##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936763.fastq File type Conventional base calls Encoding Illumina 1.5 Total Sequences 513174 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.013695159926264 33.0 31.0 34.0 30.0 34.0 2 32.100642277278276 33.0 31.0 34.0 30.0 34.0 3 32.04562585010152 33.0 31.0 34.0 30.0 34.0 4 35.74027717694194 37.0 35.0 37.0 35.0 37.0 5 30.8704513478859 37.0 35.0 37.0 0.0 37.0 6 33.22444434051608 37.0 35.0 37.0 17.0 37.0 7 35.17605724374189 37.0 35.0 37.0 32.0 37.0 8 35.606273895403895 37.0 35.0 37.0 33.0 37.0 9 37.63228456624849 39.0 37.0 39.0 35.0 39.0 10 37.36915354246318 39.0 37.0 39.0 34.0 39.0 11 37.16608596694299 39.0 37.0 39.0 34.0 39.0 12 37.006574768012406 39.0 35.0 39.0 33.0 39.0 13 36.75212695888724 39.0 35.0 39.0 33.0 39.0 14 37.9635932451761 40.0 37.0 41.0 33.0 41.0 15 38.02768846434153 40.0 36.0 41.0 33.0 41.0 16 38.05013504191561 40.0 36.0 41.0 33.0 41.0 17 38.01351393484471 40.0 36.0 41.0 33.0 41.0 18 37.96723723337504 40.0 36.0 41.0 33.0 41.0 19 37.91448319673249 40.0 36.0 41.0 33.0 41.0 20 37.92132103341167 40.0 36.0 41.0 33.0 41.0 21 37.9013706851867 40.0 36.0 41.0 33.0 41.0 22 37.912142859926654 40.0 36.0 41.0 33.0 41.0 23 37.958413715425955 40.0 36.0 41.0 34.0 41.0 24 37.918427278077225 40.0 36.0 41.0 34.0 41.0 25 37.75451016614248 40.0 36.0 41.0 33.0 41.0 26 37.71702580411323 40.0 36.0 41.0 33.0 41.0 27 37.666577028454284 40.0 36.0 41.0 33.0 41.0 28 37.60815045189351 40.0 36.0 41.0 33.0 41.0 29 37.55426424565547 40.0 36.0 41.0 33.0 41.0 30 37.4736931333232 40.0 36.0 41.0 33.0 41.0 31 37.38970602563653 39.0 35.0 41.0 33.0 41.0 32 37.32543542735992 39.0 35.0 41.0 33.0 41.0 33 37.22425726946416 39.0 35.0 41.0 32.0 41.0 34 37.124986846566664 39.0 35.0 41.0 32.0 41.0 35 37.08079325920643 39.0 35.0 41.0 32.0 41.0 36 36.92785682828826 39.0 35.0 41.0 31.0 41.0 37 36.88008355840319 39.0 35.0 41.0 31.0 41.0 38 36.77139137992182 39.0 35.0 41.0 31.0 41.0 39 36.58839886666121 39.0 35.0 41.0 30.0 41.0 40 36.37200053003465 39.0 35.0 41.0 30.0 41.0 41 36.35488158012682 39.0 35.0 41.0 30.0 41.0 42 36.30366893100586 39.0 35.0 41.0 30.0 41.0 43 36.19950932822006 39.0 35.0 40.0 30.0 41.0 44 36.039655165694285 38.0 35.0 40.0 30.0 41.0 45 36.01707997677201 38.0 35.0 40.0 30.0 41.0 46 35.73600572125634 38.0 35.0 40.0 29.0 41.0 47 35.59703726221515 38.0 35.0 40.0 28.0 41.0 48 35.51757493559689 38.0 35.0 40.0 27.0 41.0 49 35.38698570075647 38.0 34.0 40.0 27.0 41.0 50 35.21646459095745 38.0 34.0 40.0 26.0 41.0 51 33.372312315121185 36.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 22.0 10 34.0 11 25.0 12 18.0 13 8.0 14 17.0 15 17.0 16 24.0 17 54.0 18 108.0 19 239.0 20 429.0 21 659.0 22 1011.0 23 1513.0 24 2084.0 25 2875.0 26 4032.0 27 4922.0 28 6120.0 29 7595.0 30 9856.0 31 12558.0 32 16388.0 33 24018.0 34 38294.0 35 46924.0 36 41795.0 37 62869.0 38 97115.0 39 131479.