##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936768.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 304911 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97131294049739 33.0 31.0 34.0 30.0 34.0 2 32.059879768194655 33.0 31.0 34.0 30.0 34.0 3 31.996113620039946 33.0 31.0 34.0 30.0 34.0 4 35.7034839674528 37.0 35.0 37.0 33.0 37.0 5 30.7274122612828 37.0 35.0 37.0 0.0 37.0 6 33.152824922682356 37.0 35.0 37.0 17.0 37.0 7 35.127715956459426 37.0 35.0 37.0 32.0 37.0 8 35.5435684511218 37.0 35.0 37.0 33.0 37.0 9 37.50664948132406 39.0 37.0 39.0 35.0 39.0 10 37.33948266871317 39.0 37.0 39.0 34.0 39.0 11 37.190435897688175 39.0 37.0 39.0 34.0 39.0 12 37.05177248442988 39.0 37.0 39.0 33.0 39.0 13 36.86255005558999 39.0 35.0 39.0 33.0 39.0 14 38.01898258836185 40.0 37.0 41.0 33.0 41.0 15 38.120241644283084 40.0 37.0 41.0 33.0 41.0 16 38.105020809350926 40.0 37.0 41.0 33.0 41.0 17 38.08289304092014 40.0 37.0 41.0 33.0 41.0 18 38.02247869050313 40.0 36.0 41.0 33.0 41.0 19 37.9876980495948 40.0 36.0 41.0 34.0 41.0 20 37.939546293836564 40.0 36.0 41.0 33.0 41.0 21 37.87539970679969 40.0 36.0 41.0 33.0 41.0 22 37.86779092915638 40.0 36.0 41.0 33.0 41.0 23 37.91082971752413 40.0 36.0 41.0 34.0 41.0 24 37.89842281846178 40.0 36.0 41.0 34.0 41.0 25 37.7228732318611 40.0 36.0 41.0 33.0 41.0 26 37.6569064415518 40.0 36.0 41.0 33.0 41.0 27 37.59242205102473 40.0 36.0 41.0 33.0 41.0 28 37.43499906530102 39.0 36.0 41.0 33.0 41.0 29 37.30468890922269 39.0 36.0 41.0 32.0 41.0 30 37.29373161348722 39.0 36.0 41.0 32.0 41.0 31 37.169980748480704 39.0 35.0 41.0 32.0 41.0 32 36.98797026017428 39.0 35.0 41.0 31.0 41.0 33 36.948991672979986 39.0 35.0 41.0 31.0 41.0 34 36.91701512900486 39.0 35.0 41.0 31.0 41.0 35 36.772792716563195 39.0 35.0 41.0 31.0 41.0 36 36.68791876973937 39.0 35.0 41.0 31.0 41.0 37 36.63253867521998 39.0 35.0 41.0 30.0 41.0 38 36.48339023518338 39.0 35.0 41.0 30.0 41.0 39 36.34974467959503 39.0 35.0 40.0 30.0 41.0 40 36.238738517141066 39.0 35.0 40.0 30.0 41.0 41 36.22612500040996 39.0 35.0 40.0 30.0 41.0 42 36.19791348951006 39.0 35.0 40.0 30.0 41.0 43 36.039483652606826 38.0 35.0 40.0 30.0 41.0 44 35.88049299631696 38.0 35.0 40.0 29.0 41.0 45 35.75404626267993 38.0 35.0 40.0 28.0 41.0 46 35.53391317466408 38.0 35.0 40.0 27.0 41.0 47 35.428305308762226 38.0 34.0 40.0 27.0 41.0 48 35.24438278710837 38.0 34.0 40.0 26.0 41.0 49 35.1144530699122 38.0 34.0 40.0 26.0 41.0 50 34.89288021750609 38.0 34.0 40.0 25.0 41.0 51 32.91562455929763 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 17.0 9 38.0 10 18.0 11 13.0 12 10.0 13 9.0 14 8.0 15 11.0 16 15.0 17 43.0 18 84.0 19 185.0 20 332.0 21 593.0 22 816.0 23 1121.0 24 1601.0 25 2047.0 26 2525.0 27 3163.0 28 3817.0 29 4600.0 30 5692.0 31 7616.0 32 9771.0 33 14017.0 34 21634.0 35 28055.0 36 26545.0 37 39216.0 38 58164.0 39 73099.