##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936759.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 286976 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.947988681980373 33.0 31.0 34.0 30.0 34.0 2 32.04619201605709 33.0 31.0 34.0 30.0 34.0 3 32.004728618421055 33.0 31.0 34.0 30.0 34.0 4 35.68440566458519 37.0 35.0 37.0 33.0 37.0 5 30.9136269235058 37.0 35.0 37.0 0.0 37.0 6 33.23370943911686 37.0 35.0 37.0 17.0 37.0 7 35.13624135816236 37.0 35.0 37.0 32.0 37.0 8 35.53950853033006 37.0 35.0 37.0 33.0 37.0 9 37.578884645405886 39.0 37.0 39.0 35.0 39.0 10 37.357928886039254 39.0 37.0 39.0 34.0 39.0 11 37.121888241525426 39.0 37.0 39.0 34.0 39.0 12 36.911156333630686 39.0 35.0 39.0 33.0 39.0 13 36.6350809823818 39.0 35.0 39.0 33.0 39.0 14 37.80903281110616 40.0 36.0 41.0 33.0 41.0 15 37.89825281556646 40.0 36.0 41.0 33.0 41.0 16 37.953794045495094 40.0 36.0 41.0 33.0 41.0 17 37.90762990633363 40.0 36.0 41.0 33.0 41.0 18 37.870926488626225 40.0 36.0 41.0 33.0 41.0 19 37.83408368644068 40.0 36.0 41.0 33.0 41.0 20 37.82086306868867 40.0 36.0 41.0 33.0 41.0 21 37.81259059991079 39.0 36.0 41.0 33.0 41.0 22 37.819737539027656 40.0 36.0 41.0 33.0 41.0 23 37.85528406556646 39.0 36.0 41.0 34.0 41.0 24 37.813412968331846 40.0 35.0 41.0 34.0 41.0 25 37.661870679081176 39.0 35.0 41.0 33.0 41.0 26 37.563134199375554 39.0 35.0 41.0 33.0 41.0 27 37.555001115075825 39.0 35.0 41.0 33.0 41.0 28 37.56374400646744 39.0 36.0 41.0 33.0 41.0 29 37.54840126003568 39.0 36.0 41.0 33.0 41.0 30 37.49436886708296 39.0 36.0 41.0 33.0 41.0 31 37.435583463425516 39.0 35.0 41.0 33.0 41.0 32 37.33733831400535 39.0 35.0 41.0 33.0 41.0 33 37.20925791703836 39.0 35.0 41.0 32.0 41.0 34 37.16558527542373 39.0 35.0 41.0 32.0 41.0 35 37.147977531222125 39.0 35.0 41.0 32.0 41.0 36 36.943650340098124 39.0 35.0 41.0 32.0 41.0 37 36.935576494201605 39.0 35.0 41.0 32.0 41.0 38 36.8961237176628 39.0 35.0 41.0 31.0 41.0 39 36.771907755352366 39.0 35.0 41.0 31.0 41.0 40 36.60466728925067 39.0 35.0 41.0 31.0 41.0 41 36.585261485281 39.0 35.0 40.0 31.0 41.0 42 36.535832264719 39.0 35.0 40.0 31.0 41.0 43 36.39277849018733 39.0 35.0 40.0 30.0 41.0 44 36.27365354594112 38.0 35.0 40.0 30.0 41.0 45 36.23369201605709 38.0 35.0 40.0 30.0 41.0 46 36.02222485504014 38.0 35.0 40.0 30.0 41.0 47 35.84995260927743 38.0 35.0 40.0 29.0 41.0 48 35.74810088648528 38.0 35.0 40.0 29.0 41.0 49 35.61784260704728 38.0 35.0 40.0 28.0 41.0 50 35.40381077163247 38.0 34.0 40.0 27.0 41.0 51 33.45732395740411 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 16.0 10 17.0 11 11.0 12 11.0 13 5.0 14 5.0 15 7.0 16 13.0 17 46.0 18 73.0 19 123.0 20 214.0 21 353.0 22 523.0 23 790.0 24 1041.0 25 1497.0 26 2043.0 27 2349.0 28 3149.0 29 4000.0 30 5167.0 31 6883.0 32 9192.0 33 13756.0 34 22232.0 35 29117.0 36 23583.0 37 34711.0 38 53662.0 39 72370.