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.68070089287454 21.477510551976522 25.07628991336272 9.765498641786216 2 29.523904172853655 27.586159860008497 25.55390569280595 17.336030274331904 3 31.42852132025395 27.438451675260247 25.793395612404368 15.339631392081438 4 28.600045988300266 25.046085733104174 28.1662749866517 18.187593291943863 5 23.89053225611586 39.02925713305818 20.101369126261268 16.97884148456469 6 25.859260211935915 35.89464781925818 23.96243769169911 14.283654277106791 7 78.05188883302739 6.628161208478995 11.171064785043669 4.1488851734499415 8 78.96035262893287 7.623535097257459 8.16740520759041 5.2487070662192545 9 72.03813911071099 8.46165238301239 10.193033941703982 9.307174564572641 10 41.077295420266815 27.675603206709614 17.493286877355438 13.753814495668134 11 31.652616851204463 25.57241793231925 24.729623870266227 18.04534134621006 12 30.361436861571317 20.796844734924218 29.245830848795922 19.59588755470854 13 24.881229368596227 26.334537603230096 30.182745033848168 18.60148799432551 14 19.47039405737625 30.200088079286946 27.831300884300454 22.49821697903635 15 18.494701602185614 26.30238476618067 36.51393094739796 18.688982684235754 16 20.53124281432808 26.58571946357376 31.701528136655405 21.181509585442754 17 20.92370229201012 25.550787841940547 28.769773994785396 24.755735871263937 18 21.755194144676075 27.29444593841465 28.97438295782717 21.975976959082104 19 23.847466941037542 28.89780074594582 25.62834438221734 21.6263879307993 20 24.901495399221314 27.352126179424523 28.284363588178667 19.46201483317549 21 23.582839348836846 29.12150654553816 27.607789950387197 19.687864155237794 22 20.513899768889303 26.026260098913816 28.136070806393153 25.323769325803724 23 20.481746931839883 27.997911039920183 28.501054223323862 23.019287804916072 24 23.281771874646807 24.429140993113446 28.653634050049305 23.63545308219045 25 20.267784416201913 29.002833346973933 27.051448436592658 23.6779338002315 26 19.20167428591472 29.134562546037017 27.631173831877685 24.032589336170577 27 20.63724974375163 29.158531024564766 26.81858395008321 23.385635281600393 28 17.589550522824617 28.266046214344453 30.62255687154844 23.521846391282487 29 20.20464793617759 25.33000502753452 30.844314014349912 23.62103302193798 30 20.68849941735162 27.67151102744878 28.693191782904044 22.946797772295557 31 23.110679808408065 29.957480308823126 24.565352102795543 22.366487779973266 32 25.306036549006773 29.010238242779252 24.313975376772788 21.369749831441187 33 22.734589047769372 28.707806708835598 24.057727008772854 24.499877234622176 34 20.70194514920865 29.59230202621333 27.515423618499767 22.19032920607825 35 19.887991207660562 26.484389310448307 26.23866368911909 27.38895579277204 36 20.179120532217144 29.50091002272134 26.881525564428436 23.43844388063308 37 20.836012736420788 29.306239209313024 27.094124020312798 22.763624033953395 38 19.94859443385674 30.01262729600486 24.525404638582625 25.51337363155577 39 22.966479205883385 27.61383078643891 25.850296390697892 23.569393616979816 40 21.541621360396277 26.85755708590069 28.360945800060016 23.239875753643013 41 17.842096442921893 27.691387326715695 26.92907279012577 27.537443440236647 42 20.093574499097773 25.16281027487753 28.01642327943349 26.727191946591216 43 22.35635476466072 24.984508178512552 25.568130887379333 27.0910061694474 44 21.01450969846485 26.366105843242256 26.35597282792971 26.263411630363194 45 20.541765560998805 26.272180585922122 26.033859860398227 27.152193992680846 46 