##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936755.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 453643 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08159720308701 33.0 31.0 34.0 30.0 34.0 2 32.15636083880937 33.0 31.0 34.0 30.0 34.0 3 32.122003425601186 33.0 31.0 34.0 30.0 34.0 4 35.794468337437145 37.0 35.0 37.0 35.0 37.0 5 30.925741166511994 37.0 35.0 37.0 0.0 37.0 6 33.26322901488616 37.0 35.0 37.0 17.0 37.0 7 35.18143562228448 37.0 35.0 37.0 32.0 37.0 8 35.549961092753556 37.0 35.0 37.0 33.0 37.0 9 37.61571103268429 39.0 37.0 39.0 35.0 39.0 10 37.40478305627994 39.0 37.0 39.0 35.0 39.0 11 37.20366235123214 39.0 37.0 39.0 34.0 39.0 12 37.06562429046629 39.0 37.0 39.0 33.0 39.0 13 36.844232138487754 39.0 35.0 39.0 33.0 39.0 14 38.09415774077854 40.0 37.0 41.0 33.0 41.0 15 38.09088644594979 40.0 37.0 41.0 33.0 41.0 16 38.19353764964961 40.0 37.0 41.0 34.0 41.0 17 38.11218954111493 40.0 37.0 41.0 33.0 41.0 18 38.03997196033004 40.0 37.0 41.0 33.0 41.0 19 37.97531979993078 40.0 37.0 41.0 34.0 41.0 20 37.99521429846818 40.0 36.0 41.0 33.0 41.0 21 38.00777263178314 40.0 36.0 41.0 34.0 41.0 22 38.03118972407818 40.0 36.0 41.0 34.0 41.0 23 38.08652178034269 40.0 36.0 41.0 34.0 41.0 24 38.000410014041876 40.0 36.0 41.0 34.0 41.0 25 37.89160859971387 40.0 36.0 41.0 34.0 41.0 26 37.80567979666831 40.0 36.0 41.0 33.0 41.0 27 37.81090416913741 40.0 36.0 41.0 33.0 41.0 28 37.734972213833345 40.0 36.0 41.0 33.0 41.0 29 37.693499073059655 40.0 36.0 41.0 33.0 41.0 30 37.66779163350917 40.0 36.0 41.0 33.0 41.0 31 37.552778286009044 40.0 36.0 41.0 33.0 41.0 32 37.47801024153354 40.0 36.0 41.0 33.0 41.0 33 37.404287071551856 40.0 36.0 41.0 33.0 41.0 34 37.225108730874275 39.0 35.0 41.0 32.0 41.0 35 37.16541862213238 39.0 35.0 41.0 32.0 41.0 36 37.05964602121051 39.0 35.0 41.0 32.0 41.0 37 37.050577216004655 39.0 35.0 41.0 32.0 41.0 38 36.92879643243696 39.0 35.0 41.0 31.0 41.0 39 36.79907107571372 39.0 35.0 41.0 31.0 41.0 40 36.555416924762426 39.0 35.0 41.0 30.0 41.0 41 36.45409275575728 39.0 35.0 41.0 30.0 41.0 42 36.40497704141803 39.0 35.0 41.0 30.0 41.0 43 36.401725585978404 39.0 35.0 40.0 30.0 41.0 44 36.31928190228881 39.0 35.0 40.0 30.0 41.0 45 36.26562076346378 39.0 35.0 40.0 30.0 41.0 46 35.93471518352537 38.0 35.0 40.0 29.0 41.0 47 35.75174972390184 38.0 35.0 40.0 28.0 41.0 48 35.61847091214898 38.0 35.0 40.0 28.0 41.0 49 35.51991984886794 38.0 35.0 40.0 28.0 41.0 50 35.351595858417305 38.0 34.0 40.0 27.0 41.0 51 33.41157694486634 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 32.0 10 31.0 11 32.0 12 15.0 13 8.0 14 16.0 15 19.0 16 28.0 17 65.0 18 160.0 19 224.0 20 357.0 21 614.0 22 823.0 23 1283.0 24 1787.0 25 2460.0 26 3253.0 27 4019.0 28 4863.0 29 6013.0 30 7815.0 31 10509.0 32 14004.0 33 20137.0 34 31810.0 35 40639.0 36 37939.0 37 57132.0 38 87529.0 39 119978.