##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936751.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 911233 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93312248349215 33.0 31.0 34.0 30.0 34.0 2 32.01227786965573 33.0 31.0 34.0 30.0 34.0 3 31.97220469407934 33.0 31.0 34.0 30.0 34.0 4 35.68303715954097 37.0 35.0 37.0 33.0 37.0 5 31.01755313953731 37.0 35.0 37.0 0.0 37.0 6 33.24541363185925 37.0 35.0 37.0 17.0 37.0 7 35.1087230159575 37.0 35.0 37.0 32.0 37.0 8 35.46824467507213 37.0 35.0 37.0 33.0 37.0 9 37.502775909125326 39.0 37.0 39.0 35.0 39.0 10 37.29942835696249 39.0 37.0 39.0 34.0 39.0 11 37.029213165019264 39.0 37.0 39.0 33.0 39.0 12 36.79471660925361 39.0 35.0 39.0 33.0 39.0 13 36.51160570348089 39.0 35.0 39.0 32.0 39.0 14 37.41024194690052 40.0 36.0 41.0 32.0 41.0 15 37.49536287645421 40.0 36.0 41.0 32.0 41.0 16 37.673590618425806 40.0 36.0 41.0 33.0 41.0 17 37.65098608149617 40.0 36.0 41.0 33.0 41.0 18 37.570692676845546 39.0 36.0 41.0 33.0 41.0 19 37.52020284603389 39.0 36.0 41.0 33.0 41.0 20 37.481598010607605 39.0 35.0 41.0 32.0 41.0 21 37.47711507375172 39.0 35.0 41.0 33.0 41.0 22 37.56675954448533 39.0 35.0 41.0 33.0 41.0 23 37.62028153062938 39.0 35.0 41.0 33.0 41.0 24 37.52659528353341 39.0 35.0 41.0 33.0 41.0 25 37.412361053649285 39.0 35.0 41.0 33.0 41.0 26 37.32101778579134 39.0 35.0 41.0 33.0 41.0 27 37.30482105015951 39.0 35.0 41.0 33.0 41.0 28 37.26498052638568 39.0 35.0 41.0 32.0 41.0 29 37.161491078571565 39.0 35.0 41.0 32.0 41.0 30 37.09086260045455 39.0 35.0 41.0 32.0 41.0 31 36.978533481557406 39.0 35.0 41.0 31.0 41.0 32 36.782991836336045 39.0 35.0 41.0 31.0 41.0 33 36.74893688002959 39.0 35.0 41.0 31.0 41.0 34 36.486372859630855 39.0 35.0 41.0 30.0 41.0 35 36.42421312660977 39.0 35.0 41.0 30.0 41.0 36 36.28868357489248 39.0 35.0 40.0 30.0 41.0 37 36.16684536227287 38.0 35.0 40.0 30.0 41.0 38 36.01577423117907 38.0 35.0 40.0 29.0 41.0 39 35.59694721328135 38.0 34.0 40.0 27.0 41.0 40 35.427973964946396 38.0 34.0 40.0 26.0 41.0 41 35.193561910071296 38.0 34.0 40.0 25.0 41.0 42 35.28881855683453 38.0 34.0 40.0 26.0 41.0 43 35.25599489921897 38.0 34.0 40.0 26.0 41.0 44 35.1211885434351 38.0 34.0 40.0 26.0 41.0 45 35.101317665185526 38.0 34.0 40.0 26.0 41.0 46 34.835537123875014 37.0 34.0 40.0 24.0 41.0 47 34.62337404374073 37.0 34.0 40.0 23.0 41.0 48 34.476466501981385 37.0 33.0 40.0 23.0 41.0 49 34.372235202193075 37.0 33.0 40.0 23.0 41.0 50 34.17988703218606 37.0 33.0 40.0 23.0 41.0 51 32.128729973563296 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 29.0 9 47.0 10 80.0 11 39.0 12 33.0 13 18.0 14 24.0 15 67.0 16 120.0 17 233.0 18 416.0 19 744.0 20 1249.0 21 1774.0 22 2730.0 23 3910.0 24 5512.0 25 7636.0 26 10201.0 27 12483.0 28 14953.0 29 17550.0 30 21803.0 31 26843.0 32 35314.0 33 48919.0 34 72465.0 35 76968.0 36 77590.0 37 112930.0 38 161103.0 39 197417.