SRR2936764.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936764.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	607548
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGC	2460	0.40490627901005355	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC	2227	0.3665553997379631	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCG	2216	0.3647448432058043	No Hit
GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	1458	0.23998103853522684	No Hit
CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGCT	886	0.1458320988629705	No Hit
CCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC	852	0.1402358332181161	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	30	2.1638061E-6	45.000004	1
CGTCTAC	30	2.1638061E-6	45.000004	27
AATGCGT	30	2.1638061E-6	45.000004	23
TACGATG	35	1.2106648E-7	45.000004	1
GGTTACG	30	2.1638061E-6	45.000004	1
CTAGATC	25	3.8886268E-5	45.0	34
TCCGCGA	25	3.8886268E-5	45.0	32
CGAGTTA	20	7.0306583E-4	45.0	29
TCCGATC	25	3.8886268E-5	45.0	12
TACGGAA	20	7.0306583E-4	45.0	13
TATGCGT	20	7.0306583E-4	45.0	14
ACGGGTC	50	2.1827873E-11	45.0	5
TACGCTC	20	7.0306583E-4	45.0	10
CTAACGC	20	7.0306583E-4	45.0	17
CCGTAAT	25	3.8886268E-5	45.0	19
TCTACCG	25	3.8886268E-5	45.0	1
TCAGCGA	20	7.0306583E-4	45.0	18
TACGACG	25	3.8886268E-5	45.0	1
GTACTAA	20	7.0306583E-4	45.0	28
GTCCGCG	25	3.8886268E-5	45.0	31