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.57948430814539 20.168282107295827 22.00122122461936 10.251012359939423 2 29.567523360880692 30.596305905745268 23.611518308449597 16.224652424924447 3 31.090968007882854 28.89915638508695 24.779176577176326 15.230699029853872 4 28.30221121013661 24.098465092594836 30.284827496511575 17.31449620075698 5 25.477963949625586 37.41179738252326 19.690814142398317 17.419424525452833 6 24.794827650817933 37.51143520345293 23.54604832434315 14.147688821385978 7 75.62025645717007 6.811523598953362 12.831896447206285 4.7363234966702885 8 74.26302180348866 10.126024208463482 9.654287622646002 5.956666365401868 9 68.60284408664964 7.905776127924382 11.245847505637693 12.245532279788291 10 41.3770299552732 24.09163152523019 19.143467440255886 15.387871079240725 11 33.51115304325207 25.186104491858135 22.809566112559875 18.493176352329915 12 30.48674839025401 21.080673569304498 28.14217347120974 20.29040456923175 13 25.1307746399702 24.546614849121447 31.2197035995265 19.102906911381858 14 20.495411590171127 30.26983773584074 26.198354212453406 23.036396461534732 15 17.932382953115113 25.99775594465251 37.991548420233535 18.07831268199884 16 20.028745070462897 26.06587118064205 30.005312547531872 23.900071201363186 17 19.76444031981095 25.677019153828013 29.623073650425557 24.935466875935482 18 21.26870689066072 26.726963713757296 29.308288676338 22.69604071924399 19 23.64326133104666 28.169728178325247 25.71228917893586 22.47472131169223 20 25.237466465921443 27.188339729699347 29.513075259620454 18.061118544758763 21 23.35625150173154 29.71631877930443 27.12948287530062 19.797946843663407 22 20.231327277176106 25.483254453391762 27.712099602550904 26.573318666881224 23 21.090813701523004 29.596180256280817 27.668012071166093 21.644993971030082 24 23.814761828133577 24.02638197878067 26.592055867719772 25.56680032536598 25 20.138743461268003 31.038283407878005 25.577381332898337 23.24559179795566 26 19.72145497671076 27.528034159019317 28.030191141492317 24.720319722777603 27 22.585381015468112 29.59287369142696 26.185348390694884 21.636396902410045 28 18.395963345626406 28.085961868694103 30.259477165965308 23.25859761971418 29 20.63979825545638 25.662470268471022 29.718743593530593 23.978987882542 30 21.66329029655478 26.43554513130369 30.203265563449673 21.697899008691856 31 24.147843127745826 28.72523107377387 23.972374752834277 23.154551045646027 32 24.514210513553607 29.08520576753086 24.875287395595215 21.52529632332032 33 25.17265779478577 25.57649958227064 24.353731899312898 24.897110723630696 34 25.48567926761793 25.560407633315187 27.577853069484153 21.37606002958273 35 21.096985955916878 25.934490337115307 27.296133743935208 25.672389963032604 36 22.646883121749923 27.94818833311657 26.899345961471905 22.505582583661603 37 21.41617968314291 27.003392535540062 29.679064815284267 21.90136296603276 38 21.970359952649993 29.586480999376164 23.42811417788878 25.015044870085067 39 25.940662591509184 22.955054966129754 26.238694303670506 24.865588138690555 40 25.89326849527051 24.472768234051888 28.986008821915032 20.647954448762572 41 20.931216837909986 26.272200827522962 27.012210041817024 25.784372292750025 42 20.66294420943341 26.684419245970954 