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.46277438334465 20.56304954560511 23.485869647208528 10.488306423841712 2 33.94662704854859 25.810154438508288 22.895533450744644 17.34768506219848 3 32.559992915965644 25.702582064930425 25.274260357940513 16.46316466116342 4 29.376768958810935 24.68818770067331 25.85541354690385 20.079629793611904 5 21.662386729242304 38.851336947502716 20.269849234694714 19.216427088560266 6 25.781621522345866 35.22568880755368 24.826260777735143 14.166428892365312 7 76.42328417144675 7.223091328289239 11.077986691198415 5.275637809065596 8 74.61423169383853 7.65272489349351 10.827749736808446 6.905293675859513 9 66.7457061240821 9.849103508892759 13.591179065366616 9.814011301658516 10 38.55452902650281 25.971185034321493 19.914335658602017 15.559950280573675 11 29.582730698466108 25.864924518957995 24.579631433434674 19.972713349141223 12 29.229512874248552 21.134363797960717 30.896228735598257 18.739894592192478 13 24.798055826126312 24.38482048860159 31.539695189743895 19.277428495528206 14 18.532620994322933 32.08969174611608 28.880886553781266 20.49680070577972 15 18.598213905041145 27.305344838329876 35.872762871788815 18.223678384840166 16 20.054704487538988 26.10040306843636 32.29729330853922 21.547599135485438 17 19.84939867699099 24.060463545100045 28.39385919169856 27.696278586210404 18 22.41539334428735 25.97544857351817 29.777541643299195 21.831616438895285 19 23.333366129788693 28.772986215649816 26.832419952051584 21.061227702509914 20 24.64063284040261 26.41328125256222 28.11705710846772 20.82902879856745 21 23.685272095791888 27.803850959788267 29.030766354772375 19.48011058964747 22 19.753305062788815 25.81802558779447 27.52934462843256 26.899324720984158 23 20.645368648556463 27.081345048227192 27.941596072296505 24.331690230919843 24 22.594461990548062 24.648831954242386 28.617203052694062 24.13950300251549 25 20.3875885094339 27.384056331191726 26.16271633361866 26.06563882575571 26 18.649704339954937 28.2607055829406 27.847142280862286 25.242447796242185 27 21.807675026483135 27.154809108231582 27.985543322477707 23.051972542807572 28 19.316784241959127 27.971768811226884 30.181921937876954 22.529525008937036 29 20.916923298929852 27.885186169078846 29.30724047344963 21.890650058541674 30 24.362846863510992 25.80425107654365 28.83464355172493 20.99825850822043 31 26.10827421772255 27.99210261354953 25.03812587935496 20.861497289372966 32 24.319883506990564 30.779473354519844 25.218834348383627 19.681808790105965 33 23.91419135419844 28.012436415872173 24.67178947299376 23.40158275693563 34 22.841419299402123 27.436202695212703 27.210235117788468 22.51214288759671 35 21.452489414944033 28.84054691368957 26.043993165218705 23.662970506147694 36 24.617347357097643 28.690339148144865 25.250318945528367 21.44199454922912 37 24.597013554775 27.02887071965262 27.680864252191622 20.69325147338076 38 22.129408253555955 29.737529967761084 25.170623559005744 22.962438219677217 39 23.724627842222812 24.401218716281146 26.94392790027254 24.930225541223507 40 23.15429748352798 25.98331972280436 29.05700351905966 21.805379274608 41 20.40300284345268 28.173139047131784 26.128935984598783 25.29492212481675 42 23.177582966832944 26.28143950201862 26.68221218650688 23.85876534464155 43 24.17721892617846 23.0437734289678 