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.33584690008921 20.858887154326496 23.227726360392506 10.577539585191793 2 29.129962087421944 28.55116804192685 25.405260370205173 16.913609500446032 3 30.291383251561104 28.591589540588757 26.084062778768956 15.032964429081177 4 27.800234165923282 24.087380129348794 30.711975914362178 17.400409790365746 5 23.276162466547724 38.189604705619985 20.826480263157894 17.707752564674397 6 23.74937276984835 36.22672279214987 24.949821587867977 15.074082850133811 7 74.8198455619982 6.521799732381801 13.686858831400537 4.971495874219447 8 73.78247658340767 8.59375 10.835400869759143 6.788372546833185 9 68.92248829170383 7.018356935771633 12.371069357716324 11.688085414808207 10 42.2739183764496 21.619577943800177 20.740410347903655 15.366093331846564 11 32.1608775646744 24.106893956289028 23.735085860838538 19.997142618198037 12 29.097555196253346 20.367208407671722 29.43556255575379 21.09967384032114 13 21.799732381801963 27.398109946476364 31.606824264049955 19.195333407671722 14 17.96143231489741 30.947187221231044 28.342788247100803 22.748592216770742 15 16.25257861284567 24.431659790365746 40.22217885816236 19.09358273862623 16 18.553816347011598 25.180154438001782 31.965739295272076 24.30028991971454 17 18.03704839429081 25.082236842105267 29.80702219000892 27.073692573595004 18 19.266419491525426 26.786212087421944 32.03125 21.916118421052634 19 21.99487065120428 27.511011373773414 27.475468331846564 23.01864964317574 20 23.14130798394291 27.273709299732378 29.862079058876002 19.722903657448708 21 21.28888826940232 29.071072145405886 29.723739964317573 19.91629962087422 22 19.215892618198037 25.057496097234612 27.503345227475467 28.223266057091884 23 18.044017618198037 28.41561663693131 29.97254125780553 23.56782448706512 24 22.768106043710972 22.46599018733274 29.215683541480818 25.550220227475467 25 17.65025646743979 29.830020628902766 28.591589540588757 23.92813336306869 26 17.454769736842106 28.665114852809992 28.223962979482604 25.656152430865298 27 21.254390611061552 29.551251672613738 26.577135370205173 22.617222346119537 28 16.30589317573595 25.934224464763606 33.197201159678855 24.562681199821586 29 19.318688670829616 26.465976248884925 30.494187667261375 23.721147413024084 30 23.019346565566458 28.333031333630686 27.830550289919714 20.81707181088314 31 24.1971454058876 26.424857827832295 23.761917372881356 25.61607939339875 32 25.62026092774309 28.17343610615522 26.05235280999108 20.153950156110614 33 23.517297613737735 28.067503902765388 23.775158898305087 24.640039585191793 34 23.479663804638715 26.61128456735058 26.498383140053523 23.41066848795718 35 23.42181924620874 25.282950490633365 26.192782671721677 25.102447591436217 36 23.73334355486173 30.449933095450493 24.115257024977698 21.70146632471008 37 23.43157615967886 25.766614629794827 30.44644848349688 20.355360727029435 38 19.928147301516503 28.967230709188225 25.42825880909902 25.676363180196255 39 23.727071253345226 25.920286016949152 29.933513603925064 20.419129125780554 40 25.33068967439786 24.762001003568244 28.64107103033006 21.266238291703836 41 22.511638603925064 26.772970561998218 24.63341882247993 26.08197201159679 42 23.786309656556647 23.639607493309544 28.97977531222123 23.594307537912577 