##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936767.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 174831 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.995961814552338 33.0 31.0 34.0 30.0 34.0 2 32.08708981816726 33.0 31.0 34.0 30.0 34.0 3 32.03466776487007 33.0 31.0 34.0 30.0 34.0 4 35.7137635773976 37.0 35.0 37.0 33.0 37.0 5 30.957364540613508 37.0 35.0 37.0 0.0 37.0 6 33.28296469161648 37.0 35.0 37.0 17.0 37.0 7 35.20201222895253 37.0 35.0 37.0 32.0 37.0 8 35.62623905371473 37.0 35.0 37.0 33.0 37.0 9 37.61013779020883 39.0 37.0 39.0 35.0 39.0 10 37.337148446213774 39.0 37.0 39.0 34.0 39.0 11 37.159496885563776 39.0 37.0 39.0 34.0 39.0 12 36.89686039661159 39.0 35.0 39.0 33.0 39.0 13 36.57488660477833 39.0 35.0 39.0 33.0 39.0 14 37.7315865035377 40.0 36.0 41.0 33.0 41.0 15 37.8773215276467 40.0 36.0 41.0 33.0 41.0 16 37.912704268693766 40.0 36.0 41.0 33.0 41.0 17 37.89803867735127 40.0 36.0 41.0 33.0 41.0 18 37.84173859327007 40.0 36.0 41.0 33.0 41.0 19 37.81472393339854 40.0 36.0 41.0 34.0 41.0 20 37.77380441683683 39.0 36.0 41.0 33.0 41.0 21 37.726106926117225 39.0 35.0 41.0 33.0 41.0 22 37.74541128289605 39.0 35.0 41.0 33.0 41.0 23 37.74507953394993 39.0 35.0 41.0 34.0 41.0 24 37.7280001830339 39.0 35.0 41.0 34.0 41.0 25 37.57279887434151 39.0 35.0 41.0 33.0 41.0 26 37.521669497972326 39.0 35.0 41.0 33.0 41.0 27 37.46993382180506 39.0 35.0 41.0 33.0 41.0 28 37.4086632233414 39.0 35.0 41.0 33.0 41.0 29 37.3857496668211 39.0 35.0 41.0 33.0 41.0 30 37.32867740846875 39.0 35.0 41.0 33.0 41.0 31 37.27184538211187 39.0 35.0 41.0 33.0 41.0 32 37.17221774170485 39.0 35.0 41.0 33.0 41.0 33 37.073659705658606 39.0 35.0 41.0 32.0 41.0 34 37.03163626587962 39.0 35.0 41.0 32.0 41.0 35 37.00820220670247 39.0 35.0 41.0 32.0 41.0 36 36.86032797387191 39.0 35.0 41.0 32.0 41.0 37 36.80290108733577 39.0 35.0 41.0 31.0 41.0 38 36.73088868678896 39.0 35.0 41.0 31.0 41.0 39 36.70362235530312 39.0 35.0 41.0 31.0 41.0 40 36.55464419925528 39.0 35.0 40.0 31.0 41.0 41 36.503766494500404 39.0 35.0 40.0 31.0 41.0 42 36.46266394403739 38.0 35.0 40.0 31.0 41.0 43 36.31190120745177 38.0 35.0 40.0 30.0 41.0 44 36.154223221282265 38.0 35.0 40.0 30.0 41.0 45 36.1373440636958 38.0 35.0 40.0 30.0 41.0 46 35.93255772717653 38.0 35.0 40.0 30.0 41.0 47 35.85343560352569 38.0 35.0 40.0 30.0 41.0 48 35.70627634687212 38.0 35.0 40.0 29.0 41.0 49 35.53591182341805 38.0 35.0 40.0 29.0 41.0 50 35.35015529282564 37.0 34.0 40.0 28.0 41.0 51 33.523682870886745 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 17.0 10 12.0 11 9.0 12 7.0 13 3.0 14 2.0 15 6.0 16 10.0 17 15.0 18 72.0 19 78.0 20 168.0 21 253.0 22 405.0 23 541.0 24 728.0 25 952.0 26 1110.0 27 1537.0 28 1883.0 29 2286.0 30 2997.0 31 4116.0 32 5388.0 33 8488.0 34 14199.0 35 18944.0 36 14375.0 37 21335.0 38 31988.0 39 42890.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.880661896345615 21.332601197728092 23.952845891174906 10.833891014751389 2 30.87209934164994 26.298539732656106 24.688985363007703 18.140375562686252 3 31.42577689311392 26.046868118354293 25.99939370020191 16.527961288329873 4 27.327533446585562 24.780502313662907 28.04365358546253 19.848310654289 5 23.234437828531554 38.884980352454654 20.76119223707466 17.119389581939128 6 26.153256573490975 34.531061425033315 24.27201125658493 15.04367074489078 7 78.34480155121231 6.286070548129337 10.343703347804452 5.025424552853899 8 78.01591250979517 6.549181781263049 9.388495175340758 6.04641053360102 9 71.3775017016433 7.212107692571683 11.620936790386144 9.789453815398872 10 42.44270180917572 22.736814409343882 19.384434110655434 15.43604967082497 11 33.36650822794584 23.89850770172338 23.613661192809055 19.12132287752172 12 31.25418261063541 19.931247890820277 29.19905508748448 19.615514411059824 13 22.381042263671773 27.89894240723899 31.72263500180174 17.997380327287495 14 17.444274756765104 31.703759630729106 29.042332309487445 21.809633303018344 15 