SRR2936751.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936751.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	911233
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC	14360	1.5758867380790642	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	13114	1.4391489333683043	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG	12878	1.4132499591213223	No Hit
GCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC	3259	0.35764727572421107	TruSeq Adapter, Index 14 (95% over 21bp)
GAATGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCT	2554	0.28027957723216784	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC	2203	0.24176034011059738	No Hit
GAATATGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC	2180	0.2392362875356797	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG	2173	0.23846809762157428	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTC	1899	0.20839894955516314	No Hit
GAACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCT	1696	0.18612144204610676	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1387	0.15221134440916867	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1344	0.14749246350823556	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTA	1332	0.1461755665126263	No Hit
CCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC	1088	0.1193986609352383	TruSeq Adapter, Index 14 (95% over 21bp)
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	954	0.10469331115093505	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTT	948	0.10403486265313042	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACTA	20	7.032515E-4	45.000004	34
ACCGCGT	20	7.032515E-4	45.000004	21
TACGGGT	70	0.0	45.000004	4
CGCGAAC	25	3.8901664E-5	45.000004	43
GCGATAT	50	2.1827873E-11	45.000004	9
TTGCACG	20	7.032515E-4	45.000004	1
CGCGTAA	25	3.8901664E-5	45.000004	31
TCGAATA	25	3.8901664E-5	45.000004	39
GCGTAAC	25	3.8901664E-5	45.000004	32
TAGTACG	30	2.1650048E-6	45.000004	1
ACGGGTC	75	0.0	45.0	5
TAATACG	405	0.0	43.88889	4
TACGGCT	1985	0.0	43.299747	7
TAGCCGT	85	0.0	42.35294	44
TTAACGG	60	3.6379788E-12	41.250004	2
ACGGCTG	2095	0.0	41.026253	8
TCGGGTA	55	6.002665E-11	40.909092	5
TCGGCAT	50	1.0804797E-9	40.500004	32
TAACGGG	235	0.0	40.212765	3
TCGTTTA	45	1.927583E-8	40.000004	38