43 23.538205285459412 25.184335972346116 26.4436747323818 24.833784009812668 44 20.655385816235505 24.355695249776986 29.488528657448704 25.500390276538802 45 20.308666926851025 24.9027793264942 25.859305307760927 28.929248438893847 46 25.121264495985727 27.0458156779661 26.509533898305083 21.323385927743086 47 19.766112845673504 23.701633586083855 33.36655330062444 23.1657002676182 48 22.01055140499554 23.727071253345226 29.091979817127566 25.17039752453167 49 20.61879739072257 21.19410682426405 33.78470673505799 24.402389049955396 50 21.203863737734167 22.206386596788583 30.750306645851914 25.839443019625335 51 20.319120762711865 22.660779995539695 26.65449375557538 30.36560548617306 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 76.0 1 157.5 2 239.0 3 388.5 4 538.0 5 402.0 6 266.0 7 272.0 8 278.0 9 297.0 10 316.0 11 311.0 12 306.0 13 299.0 14 292.0 15 308.5 16 325.0 17 369.5 18 414.0 19 439.0 20 464.0 21 588.0 22 712.0 23 891.0 24 1070.0 25 1365.5 26 2067.5 27 2474.0 28 2628.5 29 2783.0 30 3537.0 31 4291.0 32 5158.5 33 6026.0 34 6809.0 35 7592.0 36 8359.0 37 9126.0 38 9300.0 39 9474.0 40 11086.5 41 12699.0 42 15614.5 43 18530.0 44 21698.0 45 24866.0 46 32644.5 47 40423.0 48 36547.5 49 32672.0 50 32062.5 51 31453.0 52 25664.5 53 19876.0 54 17069.0 55 14262.0 56 12145.5 57 10029.0 58 9310.5 59 8592.0 60 7770.5 61 6949.0 62 6589.0 63 6229.0 64 5170.0 65 4111.0 66 3485.0 67 2859.0 68 2522.5 69 2186.0 70 1683.0 71 1180.0 72 910.5 73 641.0 74 497.5 75 272.5 76 191.0 77 121.5 78 52.0 79 53.0 80 54.0 81 31.0 82 8.0 83 7.0 84 6.0 85 11.0 86 16.0 87 11.0 88 6.0 89 5.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 286976.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.283103813559322 #Duplication Level Percentage of deduplicated Percentage of total 1 71.66026176552492 22.41755408117752 2 11.495405179615705 7.192239072256913 3 4.716235032024506 4.426154103479036 4 2.409356725146199 3.014886262265834 5 1.392369813422445 2.1778824710080285 6 1.0036201615148983 1.8837812221231043 7 0.7641325536062379 1.6733106601248886 8 0.5368978000556948 1.3436663693131132 9 0.4232804232804233 1.1917372881355932 >10 5.127262600946811 38.641558876003565 >50 0.4154831523252576 7.721900089206065 >100 0.04232804232804233 2.298101583407672 >500 0.008911166805903648 1.8140889830508475 >1k 0.004455583402951824 4.203138938447815 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGC 3950 1.376421721677074 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCG 3277 1.1419073371989295 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 3237 1.1279688893844781 No Hit GCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1598 0.5568409901873328 No Hit CCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 975 0.3397496654772525 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCT 813 0.28329895182872433 No Hit CTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGCT 721 0.2512405218554862 Illumina Single End Adapter 1 (95% over 21bp) GGGTAAGGGGTATTAATAAATATTAGCCCACCAACAGCTACCATTACATTT 572 0.19931980374665478 