SRR2936762.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936762.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1187633
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTC	11522	0.9701650257276447	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGC	9474	0.7977211815434567	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCG	8961	0.7545260194016165	No Hit
GCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	3597	0.3028713415676392	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3493	0.2941144276051608	No Hit
GAACTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCT	2233	0.18802104690590443	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCT	1991	0.16764438172398374	No Hit
CCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC	1570	0.13219572039510522	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTC	1529	0.12874347546758974	No Hit
GAATATGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTC	1510	0.1271436546475216	No Hit
CTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGCT	1275	0.10735639713615233	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGC	1206	0.10154652152643115	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAACG	20	7.033382E-4	45.0	37
AGTACGG	165	0.0	42.272728	2
ACGACCA	120	0.0	41.250004	28
TAGTACG	60	3.6379788E-12	41.250004	1
ATTTACG	55	6.184564E-11	40.909092	1
TGTCGCG	50	1.0822987E-9	40.5	1
CGTTTTT	1775	0.0	40.30986	1
GCGTAAG	95	0.0	40.263157	1
TACGGCT	1230	0.0	40.060974	7
CACGACC	125	0.0	39.600002	27
CTCGTAC	80	0.0	39.375	29
TATTACG	40	3.4583536E-7	39.375	1
GCTAGCG	40	3.4583536E-7	39.375	1
GCCTACG	40	3.4583536E-7	39.375	1
CGTTATT	350	0.0	39.214287	1
ACGGCTG	1275	0.0	38.823532	8
GTCGATG	35	6.248467E-6	38.571426	1
CTATCGT	35	6.248467E-6	38.571426	38
TACTACG	35	6.248467E-6	38.571426	1
CGGTCCA	35	6.248467E-6	38.571426	19