27.230568920111114 25.548438724742628 44 22.662022688587818 24.470091272535264 27.381104650209405 25.486781388667513 45 23.51112291783504 25.104702683733944 25.96495370780326 25.419220690627757 46 24.82822856505669 27.06691460786918 25.88919389592373 22.2156629311504 47 22.132359934538275 25.02303950988977 29.079305108703853 23.765295446868105 48 20.93496134937736 25.19226921954275 28.914994867354736 24.957774563725152 49 21.548583029146208 23.112645985221917 30.701417790765174 24.637353194866698 50 19.969105739051724 22.68432427823201 31.13925046980922 26.207319512907045 51 19.51454686777453 22.870280180118133 28.707393304931607 28.907779647175737 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 334.5 2 421.0 3 649.0 4 877.0 5 628.5 6 380.0 7 353.0 8 326.0 9 353.5 10 381.0 11 400.5 12 420.0 13 419.0 14 418.0 15 404.0 16 390.0 17 459.0 18 528.0 19 542.5 20 557.0 21 826.5 22 1096.0 23 1255.5 24 1415.0 25 1672.5 26 2192.5 27 2455.0 28 3107.5 29 3760.0 30 4309.5 31 4859.0 32 5324.5 33 5790.0 34 6603.5 35 7417.0 36 7695.5 37 7974.0 38 8996.0 39 10018.0 40 11701.5 41 13385.0 42 15385.0 43 17385.0 44 20450.0 45 23515.0 46 29638.5 47 35762.0 48 35767.0 49 35772.0 50 34454.5 51 33137.0 52 28038.0 53 22939.0 54 19559.0 55 16179.0 56 14127.0 57 12075.0 58 11602.0 59 11129.0 60 10623.5 61 10118.0 62 9028.5 63 7939.0 64 6334.5 65 4730.0 66 3952.5 67 3175.0 68 2655.5 69 2136.0 70 1850.5 71 1565.0 72 1225.5 73 886.0 74 804.5 75 576.5 76 430.0 77 299.0 78 168.0 79 109.0 80 50.0 81 36.5 82 23.0 83 20.0 84 17.0 85 10.5 86 4.0 87 4.5 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 304911.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.30909103191404 #Duplication Level Percentage of deduplicated Percentage of total 1 70.14948560055743 24.06765087311468 2 12.330069894568508 8.460669808852275 3 5.03454871746495 5.181923707563331 4 2.635284900163542 3.616569181389578 5 1.6430444542971983 2.818568087598205 6 1.0846508595281124 2.2328031046436285 7 0.796531754874388 1.9129796341456933 8 0.6031300419721835 1.6554274811284624 9 0.4466151890729072 1.3790665060324088 >10 4.997504107301893 38.33202736167349 >50 0.21632922215414843 4.637589753557235 >100 0.053833078324073795 2.8966551827477116 >500 0.0049845442892660925 1.176584464358499 >1k 0.003987635431412874 1.6314848531947792 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTC 1426 0.4676774534208342 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGC 1187 0.3892939251125738 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCG 1133 0.3715838392186573 No Hit GCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 1024 0.335835702877233 TruSeq Adapter, Index 15 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCT 772 0.253188635372289 No Hit CCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 743 0.24367766331814858 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGCT 731 0.239742088675056 Illumina Single End Adapter 1 (95% over 21bp) TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 666 0.21842439269163788 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 