22.97057138514422 27.743416463032034 25.078043704474506 24.20796844734924 47 19.09800574464022 25.63321602419452 30.041077685151624 25.227700546013633 48 20.3422231056133 24.429530724471622 28.548016851983927 26.680229317931147 49 19.99848004770312 23.08417807605218 31.314914629345992 25.602427246898714 50 19.358151426221905 23.894429569697607 30.305900143031412 26.44151886104908 51 18.87118209418248 23.825252253621578 27.477229945398634 29.826335706797302 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 99.0 1 317.5 2 536.0 3 838.0 4 1140.0 5 812.0 6 484.0 7 459.0 8 434.0 9 407.0 10 380.0 11 412.5 12 445.0 13 452.5 14 460.0 15 579.0 16 698.0 17 680.0 18 662.0 19 880.0 20 1098.0 21 1192.0 22 1286.0 23 1602.5 24 1919.0 25 2506.5 26 3931.5 27 4769.0 28 5645.0 29 6521.0 30 8102.0 31 9683.0 32 10248.0 33 10813.0 34 12623.5 35 14434.0 36 15320.5 37 16207.0 38 17151.0 39 18095.0 40 21997.0 41 25899.0 42 29197.5 43 32496.0 44 38553.0 45 44610.0 46 54019.5 47 63429.0 48 58331.5 49 53234.0 50 50244.0 51 47254.0 52 41120.0 53 34986.0 54 29621.5 55 24257.0 56 22372.0 57 20487.0 58 20680.5 59 20874.0 60 19193.0 61 17512.0 62 15487.5 63 13463.0 64 11662.5 65 9862.0 66 7484.0 67 5106.0 68 3873.0 69 2640.0 70 2214.0 71 1788.0 72 1307.5 73 827.0 74 660.5 75 476.0 76 458.0 77 294.0 78 130.0 79 88.5 80 47.0 81 38.5 82 30.0 83 27.5 84 25.0 85 15.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 513174.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.804897109889733 #Duplication Level Percentage of deduplicated Percentage of total 1 72.29436520382477 22.27020481728615 2 11.016098756552914 6.786995774959935 3 4.384926557573666 4.052316343214392 4 2.367871811235941 2.917681900581257 5 1.4713026126528943 2.266166280014218 6 0.9860784697362543 1.8225627481501705 7 0.7182332323591902 1.5487570576609866 8 0.5775182451386134 1.423231209646325 9 0.44697616950786717 1.2392149421036236 >10 5.076992800896272 37.89784514456609 >50 0.6004788010148709 11.1952159992784 >100 0.049615833134703316 2.681380913554787 >500 0.006361004248038887 1.2060727508718 >1k 0.0031805021240194436 2.6923541181118655 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGC 4006 0.7806319104241446 No Hit GAATCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTC 3540 0.6898245039694139 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCG 3349 0.6526051592637195 No Hit GCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCTGC 1702 0.3316613858067634 RNA PCR Primer, Index 40 (96% over 27bp) GAATGCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTT 1143 0.22273147119690398 No Hit CTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCTGCT 724 0.14108275165928125 Illumina PCR Primer Index 8 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCTGC 698 0.13601624400300874 Illumina PCR Primer Index 8 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCT 685 0.13348299017487245 No Hit GAATATGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTC 652 0.1270524227649881 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGC 638 0.12432430325776442 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTC 593 0.1155553476988312 RNA PCR Primer, Index 40 (95% over 