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.228645143448496 19.61375411118781 22.45276455088874 10.704836194474959 2 29.846263249904247 30.146076799237953 23.316868462841008 16.69079148801679 3 31.069111851743735 29.33508773277526 24.414831332930216 15.180969082550785 4 28.37342370173161 23.004654133465316 30.88441704810954 17.737505116693537 5 25.246781009906353 36.4613660830984 20.736079575695786 17.55577333129946 6 25.55065499164319 36.08813552625947 24.930067282462335 13.431142199635 7 76.12641333226519 5.618431290350547 13.506863776882533 4.748291600501737 8 74.91519732055359 9.454332755727679 10.200135420907715 5.430334502811027 9 69.12776424909984 6.4272255284872255 11.504302412226073 12.940707810186858 10 45.44765169830329 19.384175068286595 19.47130975282941 15.696863480580708 11 34.115204344004226 22.786268715026782 23.870404166662095 19.2281227743069 12 31.900293338805774 18.84501549000091 28.388348534348513 20.866342636844802 13 25.974695824229364 20.984534142200733 34.43433238260686 18.606437650963038 14 21.875085735481484 25.48634652169094 30.907243262700103 21.731324480127476 15 18.737249419193557 22.89546142424605 39.81177152276092 18.55551763379948 16 24.133893307200243 24.614999676262823 27.791574712504925 23.45953230403201 17 24.718156607585545 22.727666798722172 28.915546298257418 23.63863029543487 18 24.821533021740873 24.666907366173085 29.482580196283497 21.028979415802546 19 24.683588061450802 26.65531208812675 25.90972890577931 22.75137094464314 20 24.06047629969503 28.677297683468446 29.069294022494795 18.192931994341734 21 23.048989665650826 27.861699477521118 30.941482584585938 18.147828272242116 22 21.484406293450743 22.013030695771555 30.855006348540932 25.64755666223677 23 20.909909979116208 26.996717634238443 31.040798566338136 21.05257382030721 24 23.831336222459022 24.174936596896732 26.944041754414073 25.049685426230173 25 22.814472259016082 29.470837864739313 24.92106848632567 22.793621389918933 26 20.33738901027509 23.995509381244972 26.9900234078441 28.67707820063584 27 22.320855368495216 25.778917137548795 26.663871918598208 25.236355575357784 28 18.43348517887302 24.429646424130823 29.274181246728332 27.862687150267824 29 22.964269292266632 23.657286336206 25.94561434890966 27.432830022617704 30 22.981388953209553 23.769112839416483 27.956625802621282 25.292872404752682 31 23.936578240691457 22.381652113125842 26.10155690147306 27.58021274470964 32 26.009703336029315 23.893120639836354 27.02294583273433 23.074230191400005 33 23.665297459595955 22.10246995005668 27.061574811272198 27.170657779075164 34 24.722656005653878 21.539057518768526 29.326418160887503 24.411868314690096 35 20.34024228709891 23.538985089433766 29.311712811103195 26.80905981236413 36 23.47994420746395 25.73589850235889 24.763260329685163 26.02089696049199 37 20.906727478043486 24.77884361079987 30.30179986896875 24.012629042187893 38 22.051549932893124 24.12357761406797 27.655166132043068 26.16970632099584 39 25.066256380091588 22.190263083097296 29.19560639265698 23.54787414415413 40 24.20862721170107 20.43110817979595 33.682054973865085 21.678209634637902 41 22.417537556256192 25.28025214187809 26.404113986214284 25.89809631565143 42 19.894033688419977 22.221319903910416 34.11553356825313 23.769112839416483 43 22.184227305200753 24.09372794883416 28.234161844445932 25.48788290151915 44 22.735787663528427 21.533350965120885 29.035713149106762 26.695148222243926 45 20.57377202098695 20.323232367572288 28.13583353544044 30.96716207600032 46 25.00556937687726 23.38413995103338 26.867222763003536 24.743067909085823 47 