528 0.17316528429607328 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 381 0.12495449491818923 No Hit TCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 327 0.10724440902427265 TruSeq Adapter, Index 15 (95% over 22bp) AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 308 0.10101308250604274 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32763658903745685 0.0 2 0.0 0.0 0.0 1.4148390841917806 0.0 3 0.0 0.0 0.0 1.855623444218149 0.0 4 0.0 0.0 0.0 2.7653971158797157 0.0 5 0.0 0.0 0.0 5.033927933068994 0.0 6 0.0 0.0 0.0 6.28478474046525 0.0 7 0.0 0.0 0.0 7.467424920714569 0.0 8 0.0 0.0 0.0 9.129221313760409 0.0 9 0.0 0.0 0.0 9.731364234153572 0.0 10 0.0 0.0 0.0 11.496797426134183 0.0 11 0.0 0.0 0.0 13.569533404829606 0.0 12 0.0 0.0 0.0 15.721636805494063 0.0 13 0.0 0.0 0.0 16.727176126804213 0.0 14 0.0 0.0 0.0 17.09810403691569 0.0 15 0.0 0.0 0.0 17.70254270918399 0.0 16 0.0 0.0 0.0 18.964878275955936 0.0 17 0.0 0.0 0.0 20.166540400313533 0.0 18 0.0 0.0 0.0 21.761104059873208 0.0 19 3.279645535910479E-4 0.0 0.0 22.58167137295801 0.0 20 3.279645535910479E-4 0.0 0.0 23.42978770854446 0.0 21 3.279645535910479E-4 0.0 0.0 24.354647749671216 0.0 22 3.279645535910479E-4 0.0 0.0 25.32673468651508 0.0 23 3.279645535910479E-4 0.0 0.0 26.200760221835225 0.0 24 3.279645535910479E-4 0.0 0.0 26.91047551580625 0.0 25 3.279645535910479E-4 0.0 0.0 27.547054714326475 0.0 26 3.279645535910479E-4 0.0 0.0 28.157396748559417 0.0 27 3.279645535910479E-4 0.0 0.0 28.791680195204503 0.0 28 3.279645535910479E-4 0.0 0.0 29.415468776134674 3.279645535910479E-4 29 3.279645535910479E-4 0.0 0.0 30.034337888760984 3.279645535910479E-4 30 3.279645535910479E-4 0.0 0.0 30.69420257058617 3.279645535910479E-4 31 3.279645535910479E-4 0.0 0.0 31.34554017401799 3.279645535910479E-4 32 3.279645535910479E-4 0.0 0.0 31.977855833341533 3.279645535910479E-4 33 3.279645535910479E-4 0.0 0.0 32.61410706730817 3.279645535910479E-4 34 3.279645535910479E-4 0.0 0.0 33.201491582789735 3.279645535910479E-4 35 3.279645535910479E-4 0.0 0.0 33.98565483042593 3.279645535910479E-4 36 3.279645535910479E-4 0.0 0.0 34.632728894661064 3.279645535910479E-4 37 6.559291071820957E-4 0.0 0.0 35.21289818996363 3.279645535910479E-4 38 6.559291071820957E-4 0.0 0.0 35.81372925214243 3.279645535910479E-4 39 6.559291071820957E-4 0.0 0.0 36.40734509414222 3.279645535910479E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGA 25 3.8840415E-5 45.000004 14 CCTTATC 25 3.8840415E-5 45.000004 43 AGTCCAT 25 3.8840415E-5 45.000004 8 GACGGGA 115 0.0 45.000004 4 TTAGTCG 25 3.8840415E-5 45.000004 1 CGTTTAC 25 3.8840415E-5 45.000004 33 TCTATGT 25 3.8840415E-5 45.000004 32 AAGTAAG 20 7.025125E-4 45.0 1 CGAGTCG 20 7.025125E-4 45.0 35 GGCGTCA 20 7.025125E-4 45.0 36 GCTATCG 20 7.025125E-4 45.0 1 TAAGTAC 40 6.7866495E-9 45.0 9 TGTTGCG 40 6.7866495E-9 45.0 1 CTACGAA 35 1.208009E-7 45.0 11 TATTCGA 20 7.025125E-4 45.0 32 ACGTGAG 20 7.025125E-4 45.0 1 CTGCACG 20 7.025125E-4 45.0 1 CATACGT 20 7.025125E-4 45.0 10 CTCGCGG 20 7.025125E-4 45.0 2 GCGATAT 20 7.025125E-4 45.0 9 >>END_MODULE