##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936765.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 331725 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07081166628985 33.0 31.0 34.0 30.0 34.0 2 32.18206948526641 33.0 31.0 34.0 30.0 34.0 3 32.126592810309745 33.0 31.0 34.0 30.0 34.0 4 35.77946491823046 37.0 35.0 37.0 35.0 37.0 5 31.100513979953273 37.0 35.0 37.0 0.0 37.0 6 33.39092923355189 37.0 35.0 37.0 17.0 37.0 7 35.311706986208456 37.0 35.0 37.0 32.0 37.0 8 35.73643530032406 37.0 35.0 37.0 35.0 37.0 9 37.733878966011005 39.0 37.0 39.0 35.0 39.0 10 37.423263245157884 39.0 37.0 39.0 35.0 39.0 11 37.26079131810988 39.0 37.0 39.0 34.0 39.0 12 37.06401989599819 39.0 35.0 39.0 34.0 39.0 13 36.858756500113046 39.0 35.0 39.0 33.0 39.0 14 38.003421508779866 40.0 37.0 41.0 33.0 41.0 15 38.13201296254427 40.0 37.0 41.0 33.0 41.0 16 38.144637877760196 40.0 36.0 41.0 34.0 41.0 17 38.12375310874972 40.0 36.0 41.0 34.0 41.0 18 38.085148843168284 40.0 36.0 41.0 34.0 41.0 19 38.04485040319542 40.0 36.0 41.0 34.0 41.0 20 38.0419172507348 40.0 36.0 41.0 34.0 41.0 21 37.99959605094581 40.0 36.0 41.0 34.0 41.0 22 37.98845730650388 40.0 36.0 41.0 34.0 41.0 23 38.00132639987942 40.0 36.0 41.0 34.0 41.0 24 37.97292636973397 40.0 36.0 41.0 34.0 41.0 25 37.81304695154119 40.0 36.0 41.0 34.0 41.0 26 37.79599366945512 40.0 36.0 41.0 34.0 41.0 27 37.75773909111463 40.0 36.0 41.0 33.0 41.0 28 37.70739317205516 40.0 36.0 41.0 33.0 41.0 29 37.6807415781144 40.0 36.0 41.0 33.0 41.0 30 37.627278619338306 40.0 36.0 41.0 33.0 41.0 31 37.551601477127136 40.0 36.0 41.0 33.0 41.0 32 37.47393172055166 40.0 35.0 41.0 33.0 41.0 33 37.401235963524 39.0 35.0 41.0 33.0 41.0 34 37.25228427161052 39.0 35.0 41.0 33.0 41.0 35 37.188731630115306 39.0 35.0 41.0 32.0 41.0 36 37.07746175295802 39.0 35.0 41.0 32.0 41.0 37 36.958381189238075 39.0 35.0 41.0 31.0 41.0 38 36.94878589192856 39.0 35.0 41.0 32.0 41.0 39 36.8904333408697 39.0 35.0 41.0 31.0 41.0 40 36.80416308689426 39.0 35.0 41.0 31.0 41.0 41 36.8040033159997 39.0 35.0 41.0 31.0 41.0 42 36.74822820107016 39.0 35.0 41.0 31.0 41.0 43 36.67148993895546 39.0 35.0 41.0 31.0 41.0 44 36.49437033687543 39.0 35.0 40.0 31.0 41.0 45 36.487768482930136 39.0 35.0 40.0 31.0 41.0 46 36.38283517974226 38.0 35.0 40.0 31.0 41.0 47 36.27906549099404 38.0 35.0 40.0 30.0 41.0 48 36.15096842263923 38.0 35.0 40.0 30.0 41.0 49 36.06082146356169 38.0 35.0 40.0 30.0 41.0 50 35.82910844826287 38.0 35.0 40.0 29.0 41.0 51 33.966840003014546 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 17.0 10 24.0 11 11.0 12 13.0 13 4.0 14 12.0 15 13.0 16 18.0 17 28.0 18 83.0 19 145.0 20 246.0 21 364.0 22 589.0 23 824.0 24 1166.0 25 1555.0 26 2006.0 27 2533.0 28 3094.0 29 3938.0 30 5171.0 31 6996.0 32 9378.0 33 14891.0 34 24402.0 35 32521.0 36 26476.0 37 40603.0 38 64879.0 39 89694.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.86133092169719 22.5319164970985 27.133921169643532 10.472831411560781 2 30.575928856733743 25.788831110106265 26.227447433868416 17.407792599291582 3 31.885447283141154 25.552490767955383 26.639837214560252 15.922224734343207 4 28.463938503278317 24.076267993066548 29.12593262491522 18.33386087873992 5 22.174089984173637 39.106790263019064 22.1671565302585 16.5519632225488 6 25.671866757103025 35.409450599140854 24.624915215916797 14.293767427839324 7 80.2158414349235 5.336649333031879 9.829226015524908 4.618283216519708 8 80.95048609541035 5.702012208907981 7.826965106639536 5.520536589042129 9 75.75913784007838 6.296480518501771 9.783706383299421 8.160675258120431 10 41.401160599894496 23.357298967518275 18.998869545557316 16.24267088702992 11 32.17695380209511 24.655362122239808 23.829979651820032 19.337704423845054 12 29.405079508629132 21.172356620694853 29.638706760117568 19.783857110558444 13 23.8911749189841 26.076720174843622 30.471625593488582 