SRR2936754.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936754.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	455156
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGC	13522	2.970849554877888	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTC	12731	2.7970629849985498	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCG	11461	2.5180377716650995	No Hit
GCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC	3430	0.753587780892705	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCT	2768	0.608143142131489	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTC	1930	0.4240304423098894	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGC	1871	0.41106785365896525	No Hit
GAATATGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTC	1808	0.39722644543848706	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCG	1787	0.39261264269832763	No Hit
GAACTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCT	1784	0.39195352802116196	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGATACGTCGTA	1289	0.28319960628883284	No Hit
CTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGCT	718	0.15774811273497438	No Hit
CCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC	701	0.15401312956436913	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTT	596	0.13094411586357205	No Hit
GCTGACTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC	566	0.12435296909191573	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	556	0.1221559201680303	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	495	0.10875392173232913	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTT	481	0.10567805323888954	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGTA	30	2.162602E-6	45.000004	6
CGCATGG	60	0.0	45.000004	2
GCTATGT	30	2.162602E-6	45.000004	10
ATAGCTA	30	2.162602E-6	45.000004	12
CGTTCAT	30	2.162602E-6	45.000004	17
CCGTACA	30	2.162602E-6	45.000004	8
TCATGCG	30	2.162602E-6	45.000004	1
ACCGTAC	30	2.162602E-6	45.000004	7
CGATCCC	30	2.162602E-6	45.000004	43
GTCATCG	20	7.028792E-4	45.0	25
CGAAAAA	25	3.88708E-5	45.0	22
ATTACGG	20	7.028792E-4	45.0	2
ATTACGA	20	7.028792E-4	45.0	36
TAAACGG	20	7.028792E-4	45.0	2
GCGCATG	50	2.1827873E-11	45.0	1
TGCATTA	20	7.028792E-4	45.0	16
CATTACG	20	7.028792E-4	45.0	35
CCCGTTC	20	7.028792E-4	45.0	17
TTCCCGG	25	3.88708E-5	45.0	11
ACGATAA	20	7.028792E-4	45.0	44