29.279852218594797 23.372784326000843 43 22.992529367806842 24.395174178814617 26.744157850997368 25.86813860238117 44 22.619989727605187 24.856770632413593 27.48857581842991 25.034663821551305 45 21.348946197781075 23.74973271934098 26.53606470286106 28.365256380016884 46 25.17067385587345 27.375270862770947 24.98638797468494 22.467667306670663 47 20.34066435501044 24.284514475038744 32.77709564569496 22.597725524255857 48 22.10835392588445 24.885207090156797 27.394008063609494 25.61243092034926 49 20.412967906481526 23.245150922641812 31.85478448912471 24.48709668175195 50 20.524068485571252 23.553763642335493 29.42445932153698 26.497708550556275 51 20.59879685126851 23.44486743981501 25.790324109486974 30.16601159942951 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 156.0 1 343.5 2 531.0 3 853.0 4 1175.0 5 864.0 6 553.0 7 514.5 8 476.0 9 484.0 10 492.0 11 498.0 12 504.0 13 478.5 14 453.0 15 548.0 16 643.0 17 630.0 18 617.0 19 625.5 20 634.0 21 1179.5 22 1725.0 23 1645.5 24 1566.0 25 1996.0 26 3476.5 27 4527.0 28 5394.5 29 6262.0 30 7074.5 31 7887.0 32 8967.5 33 10048.0 34 11056.5 35 12065.0 36 12335.0 37 12605.0 38 14564.0 39 16523.0 40 18876.0 41 21229.0 42 23250.5 43 25272.0 44 30505.0 45 35738.0 46 48875.5 47 62013.0 48 51918.0 49 41823.0 50 40413.5 51 39004.0 52 33624.5 53 28245.0 54 25127.5 55 22010.0 56 20622.5 57 19235.0 58 19072.0 59 18909.0 60 17966.0 61 17023.0 62 15874.5 63 14726.0 64 12224.0 65 9722.0 66 7596.0 67 5470.0 68 4674.5 69 3879.0 70 3253.5 71 2628.0 72 2225.5 73 1823.0 74 1642.0 75 1158.5 76 856.0 77 599.5 78 343.0 79 253.5 80 164.0 81 136.0 82 108.0 83 76.0 84 44.0 85 33.0 86 22.0 87 16.0 88 10.0 89 8.5 90 7.0 91 7.0 92 7.0 93 4.0 94 1.0 95 0.5 96 0.0 97 1.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 453643.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.833905469977495 #Duplication Level Percentage of deduplicated Percentage of total 1 72.32250985411022 20.853404124849302 2 10.558535300832693 6.088876175312605 3 4.062261984664003 3.5139263418025513 4 2.2181338408803075 2.558298459508036 5 1.4869492222291114 2.143727665620538 6 1.0218533691962772 1.7678414070950081 7 0.8044366259861716 1.623653474119104 8 0.5844513088260752 1.348161103239654 9 0.4526755563367383 1.1747163779984686 >10 5.9734883252312425 41.745247647293084 >50 0.4564939710973912 7.956468657328891 >100 0.04672169838412897 2.4538352694251895 >500 0.006127435853656257 1.3301637861351738 >1k 0.0030637179268281287 1.25065872835522 >5k 0.002297788445121097 4.191020781917183 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGC 7258 1.5999365139548059 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCG 6046 1.3327660737628488 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTC 5673 1.2505428277301756 No Hit GCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 1958 0.4316169322573037 TruSeq Adapter, Index 21 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCT 1311 0.2889937682274388 No Hit GAACTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCT 1286 