19.560479312683697 14 18.279900520009043 30.55512849498832 28.687316301153064 22.477654683849575 15 16.929384279146884 25.710452935413368 37.5368151330168 19.82334765242294 16 19.573441856959832 25.811440198959986 32.66892757555204 21.94619036852815 17 20.27944833823197 24.444645414123144 28.21915743462205 27.056748813022836 18 22.521064134448714 25.088552264677066 30.975356093149447 21.415027507724773 19 23.738940387369055 26.26271761248022 27.018765543748586 22.97957645640214 20 24.12480217047253 26.31155324440425 28.312306880699374 21.251337704423847 21 23.144472077775266 27.849272740975206 28.985756274022158 20.02049890722737 22 21.095184264074156 24.988469364684605 27.987338910241917 25.92900746099932 23 19.98703745572387 26.70163539076042 28.456703594845127 24.854623558670585 24 22.154495440500416 24.503127590624764 29.297460245685432 24.044916723189388 25 20.134448715050116 27.791996382545786 28.11575853493104 23.95779636747306 26 18.563870676011756 27.25691461300776 28.96977918456553 25.209435526414953 27 20.222473434320598 28.46484286683247 29.051171904438917 22.26151179440802 28 18.75710302208154 26.40952596277037 31.865249830431836 22.968121184716257 29 19.152611349762605 23.667797121109352 33.81807219835707 23.361519330770967 30 21.288718064661992 25.784309292335518 31.183058256085612 21.743914386916874 31 24.413897053282085 26.34200015072726 27.261134976260458 21.9829678197302 32 25.2486246137614 26.6407415781144 27.812495289773153 20.298138518351045 33 24.561006858090288 24.312909789735475 26.3848066922903 24.74127665988394 34 22.203331072424447 25.93533800587836 28.20529052679177 23.65604039490542 35 21.961866003466728 24.2942196096164 29.58414349235059 24.159770894566282 36 26.06948526641043 24.283970156002713 29.104830808651744 20.541713768935114 37 22.767955384731327 26.18825834652197 31.144170623257217 19.899615645489487 38 22.84000301454518 26.161428894415558 27.110106262717615 23.888461828321653 39 22.367623784761474 25.49702313663426 28.67646393850328 23.45888914010099 40 23.614741125932625 24.02954254276886 29.32881151556259 23.026904815735925 41 21.913633280578793 25.33484060592358 27.41789132564624 25.333634787851384 42 24.184791619564397 22.52317431607506 30.052603813399653 23.239430250960886 43 24.250508704499207 22.602155399804055 28.561609767126384 24.58572612857035 44 21.095787173110256 24.70449920868189 29.22450825231743 24.97520536589042 45 20.82899992463637 24.665008666817396 27.829376742783936 26.676614665762305 46 24.32225487979501 25.304695154118622 27.09985680910393 23.27319315698244 47 20.62943703368754 24.38194287436883 31.20476298138518 23.783857110558447 48 21.7610972944457 22.800813927198735 30.64224885070465 24.795839927650913 49 22.689878664556485 20.651744668023213 32.395508327681064 24.262868339739242 50 21.665536212223984 22.587082673901577 31.183661165121713 24.563719948752734 51 20.96073554902404 22.61903685281483 27.821237470796596 28.59899012736453 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 59.0 1 186.0 2 313.0 3 496.0 4 679.0 5 486.5 6 294.0 7 276.0 8 258.0 9 264.5 10 271.0 11 265.5 12 260.0 13 297.0 14 334.0 15 329.0 16 324.0 17 336.0 18 348.0 19 461.0 20 574.0 21 698.0 22 822.0 23 1057.0 24 1292.0 25 1432.5 26 2182.5 27 2792.0 28 2876.0 29 2960.0 30 3733.0 31 4506.0 32 5407.0 33 6308.0 34 7524.5 35 8741.0 36 9443.0 37 10145.0 38 10383.0 39 10621.0 40 13455.5 41 16290.0 42 18803.0 43 21316.0 44 24932.0 45 28548.0 46 34463.0 47 40378.0 48 38485.0 49 36592.0 50 35186.5 51 33781.0 52 28991.0 53 24201.0 54 20804.0 55 17407.0 56 15739.5 57 14072.0 58 13610.5 59 13149.0 60 11637.5 61 10126.0 62 8994.5 63 7863.0 64 7019.5 65 6176.0 66 4823.5 67 3471.0 68 2925.5 69 2380.0 70 1777.0 71 1174.0 72 934.0 73 694.0 74 475.0 75 225.0 76 194.0 77 144.0 78 94.0 79 68.5 80 43.0 81 37.0 82 31.0 83 19.0 84 7.0 85 5.0 86 3.0 87 2.0 88 1.0 89 2.