SRR2936752.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936752.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	651496
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGC	2143	0.32893525056178397	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTC	2121	0.32555840711224626	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCG	2039	0.3129719906185149	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	1986	0.3048368677628105	No Hit
CCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	1151	0.1766703095644486	No Hit
CTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGCT	1017	0.15610226309908273	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	655	0.10053783906578091	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACCGG	35	1.2108467E-7	45.000004	2
TCCGCCA	20	7.031034E-4	45.0	23
CGTGCCG	20	7.031034E-4	45.0	29
CGGTTAC	20	7.031034E-4	45.0	45
TAGCGCG	20	7.031034E-4	45.0	1
TAGCCGC	25	3.8889382E-5	45.0	43
AATTGCG	20	7.031034E-4	45.0	1
AACGCCG	20	7.031034E-4	45.0	13
GACGGTC	25	3.8889382E-5	45.0	29
CGTACAC	20	7.031034E-4	45.0	11
TGGATCG	20	7.031034E-4	45.0	2
CGGTCAT	25	3.8889382E-5	45.0	31
ATCGGTC	20	7.031034E-4	45.0	19
TATCGTC	20	7.031034E-4	45.0	43
TAACTCG	20	7.031034E-4	45.0	36
TGCGTCC	25	3.8889382E-5	45.0	18
ACGGTCA	25	3.8889382E-5	45.0	30
CGAAAGC	30	2.164048E-6	44.999996	23
TAACGGG	220	0.0	41.93182	3
TTGAGCG	50	1.0804797E-9	40.5	1