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTC 572 0.19931980374665478 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGC 527 0.18363904995539695 No Hit GAATATGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 516 0.17980597680642285 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCG 510 0.17771520963425513 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCT 440 0.1533229259589652 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTA 422 0.14705062444246209 No Hit TCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 364 0.12683987511150757 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 344 0.11987065120428189 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTT 305 0.10628066458519178 No Hit GCTGACTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 287 0.10000836306868867 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3205842997323818 0.0 2 0.0 0.0 0.0 1.8161797502230153 0.0 3 0.0 0.0 0.0 2.331553858162355 0.0 4 0.0 0.0 0.0 3.111758474576271 0.0 5 0.0 0.0 0.0 6.0579978813559325 0.0 6 0.0 0.0 0.0 7.049369982158787 0.0 7 0.0 0.0 0.0 8.449487065120428 0.0 8 0.0 0.0 0.0 10.390764384478144 0.0 9 0.0 0.0 0.0 11.006843777876895 0.0 10 0.0 0.0 0.0 13.688949598572703 0.0 11 0.0 0.0 0.0 15.445194023193578 0.0 12 0.0 0.0 0.0 18.50572870205174 0.0 13 0.0 0.0 0.0 19.169198818019627 0.0 14 0.0 0.0 0.0 19.467133140053523 0.0 15 0.0 0.0 0.0 20.1009840544157 0.0 16 0.0 0.0 0.0 21.133474576271187 0.0 17 0.0 0.0 0.0 22.193145071364853 0.0 18 0.0 0.0 0.0 23.346551628010705 0.0 19 0.0 0.0 0.0 24.06682091882248 0.0 20 0.0 0.0 0.0 24.735517952720784 0.0 21 0.0 0.0 0.0 25.5265248661909 0.0 22 0.0 0.0 0.0 26.28233719892953 0.0 23 0.0 0.0 0.0 27.095297167707404 0.0 24 0.0 0.0 0.0 27.736465767172167 0.0 25 0.0 0.0 0.0 28.267520628902766 0.0 26 0.0 0.0 0.0 28.766168599464763 0.0 27 0.0 0.0 0.0 29.228925066904548 0.0 28 0.0 0.0 0.0 29.740466101694917 0.0 29 0.0 0.0 0.0 30.26002174397859 0.0 30 0.0 0.0 0.0 30.838467328278323 0.0 31 0.0 0.0 0.0 31.40436830954505 0.0 32 0.0 0.0 0.0 31.9169547279215 0.0 33 0.0 0.0 0.0 32.42501115075825 0.0 34 0.0 0.0 0.0 32.91111451828724 0.0 35 0.0 0.0 0.0 33.44460860838537 0.0 36 0.0 0.0 0.0 33.9132889161463 0.0 37 0.0 0.0 0.0 34.429011485281 0.0 38 0.0 0.0 0.0 34.894904103479035 0.0 39 0.0 0.0 0.0 35.413065900981266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 30 2.1597898E-6 45.000004 1 GCAACGG 45 3.8198777E-10 45.000004 2 CGCATGG 30 2.1597898E-6 45.000004 2 GTCTCGC 30 2.1597898E-6 45.000004 31 TCGATCC 30 2.1597898E-6 45.000004 28 GTTCGCG 30 2.1597898E-6 45.000004 1 CTCGCGC 30 2.1597898E-6 45.000004 33 TACAAAC 30 2.1597898E-6 45.000004 30 TAATACG 55 1.8189894E-12 45.0 4 TCCGCGG 20 7.0244307E-4 45.0 14 GGTCGTT 40 6.7848305E-9 45.0 8 CTCCGCG 20 7.0244307E-4 45.0 13 GGTCGCT 20 7.0244307E-4 45.0 10 TCCGAAA 20 7.0244307E-4 45.0 25 ATAATTC 20 7.0244307E-4 45.0 40 GACGTTT 20 7.0244307E-4 45.0 28 TAGAACG 20 7.0244307E-4 45.0 1 GCTATAC 20 7.0244307E-4 45.0 30 ACTCTAA 35 1.2076634E-7 45.0 27 GATCCGC 20 7.0244307E-4 45.0 17 >>END_MODULE