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 331725.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.419943927801647 #Duplication Level Percentage of deduplicated Percentage of total 1 71.5091597219225 21.753046290650943 2 11.323228314694797 6.889039408294233 3 4.386545321186204 4.003153881217349 4 2.3346501486890348 2.8407970645661687 5 1.4747765276618627 2.243130963875594 6 1.0228449463573668 1.8668931549015826 7 0.7358884446269929 1.5669979655869204 8 0.5719133020282924 1.3918056463411634 9 0.4829267917462579 1.3221545333538876 >10 5.6041504508022335 42.03368630203676 >50 0.5089228509292303 9.231053620263648 >100 0.037994240344421906 2.20054935560486 >500 0.002999545290349098 0.6597085766837514 >1k 0.003999393720465464 1.997983236623127 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGC 1865 0.5622126761624839 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTC 1800 0.5426181324892607 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCG 1704 0.5136784987565002 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 1200 0.3617454216595071 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 979 0.2951239731705479 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCT 631 0.19021780088929083 Illumina Single End Adapter 1 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTT 559 0.1685130755897204 No Hit TCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 391 0.11786871655738941 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCT 351 0.10581053583540584 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.224583615946944 0.0 2 0.0 0.0 0.0 1.3077096992991182 0.0 3 0.0 0.0 0.0 1.750546386313965 0.0 4 0.0 0.0 0.0 2.3525510588589946 0.0 5 0.0 0.0 0.0 4.372296329791243 0.0 6 0.0 0.0 0.0 5.408696962845731 0.0 7 0.0 0.0 0.0 6.382395056145904 0.0 8 0.0 0.0 0.0 7.806466199412164 0.0 9 0.0 0.0 0.0 8.28668324666516 0.0 10 0.0 0.0 0.0 9.947999095636446 0.0 11 0.0 0.0 0.0 11.526113497626046 0.0 12 0.0 0.0 0.0 13.392719873389103 0.0 13 0.0 0.0 0.0 14.01100308990881 0.0 14 0.0 0.0 0.0 14.293164518803225 0.0 15 0.0 0.0 0.0 14.743537568769312 0.0 16 0.0 0.0 0.0 15.62559348858241 0.0 17 0.0 0.0 0.0 16.605019217725527 0.0 18 0.0 0.0 0.0 17.782802019745272 0.0 19 0.0 0.0 0.0 18.3848066922903 0.0 20 0.0 0.0 0.0 19.059461903685282 0.0 21 0.0 0.0 0.0 19.82455347049514 0.0 22 0.0 0.0 0.0 20.575476674956665 0.0 23 0.0 0.0 0.0 21.324591152309896 0.0 24 0.0 0.0 0.0 21.938654005576907 0.0 25 0.0 0.0 0.0 22.433642324214333 0.0 26 0.0 0.0 0.0 22.929233551887858 0.0 27 0.0 0.0 0.0 23.416685507574044 0.0 28 0.0 0.0 0.0 23.880021101816265 0.0 29 0.0 0.0 0.0 24.397317054789358 0.0 30 0.0 0.0 0.0 24.985756274022158 0.0 31 3.014545180495893E-4 0.0 0.0 25.49792750018841 0.0 32 3.014545180495893E-4 0.0 0.0 26.022156907076646 0.0 33 3.014545180495893E-4 0.0 0.0 26.51774813475017 0.0 34 3.014545180495893E-4 0.0 0.0 27.032632451578866 0.0 35 3.014545180495893E-4 0.0 0.0 27.595146582259403 0.0 36 3.014545180495893E-4 0.0 0.0 28.077775265656793 0.0 37 3.014545180495893E-4 0.0 0.0 28.591453764413295 0.0 38 3.014545180495893E-4 0.0 0.0 29.083427537870225 0.0 39 3.014545180495893E-4 0.0 0.0 29.612178762529204 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAAGT 20 7.026024E-4 45.0 16 GCCCCGT 20 7.026024E-4 45.0 10 CGGGTAT 70 0.0 45.0 6 AACCGGC 20 7.026024E-4 45.0 16 CTCACGT 20 7.026024E-4 45.0 45 GTCGACG 20 7.026024E-4 45.0 1 ACGTTAG 25 3.8847866E-5 45.0 1 ACTTCGC 20 7.026024E-4 45.0 14 GGTCATA 25 3.8847866E-5 45.0 8 GGATATC 20 7.026024E-4 45.0 8 TACGGGT 70 0.0 45.0 4 CGCGACT 25 3.8847866E-5 45.0 13 CGTTATT 25 3.8847866E-5 45.0 1 GTAATAC 20 7.026024E-4 45.0 28 TGATTCG 20 7.026024E-4 45.0 34 CTTTGCG 20 7.026024E-4 45.0 1 TCGTACC 20 7.026024E-4 45.0 38 CTATTAC 25 3.8847866E-5 45.0 16 CCGCGAC 25 3.8847866E-5 45.0 12 CGCGTCG 20 7.026024E-4 45.0 14 >>END_MODULE