343857837231 27.08026983385382 27.25289136974287 25.173400218031 42 22.0171965803559 26.189129597298383 27.875837083302596 23.91783673904312 43 23.91750887287809 25.339956229866967 27.567970754338077 23.17456414291686 44 20.815567085515692 26.08142556208556 28.888615667084693 24.214391685314055 45 20.57114285948476 25.02258178211654 28.389439430824336 26.016835927574366 46 23.32997270514176 26.084540290653358 27.487315677740348 23.098171326464538 47 19.572298587716492 26.097491004172095 31.077286251752035 23.252924156359374 48 20.67442070146966 25.917328546487322 28.57583134564471 24.83241940639831 49 21.181793591855804 24.373078909189267 31.25400611470398 23.19112138425095 50 19.997868869927295 23.824230948926647 31.384005049138942 24.793895132007115 51 19.493774641191468 23.69029762051131 28.075179711641706 28.74074802665552 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 104.0 1 241.5 2 379.0 3 780.0 4 1181.0 5 873.0 6 565.0 7 544.5 8 524.0 9 517.0 10 510.0 11 518.0 12 526.0 13 597.5 14 669.0 15 696.0 16 723.0 17 792.0 18 861.0 19 981.0 20 1101.0 21 1319.5 22 1538.0 23 1878.0 24 2218.0 25 3089.5 26 4746.0 27 5531.0 28 6545.0 29 7559.0 30 9145.0 31 10731.0 32 12918.0 33 15105.0 34 16933.5 35 18762.0 36 20447.5 37 22133.0 38 24153.5 39 26174.0 40 29928.5 41 33683.0 42 37198.5 43 40714.0 44 46919.5 45 53125.0 46 64827.0 47 76529.0 48 73664.0 49 70799.0 50 67928.5 51 65058.0 52 53382.5 53 41707.0 54 35979.5 55 30252.0 56 25867.5 57 21483.0 58 18843.0 59 16203.0 60 15478.5 61 14754.0 62 12770.5 63 10787.0 64 8406.0 65 6025.0 66 4718.0 67 3411.0 68 2747.5 69 2084.0 70 1469.0 71 854.0 72 818.5 73 783.0 74 611.0 75 374.0 76 309.0 77 196.5 78 84.0 79 58.5 80 33.0 81 23.0 82 13.0 83 13.5 84 14.0 85 9.5 86 5.0 87 3.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 610005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.186215774925095 #Duplication Level Percentage of deduplicated Percentage of total 1 72.70296071846639 25.581420633158615 2 11.30762632472381 7.957451595279102 3 4.431099848040426 4.677409061201647 4 2.2290608304882205 3.13728861427969 5 1.487368283755968 2.6167430684508752 6 1.0197700825599407 2.1529110099460356 7 0.770215548046482 1.8970679326735993 8 0.5461115040856679 1.5372477775941757 9 0.47809595939806115 1.5140148829650006 >10 4.745055361653834 37.57748477646386 >50 0.23064572395635421 4.877977843836382 >100 0.043955025261033266 2.41603921020235 >500 0.005198981482487806 1.2108467434941703 >1k 0.002835808081356985 2.8460968504545026 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC 4370 0.7163875705936837 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGC 4319 0.7080269833853822 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCG 3839 0.6293391037778379 No Hit GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 2473 0.4054065130613684 No Hit CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT 1086 0.17803132761206875 No Hit CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 1027 0.16835927574364143 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTT 960 0.1573757592150884 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCT 954 0.1563921607199941 