16.392973786113448 25.603010907676556 39.9717441414852 18.032271164724794 16 16.756181684026288 25.478891043350437 35.23231005942882 22.532617213194456 17 17.41510372874376 24.639223021088938 29.172171983229518 28.773501266937785 18 22.243194856747373 25.487470757474362 30.42195034061465 21.847384045163615 19 22.746538085350995 27.31494986587047 27.087301451115646 22.851210597662885 20 25.254674514245185 25.839811017496896 28.02649415721468 20.879020311043238 21 22.35644708318319 27.87720713145838 28.946811492241082 20.819534293117353 22 20.01704503205953 25.665356830310415 27.35270060801574 26.964897529614312 23 18.806733359644458 28.29132133317318 28.733462601026133 24.16848270615623 24 22.428516681824163 23.375717121105524 29.726993496576693 24.46877270049362 25 18.853063815913654 27.569481384880255 29.08122701351591 24.49622778569018 26 17.59070187781343 28.791804657068827 28.21067202040828 25.40682144470946 27 21.123256173104313 28.319348399311334 28.32907207531845 22.228323352265903 28 16.793360445229965 27.201697639434652 33.31560192414389 22.689339991191492 29 18.518454965080565 23.865332807110867 33.13371198471667 24.482500243091902 30 23.10116626913991 25.91531250178744 29.63890843157106 21.344612797501586 31 24.195365810411197 25.55896837517374 27.07414588945896 23.1715199249561 32 24.47792439555914 26.042292270821537 27.401318988051322 22.078464345568005 33 24.59975633611888 26.816182484799604 24.995567147702637 23.588494031378872 34 19.09615571609154 23.538159708518513 30.379051769995023 26.986632805394922 35 20.125721410962587 23.632536563881693 29.62060504144002 26.621136983715704 36 25.539521023159505 23.732061247719226 30.280099067099087 20.44831866202218 37 21.539086317643896 25.471455291109702 30.677625821507625 22.311832569738776 38 18.972607832707013 28.192940611218837 27.91667381642844 24.917777739645715 39 23.419187672666748 23.82014631272486 27.130772002676874 25.62989401193152 40 22.199152324244555 23.990596633320177 30.293254628755772 23.516996413679497 41 19.611510544468658 23.353409864383316 28.771785324113004 28.263294267035022 42 22.006966727868626 21.853103854579565 31.08888011851445 25.051049299037352 43 25.20033632479366 23.00049762341919 27.36642815061402 24.432737901173134 44 21.545950088943037 24.40757073974295 28.35652716051501 25.689952010799 45 20.085682745050935 24.94980867237504 26.487865424324063 28.476643158249964 46 23.268756685027256 26.117221774170485 27.631255326572518 22.98276621422974 47 19.93353581458666 22.67103660106045 33.80750553391561 23.587922050437278 48 21.712968523888783 21.2971383793492 30.80803747619129 26.181855620570722 49 20.267572684478154 20.87387248256888 33.72456829738433 25.133986535568635 50 20.153176496159148 22.518889670596177 32.01320132013201 25.314732513112663 51 19.153925791192638 22.75225789476695 27.84860808437863 30.245208229661785 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 68.0 1 108.5 2 149.0 3 246.5 4 344.0 5 264.5 6 185.0 7 186.0 8 187.0 9 175.0 10 163.0 11 160.0 12 157.0 13 169.5 14 182.0 15 217.0 16 252.0 17 273.5 18 295.0 19 284.0 20 273.0 21 386.0 22 499.0 23 480.0 24 461.0 25 642.5 26 1020.0 27 1216.0 28 1621.5 29 2027.0 30 2092.5 31 2158.0 32 2454.0 33 2750.0 34 3338.5 35 3927.0 36 4559.0 37 5191.0 38 5401.5 39 5612.0 40 6961.5 41 8311.0 42 10101.0 43 11891.0 44 13622.0 45 15353.0 46 18901.0 47 22449.0 48 21450.0 49 20451.0 50 19673.0 51 18895.0 52 16017.5 53 13140.0 54 11139.5 55 9139.0 56 7837.5 57 6536.0 58 5966.5 59 5397.0 60 5265.5 61 5134.0 62 4666.0 63 4198.0 64 3380.5 65 2563.0 66 2246.5 67 1930.0 68 1423.5 69 917.0 70 844.5 71 772.0 72 543.5 73 315.0 74 271.0 75 179.0 76 131.0 77 112.0 78 93.0 79 59.0 80 25.0 81 23.5 82 22.0 83 16.5 84 11.0 85 10.0 86 9.0 87 5.