18.801448147729506 22.372214351323976 34.746656453398856 24.079681047547663 48 20.944698008083552 24.988449715934344 27.690502868091915 26.37634940789019 49 22.01533526551387 20.67089317441313 32.74233922608158 24.571432333991417 50 21.896485311660136 21.42404851448532 29.64675335506945 27.0327128187851 51 20.609108757035795 22.017420352423585 26.408942608531515 30.964528282009102 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 242.0 1 582.5 2 923.0 3 1866.0 4 2809.0 5 1971.5 6 1134.0 7 1045.5 8 957.0 9 970.5 10 984.0 11 995.0 12 1006.0 13 1081.0 14 1156.0 15 1094.0 16 1032.0 17 1123.0 18 1214.0 19 1342.0 20 1470.0 21 1778.0 22 2086.0 23 2516.0 24 2946.0 25 3485.0 26 4984.5 27 5945.0 28 7252.0 29 8559.0 30 10090.5 31 11622.0 32 13341.0 33 15060.0 34 17387.0 35 19714.0 36 21681.5 37 23649.0 38 25981.5 39 28314.0 40 31918.0 41 35522.0 42 39509.5 43 43497.0 44 53881.0 45 64265.0 46 92205.5 47 120146.0 48 102426.5 49 84707.0 50 83847.0 51 82987.0 52 73119.0 53 63251.0 54 57410.5 55 51570.0 56 49492.0 57 47414.0 58 46172.5 59 44931.0 60 40860.5 61 36790.0 62 33091.0 63 29392.0 64 25761.5 65 22131.0 66 18844.0 67 15557.0 68 13598.5 69 11640.0 70 10158.0 71 8676.0 72 7137.0 73 5598.0 74 4721.0 75 2963.0 76 2082.0 77 1592.5 78 1103.0 79 832.0 80 561.0 81 494.0 82 427.0 83 287.0 84 147.0 85 110.5 86 74.0 87 53.0 88 32.0 89 27.0 90 22.0 91 12.5 92 3.0 93 4.0 94 5.0 95 8.0 96 11.0 97 6.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 911233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.954052034968004 #Duplication Level Percentage of deduplicated Percentage of total 1 73.53794202512927 22.027593419651822 2 10.199659225872141 6.110422463814312 3 3.9389650274739214 3.5396389019061907 4 2.1904601201777347 2.6245262568130454 5 1.4226276996204397 2.130673207040874 6 0.9943641364697522 1.787114105131259 7 0.7515455574394403 1.575828431393302 8 0.5495069836578017 1.3167968625651283 9 0.45499110431226525 1.2265944492615433 >10 5.4907778105968585 40.455279842438216 >50 0.41711459503279885 7.397753150132577 >100 0.04493155184250297 2.458814333718485 >500 0.0018721479934376193 0.4550202869997665 >1k 0.0041187255855627625 2.368191609563734 >5k 0.0 0.0 >10k+ 0.0011232887960625716 4.5257526795697745 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC 14360 1.5758867380790642 No Hit GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 13114 1.4391489333683043 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG 12878 1.4132499591213223 No Hit GCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 3259 0.35764727572421107 TruSeq Adapter, Index 14 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCT 2554 0.28027957723216784 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGC 2203 0.24176034011059738 No Hit GAATATGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTC 2180 0.2392362875356797 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCG 2173 0.23846809762157428 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTC 1899 0.20839894955516314 No Hit GAACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCT 1696 0.18612144204610676 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1387 0.15221134440916867 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1344 