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTC 712 0.11672035475119057 No Hit TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 674 0.11049089761559332 No Hit GAATATGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC 620 0.1016385111597446 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.917992475471513E-4 0.0 0.0 0.21835886591093515 0.0 2 4.917992475471513E-4 0.0 0.0 1.1688428783370628 0.0 3 4.917992475471513E-4 0.0 0.0 1.5480200981959165 0.0 4 4.917992475471513E-4 0.0 0.0 2.113753165957656 0.0 5 4.917992475471513E-4 0.0 0.0 4.191441053761855 0.0 6 4.917992475471513E-4 0.0 0.0 5.267333874312506 0.0 7 4.917992475471513E-4 0.0 0.0 6.299292628748945 0.0 8 4.917992475471513E-4 0.0 0.0 7.844361931459578 0.0 9 4.917992475471513E-4 0.0 0.0 8.294850042212769 0.0 10 4.917992475471513E-4 0.0 0.0 10.191064007672068 0.0 11 4.917992475471513E-4 0.0 0.0 11.829247301251629 0.0 12 4.917992475471513E-4 0.0 0.0 13.894476274784633 0.0 13 4.917992475471513E-4 0.0 0.0 14.498733616937566 0.0 14 4.917992475471513E-4 0.0 0.0 14.7692232030885 0.0 15 4.917992475471513E-4 0.0 0.0 15.285284546847977 0.0 16 4.917992475471513E-4 0.0 0.0 16.217408054032344 0.0 17 4.917992475471513E-4 0.0 0.0 17.362644568487145 0.0 18 4.917992475471513E-4 0.0 0.0 18.601486873058416 0.0 19 4.917992475471513E-4 0.0 0.0 19.30344833239072 0.0 20 4.917992475471513E-4 0.0 0.0 19.986885353398744 0.0 21 4.917992475471513E-4 0.0 0.0 20.782288669765002 0.0 22 4.917992475471513E-4 0.0 0.0 21.653593003336038 0.0 23 4.917992475471513E-4 0.0 0.0 22.60276555110204 0.0 24 4.917992475471513E-4 0.0 0.0 23.293743493905787 0.0 25 4.917992475471513E-4 0.0 0.0 23.916853140548028 0.0 26 4.917992475471513E-4 0.0 0.0 24.478160015081844 0.0 27 6.557323300628683E-4 0.0 0.0 25.061106056507732 0.0 28 6.557323300628683E-4 0.0 0.0 25.661265071597775 0.0 29 6.557323300628683E-4 0.0 0.0 26.279784591929573 0.0 30 6.557323300628683E-4 0.0 0.0 26.972565798640996 0.0 31 6.557323300628683E-4 0.0 0.0 27.651248760256063 0.0 32 6.557323300628683E-4 0.0 0.0 28.272063343743085 0.0 33 6.557323300628683E-4 0.0 0.0 28.887632068589603 0.0 34 6.557323300628683E-4 0.0 0.0 29.486315685937 0.0 35 6.557323300628683E-4 0.0 0.0 30.100900812288423 0.0 36 6.557323300628683E-4 0.0 0.0 30.707453217596576 0.0 37 6.557323300628683E-4 0.0 0.0 31.29564511766297 0.0 38 6.557323300628683E-4 0.0 0.0 31.918590831222694 0.0 39 8.196654125785855E-4 0.0 0.0 32.53432348915173 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCGC 45 3.8380676E-10 45.000004 28 TCCGCGG 20 7.03068E-4 45.000004 2 CTATCGT 20 7.03068E-4 45.000004 15 TTCGTAG 20 7.03068E-4 45.000004 1 CGACAGA 20 7.03068E-4 45.000004 37 ATACTCG 20 7.03068E-4 45.000004 14 TCTACCG 20 7.03068E-4 45.000004 3 TGCGAAG 40 6.8066583E-9 45.000004 1 GTCCGCG 20 7.03068E-4 45.000004 1 TACTCGA 20 7.03068E-4 45.000004 15 ACCGTCA 20 7.03068E-4 45.000004 41 ACGTACG 20 7.03068E-4 45.000004 1 CGGTCAA 20 7.03068E-4 45.000004 33 TAGTGCG 20 7.03068E-4 45.000004 1 TTACCCG 40 6.8066583E-9 45.000004 27 AGTACGA 20 7.03068E-4 45.000004 22 GTACGAA 20 7.03068E-4 45.000004 23 CTTACGG 40 6.8066583E-9 45.000004 2 AACACGT 45 3.8380676E-10 45.000004 41 GTCGATG 25 3.8886454E-5 45.0 1 >>END_MODULE