0.28348282680433734 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGC 1108 0.24424492387185517 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTC 986 0.21735152972712024 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCG 978 0.21558802847172778 No Hit GAATATGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTC 894 0.197071265290107 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTT 807 0.17789318913771401 No Hit CCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 653 0.14394578997140925 TruSeq Adapter, Index 21 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGGACTCGTA 644 0.14196185105909273 No Hit CTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGCT 541 0.11925677239591485 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 520 0.11462758160050966 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 454 0.10007869624352188 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16643043097766305 0.0 2 0.0 0.0 0.0 1.1498028185158815 0.0 3 0.0 0.0 0.0 1.4359308972033074 0.0 4 0.0 0.0 0.0 2.1829941165189366 0.0 5 0.0 0.0 0.0 4.9164210623772435 0.0 6 0.0 0.0 0.0 5.7219002607777485 0.0 7 0.0 0.0 0.0 6.823206794770337 0.0 8 0.0 0.0 0.0 8.208437030881111 0.0 9 0.0 0.0 0.0 8.625945953095275 0.0 10 0.0 0.0 0.0 11.20065778596826 0.0 11 0.0 0.0 0.0 12.489115890689375 0.0 12 0.0 0.0 0.0 15.464142508536447 0.0 13 0.0 0.0 0.0 16.003994330343463 0.0 14 0.0 0.0 0.0 16.261024638316915 0.0 15 0.0 0.0 0.0 16.789854577277726 0.0 16 0.0 0.0 0.0 17.542869613330307 0.0 17 0.0 0.0 0.0 18.33534298997229 0.0 18 0.0 0.0 0.0 19.250379703864052 0.0 19 0.0 0.0 0.0 19.788908899729524 0.0 20 0.0 0.0 0.0 20.330083347478084 0.0 21 0.0 0.0 0.0 20.91292051238529 0.0 22 0.0 0.0 0.0 21.583050989434422 0.0 23 0.0 0.0 0.0 22.194324612084834 0.0 24 0.0 0.0 0.0 22.66297507070538 0.0 25 0.0 0.0 0.0 23.115533580370467 0.0 26 0.0 0.0 0.0 23.513203113461465 0.0 27 0.0 0.0 0.0 23.967304686725022 0.0 28 0.0 0.0 0.0 24.35086620977288 0.0 29 0.0 0.0 0.0 24.784026205628656 0.0 30 0.0 0.0 0.0 25.258848918643075 0.0 31 0.0 0.0 0.0 25.732128568059025 0.0 32 0.0 0.0 0.0 26.173444757220988 0.0 33 0.0 0.0 0.0 26.581915735501266 0.0 34 0.0 0.0 0.0 26.97870351796457 0.0 35 0.0 0.0 0.0 27.4380955949943 0.0 36 0.0 0.0 0.0 27.876105219302403 0.0 37 0.0 0.0 0.0 28.349384868718353 0.0 38 0.0 0.0 0.0 28.782324426917203 0.0 39 0.0 0.0 0.0 29.254722325705455 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.028767E-4 45.0 1 CGGGTCA 20 7.028767E-4 45.0 6 TACCCTT 25 3.8870596E-5 45.0 34 ATGATCG 20 7.028767E-4 45.0 27 GATCGAG 20 7.028767E-4 45.0 1 TTTACGA 20 7.028767E-4 45.0 38 GAATGCG 25 3.8870596E-5 45.0 1 GACAAGC 25 3.8870596E-5 45.0 20 GTTAGCG 25 3.8870596E-5 45.0 1 CGTTCCA 25 3.8870596E-5 45.0 23 TGTTGCG 20 7.028767E-4 45.0 26 ACGATAA 20 7.028767E-4 45.0 35 TGCGCGA 25 3.8870596E-5 45.0 27 ATTTTCG 25 3.8870596E-5 45.0 23 GTATGCG 20 7.028767E-4 45.0 1 TTGACGA 20 7.028767E-4 45.0 15 TGCTCGA 20 7.028767E-4 45.0 1 CTCGACT 20 7.028767E-4 45.0 20 TTACGAG 20 7.028767E-4 45.0 1 CACCGTT 20 7.028767E-4 45.0 36 >>END_MODULE