0.14749246350823556 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTA 1332 0.1461755665126263 No Hit CCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 1088 0.1193986609352383 TruSeq Adapter, Index 14 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 954 0.10469331115093505 No Hit GAATCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTT 948 0.10403486265313042 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.19482832601541E-4 0.0 0.0 0.13772547745746697 0.0 2 2.19482832601541E-4 0.0 0.0 1.0249848282491965 0.0 3 2.19482832601541E-4 0.0 0.0 1.3091053550518912 0.0 4 2.19482832601541E-4 0.0 0.0 1.8919420170252834 0.0 5 2.19482832601541E-4 0.0 0.0 4.796138858008874 0.0 6 2.19482832601541E-4 0.0 0.0 5.669680531763007 0.0 7 2.19482832601541E-4 0.0 0.0 6.876616628238881 0.0 8 2.19482832601541E-4 0.0 0.0 8.37908635881273 0.0 9 2.19482832601541E-4 0.0 0.0 8.875227301908513 0.0 10 2.19482832601541E-4 0.0 0.0 11.69624014933612 0.0 11 2.19482832601541E-4 0.0 0.0 13.006333177134717 0.0 12 2.19482832601541E-4 0.0 0.0 16.08732343977885 0.0 13 2.19482832601541E-4 0.0 0.0 16.6073880116282 0.0 14 2.19482832601541E-4 0.0 0.0 16.85672050946355 0.0 15 2.19482832601541E-4 0.0 0.0 17.380516289467128 0.0 16 2.19482832601541E-4 0.0 0.0 18.070680056582674 0.0 17 2.19482832601541E-4 0.0 0.0 18.777305036143336 0.0 18 2.19482832601541E-4 0.0 0.0 19.549555382651857 0.0 19 2.19482832601541E-4 0.0 0.0 20.052061327893085 0.0 20 2.19482832601541E-4 0.0 0.0 20.57256486540764 0.0 21 2.19482832601541E-4 0.0 0.0 21.16900946300233 0.0 22 2.19482832601541E-4 0.0 0.0 21.80869217861952 0.0 23 2.19482832601541E-4 0.0 0.0 22.39580875582864 0.0 24 2.19482832601541E-4 0.0 0.0 22.862429257939517 0.0 25 2.19482832601541E-4 0.0 0.0 23.283397330869274 0.0 26 2.19482832601541E-4 0.0 0.0 23.68735548427241 0.0 27 3.292242489023115E-4 0.0 0.0 24.25043869131166 0.0 28 3.292242489023115E-4 0.0 0.0 24.678100990635766 0.0 29 3.292242489023115E-4 0.0 0.0 25.171937363989233 0.0 30 3.292242489023115E-4 0.0 0.0 25.768162478751318 0.0 31 3.292242489023115E-4 0.0 0.0 26.227979013051545 0.0 32 4.38965665203082E-4 0.0 0.0 26.653336742633332 0.0 33 4.38965665203082E-4 0.0 0.0 27.088680941098488 0.0 34 4.38965665203082E-4 0.0 0.0 27.56858015458176 0.0 35 4.38965665203082E-4 0.0 0.0 28.083267397032373 0.0 36 5.487070815038524E-4 0.0 0.0 28.5433034141652 0.0 37 5.487070815038524E-4 0.0 0.0 29.046358066487933 0.0 38 5.487070815038524E-4 0.0 0.0 29.627987572882017 0.0 39 5.487070815038524E-4 0.0 0.0 30.74350906957935 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 20 7.032515E-4 45.000004 34 ACCGCGT 20 7.032515E-4 45.000004 21 TACGGGT 70 0.0 45.000004 4 CGCGAAC 25 3.8901664E-5 45.000004 43 GCGATAT 50 2.1827873E-11 45.000004 9 TTGCACG 20 7.032515E-4 45.000004 1 CGCGTAA 25 3.8901664E-5 45.000004 31 TCGAATA 25 3.8901664E-5 45.000004 39 GCGTAAC 25 3.8901664E-5 45.000004 32 TAGTACG 30 2.1650048E-6 45.000004 1 ACGGGTC 75 0.0 45.0 5 TAATACG 405 0.0 43.88889 4 TACGGCT 1985 0.0 43.299747 7 TAGCCGT 85 0.0 42.35294 44 TTAACGG 60 3.6379788E-12 41.250004 2 ACGGCTG 2095 0.0 41.026253 8 TCGGGTA 55 6.002665E-11 40.909092 5 TCGGCAT 50 1.0804797E-9 40.500004 32 TAACGGG 235 0.0 40.212765 3 TCGTTTA 45 1.927583E-8 40.000004 38 >>END_MODULE