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 174831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.9245843128507 #Duplication Level Percentage of deduplicated Percentage of total 1 73.65662719664586 25.724270867294702 2 10.52260927954929 7.349955099496085 3 4.079660656086736 4.274413576539629 4 2.271573396223325 3.173350263969205 5 1.3691675264907712 2.390880335867209 6 1.0088602826774105 2.1140415601352163 7 0.6976858448385987 1.7056471678363678 8 0.5175322229319183 1.4459678203522257 9 0.38323588660148383 1.204591862999125 >10 5.319445126844528 42.78531839319114 >50 0.13102081593213122 2.8478931082016348 >100 0.03603072438133609 2.499556714770264 >500 0.00163776019915164 0.5016272857788379 >1k 0.0049132805974549205 1.9824859435683604 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGC 1213 0.6938128821547666 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTC 1192 0.6818012823812711 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCG 1061 0.6068717790323227 No Hit GCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGC 877 0.5016272857788379 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGC 485 0.2774107566735876 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGCT 371 0.21220492933175464 TruSeq Adapter, Index 13 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTT 334 0.1910416344927387 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 320 0.18303390131040834 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCT 257 0.1469991019899217 No Hit TCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGC 215 0.12297590244293059 TruSeq Adapter, Index 16 (95% over 21bp) GAATATGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTC 212 0.12125995961814554 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTC 183 0.10467251231188977 No Hit GCGATAAGTCGTTTTAAACTGTCATGTCAGAGGTGTAAACAAACATTTTGG 179 0.10238458854550966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26368321407530704 0.0 2 0.0 0.0 0.0 1.5643678752623962 0.0 3 0.0 0.0 0.0 2.067139122924424 0.0 4 0.0 0.0 0.0 2.827301794304214 0.0 5 0.0 0.0 0.0 5.3297184137824525 0.0 6 0.0 0.0 0.0 6.620107418020831 0.0 7 0.0 0.0 0.0 7.895052936836144 0.0 8 0.0 0.0 0.0 9.654466313182445 0.0 9 0.0 0.0 0.0 10.282501387053783 0.0 10 0.0 0.0 0.0 12.349068529036613 0.0 11 0.0 0.0 0.0 14.183983389673456 0.0 12 0.0 0.0 0.0 16.429008585433934 0.0 13 0.0 0.0 0.0 17.26638868392905 0.0 14 0.0 0.0 0.0 17.659339590804834 0.0 15 0.0 0.0 0.0 18.18327413330588 0.0 16 0.0 0.0 0.0 19.179092952622817 0.0 17 0.0 0.0 0.0 20.288163998375573 0.0 18 0.0 0.0 0.0 21.630031287357504 0.0 19 0.0 0.0 0.0 22.35301519753362 0.0 20 0.0 0.0 0.0 23.059411660403477 0.0 21 0.0 0.0 0.0 23.847029416979826 0.0 22 0.0 0.0 0.0 24.66896603005188 0.0 23 0.0 0.0 0.0 25.410825311300627 0.0 24 0.0 0.0 0.0 25.979374367246084 0.0 25 0.0 0.0 0.0 26.486149481499275 0.0 26 0.0 0.0 0.0 26.951741967957627 0.0 27 0.0 0.0 0.0 27.44593350149573 0.0 28 0.0 0.0 0.0 27.9206776830196 0.0 29 0.0 0.0 0.0 28.425164873506414 0.0 30 0.0 0.0 0.0 29.006869491108557 0.0 31 0.0 0.0 0.0 29.51250064347856 0.0 32 0.0 0.0 0.0 30.045014900103528 0.0 33 0.0 0.0 0.0 30.513467291269855 0.0 34 0.0 0.0 0.0 30.983063644319373 0.0 35 0.0 0.0 0.0 31.578495804519793 0.0 36 0.0 0.0 0.0 32.03665253873741 0.0 37 0.0 0.0 0.0 32.49652521577981 0.0 38 0.0 0.0 0.0 32.997580520617056 0.0 39 0.0 0.0 0.0 33.506643558636625 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.154915E-6 45.000004 4 TCGTTGA 20 7.0168637E-4 45.000004 1 AGATCCC 20 7.0168637E-4 45.000004 14 CTCGTCC 20 7.0168637E-4 45.000004 37 GGTGTCG 20 7.0168637E-4 45.000004 2 CTCCGGT 20 7.0168637E-4 45.000004 20 TTCAGCG 20 7.0168637E-4 45.000004 25 AAATAAC 20 7.0168637E-4 45.000004 28 ACGCATT 20 7.0168637E-4 45.000004 11 CATTGTA 20 7.0168637E-4 45.000004 36 ATGTGCG 20 7.0168637E-4 45.000004 1 CGTTGAG 20 7.0168637E-4 45.000004 2 CGGCACC 20 7.0168637E-4 45.000004 27 GGGTAAC 20 7.0168637E-4 45.000004 7 GCTGCGG 20 7.0168637E-4 45.000004 2 AATGGTC 30 2.154915E-6 45.000004 10 TGTATAA 20 7.0168637E-4 45.000004 43 TAAGTCG 30 2.154915E-6 45.000004 5 AAGCGGC 30 2.154915E-6 45.000004 22 TCTAGTG 30 2.154915E-6 45.000004 14 >>END_MODULE