21bp) GAATAATACCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCG 573 0.1116580341170831 No Hit GAACTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCT 540 0.10522746670719872 RNA PCR Primer, Index 40 (96% over 25bp) GCTTGTGGGATTGTGATGATCTAGTGGGCATGTCTGTCACCTGGACAATTG 540 0.10522746670719872 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.897313581748101E-4 0.0 0.0 0.21980848601059289 0.0 2 3.897313581748101E-4 0.0 0.0 1.1497075066156899 0.0 3 3.897313581748101E-4 0.0 0.0 1.5256034015752942 0.0 4 3.897313581748101E-4 0.0 0.0 2.12442563341089 0.0 5 3.897313581748101E-4 0.0 0.0 4.390908346876498 0.0 6 3.897313581748101E-4 0.0 0.0 5.577640332518794 0.0 7 3.897313581748101E-4 0.0 0.0 6.565999056850114 0.0 8 3.897313581748101E-4 0.0 0.0 7.949545378370689 0.0 9 3.897313581748101E-4 0.0 0.0 8.364609274826861 0.0 10 3.897313581748101E-4 0.0 0.0 10.222263793567095 0.0 11 3.897313581748101E-4 0.0 0.0 11.688628028699817 0.0 12 3.897313581748101E-4 0.0 0.0 13.91945032289243 0.0 13 3.897313581748101E-4 0.0 0.0 14.643766052060315 0.0 14 3.897313581748101E-4 0.0 0.0 14.983222065030574 0.0 15 3.897313581748101E-4 0.0 0.0 15.485585785717905 0.0 16 3.897313581748101E-4 0.0 0.0 16.318441698137473 0.0 17 3.897313581748101E-4 0.0 0.0 17.27386812270302 0.0 18 3.897313581748101E-4 0.0 0.0 18.3201019537233 0.0 19 3.897313581748101E-4 0.0 0.0 18.939385081863072 0.0 20 3.897313581748101E-4 0.0 0.0 19.588092927545045 0.0 21 3.897313581748101E-4 0.0 0.0 20.376324599453596 0.0 22 3.897313581748101E-4 0.0 0.0 21.19242206347165 0.0 23 3.897313581748101E-4 0.0 0.0 21.99526866131176 0.0 24 3.897313581748101E-4 0.0 0.0 22.587270594379294 0.0 25 3.897313581748101E-4 0.0 0.0 23.158616765463567 0.0 26 3.897313581748101E-4 0.0 0.0 23.658836963680933 0.0 27 3.897313581748101E-4 0.0 0.0 24.155744445353818 0.0 28 3.897313581748101E-4 0.0 0.0 24.703901600626686 0.0 29 3.897313581748101E-4 0.0 0.0 25.244653860094235 0.0 30 3.897313581748101E-4 0.0 0.0 25.85049125637698 0.0 31 3.897313581748101E-4 0.0 0.0 26.399038143008024 0.0 32 3.897313581748101E-4 0.0 0.0 26.920498700245922 0.0 33 3.897313581748101E-4 0.0 0.0 27.43923113797659 0.0 34 3.897313581748101E-4 0.0 0.0 27.96497874015441 0.0 35 3.897313581748101E-4 0.0 0.0 28.53963762778317 0.0 36 3.897313581748101E-4 0.0 0.0 29.080389887250718 0.0 37 3.897313581748101E-4 0.0 0.0 29.603993966958576 0.0 38 3.897313581748101E-4 0.0 0.0 30.136756733583542 0.0 39 3.897313581748101E-4 0.0 0.0 30.73246111455374 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGC 20 7.0296315E-4 45.000004 20 ACTGCGC 20 7.0296315E-4 45.000004 25 GATCGGT 20 7.0296315E-4 45.000004 10 TAGCGTT 20 7.0296315E-4 45.000004 1 GACGTAG 20 7.0296315E-4 45.000004 1 GGCCGAA 20 7.0296315E-4 45.000004 7 GTCTCGC 20 7.0296315E-4 45.000004 31 ACCGAAT 40 6.8030204E-9 45.000004 28 TATTGCG 30 2.163144E-6 45.000004 1 ACGTATG 20 7.0296315E-4 45.000004 1 TAGTGCG 30 2.163144E-6 45.000004 1 GCGTCAG 20 7.0296315E-4 45.000004 1 ATCGCGG 20 7.0296315E-4 45.000004 2 GCGTAAG 60 0.0 45.000004 1 CGGGTAC 25 3.8877777E-5 45.0 6 TAGCGAG 45 3.8380676E-10 45.0 1 CGTCTTA 25 3.8877777E-5 45.0 26 ATTCGTC 50 2.1827873E-11 45.0 37 TTCGTCA 45 3.8380676E-10 45.0 38 TACGGAC 25 3.8877777E-5 45.0 24 >>END_MODULE