##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936749.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 747274 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05295380275508 33.0 31.0 34.0 30.0 34.0 2 32.15022869790733 33.0 31.0 34.0 30.0 34.0 3 32.06646959482064 33.0 31.0 34.0 30.0 34.0 4 35.77456461752985 37.0 35.0 37.0 35.0 37.0 5 30.9445852525312 37.0 35.0 37.0 0.0 37.0 6 33.301252284971774 37.0 35.0 37.0 17.0 37.0 7 35.31846417779824 37.0 35.0 37.0 32.0 37.0 8 35.770298444747176 37.0 35.0 37.0 35.0 37.0 9 37.783360587950334 39.0 37.0 39.0 35.0 39.0 10 37.45657817614423 39.0 37.0 39.0 35.0 39.0 11 37.251836675703956 39.0 37.0 39.0 34.0 39.0 12 37.12382606647628 39.0 37.0 39.0 34.0 39.0 13 36.974465858573964 39.0 37.0 39.0 33.0 39.0 14 37.99734100209562 40.0 37.0 41.0 33.0 41.0 15 38.13339417670092 40.0 37.0 41.0 33.0 41.0 16 38.1824444581238 40.0 37.0 41.0 33.0 41.0 17 38.20501583087328 40.0 37.0 41.0 33.0 41.0 18 38.15022334511839 40.0 37.0 41.0 33.0 41.0 19 38.09974922183831 40.0 37.0 41.0 34.0 41.0 20 38.06766059035909 40.0 37.0 41.0 33.0 41.0 21 38.00382055310368 40.0 37.0 41.0 33.0 41.0 22 38.05451414073018 40.0 36.0 41.0 34.0 41.0 23 38.05539065991859 40.0 36.0 41.0 34.0 41.0 24 38.01831456734745 40.0 36.0 41.0 34.0 41.0 25 37.86604244226348 40.0 36.0 41.0 33.0 41.0 26 37.793142809732444 40.0 36.0 41.0 33.0 41.0 27 37.76500721288309 40.0 36.0 41.0 33.0 41.0 28 37.72417881526722 40.0 36.0 41.0 33.0 41.0 29 37.68960782791854 40.0 36.0 41.0 33.0 41.0 30 37.598314674403234 40.0 36.0 41.0 33.0 41.0 31 37.474057708417526 40.0 36.0 41.0 33.0 41.0 32 37.40520210792828 40.0 35.0 41.0 33.0 41.0 33 37.298035258820725 40.0 35.0 41.0 32.0 41.0 34 37.16806017605323 40.0 35.0 41.0 32.0 41.0 35 37.06552750396776 39.0 35.0 41.0 31.0 41.0 36 36.91105939722244 39.0 35.0 41.0 31.0 41.0 37 36.88835420474953 39.0 35.0 41.0 31.0 41.0 38 36.799139271538955 39.0 35.0 41.0 31.0 41.0 39 36.641923845871794 39.0 35.0 41.0 30.0 41.0 40 36.54055406718285 39.0 35.0 41.0 30.0 41.0 41 36.46391818797389 39.0 35.0 41.0 30.0 41.0 42 36.43115242869416 39.0 35.0 41.0 30.0 41.0 43 36.365564705850865 39.0 35.0 41.0 30.0 41.0 44 36.230195350032254 39.0 35.0 41.0 30.0 41.0 45 36.182903459775126 39.0 35.0 40.0 30.0 41.0 46 36.05740598495331 38.0 35.0 40.0 29.0 41.0 47 35.948652033925974 38.0 35.0 40.0 29.0 41.0 48 35.827800779901345 38.0 35.0 40.0 28.0 41.0 49 35.73117089581599 38.0 35.0 40.0 28.0 41.0 50 35.55042862457412 38.0 34.0 40.0 28.0 41.0 51 33.74936368721513 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 32.0 9 39.0 10 45.0 11 30.0 12 25.0 13 27.0 14 19.0 15 35.0 16 51.0 17 117.0 18 196.0 19 374.0 20 647.0 21 1108.0 22 1569.0 23 2287.0 24 3339.0 25 4808.0 26 6145.0 27 7672.0 28 8652.0 29 10254.0 30 12757.0 31 16454.0 32 21967.0 33 32112.0 34 50029.0 35 58258.0 36 61452.0 37 94251.0 38 145322.0 39 207139.0 40 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.34410403680578 22.48211499396473 27.12860343060243 10.045177538627064 2 30.55438835019016 25.705296852292463 27.406145536978403 16.33416926053897 3 31.505578944269434 24.875882206526654 27.768529348003547 15.850009501200363 4 27.578639160468583 26.417083961170867 27.47840818762596 18.52586869073459 5 22.347090893032544 39.5042514526131 22.334779478477774 15.813878175876587 6 26.56321509914703 34.515452163463465 24.479508185752483 14.441824551637017 7 82.59661114932408 4.919480672417347 8.167017720407776 4.316890457850802 8 84.26280052564388 4.5342136886871485 7.007335997237961 4.195649788431018 9 78.08782320808699 7.0386498125185675 9.019181719155222 5.854345260239216 10 40.98978420231401 31.279022152517015 15.453769300149611 12.277424345019364 11 29.390290576147436 24.485530073306442 26.877691449187314 19.246487901358805 12 28.37861346708169 22.086543891531086 29.798306912859275 19.736535728527958 13 26.11237645094035 22.97871998758153 32.344896249568436 18.564007311909688 14 21.31708048185806 27.126596134751107 30.99666253609787 20.55966084729296 15 19.537278160353498 25.840722412394918 35.18776245393256 19.434236973319024 16 24.499848783712533 26.352315215034917 29.039549081059956 20.108286920192594 17 25.19651426384432 25.079957284744285 27.30016031602866 22.423368135382738 18 25.439530881577575 25.78732834274978 29.176179018673203 19.59696175699944 19 25.226757521337557 27.00722894145922 26.912618397000298 20.853395140202924 20 23.898730586103625 29.093746069045622 27.804794493050743 19.202728851800007 21 24.02478876556658 26.726207522274294 30.38216236614682 18.866841346012304 22 23.48295270543335 23.78123686893964 29.907503807171132 22.828306618455883 23 21.807797407644316 25.947376731961768 30.28126229468709 21.963563565706824 24 22.497905721328454 26.21849549161352 29.10405018774907 22.179548599308955 25 22.90123836772054 27.41604819651159 26.72339730808244 22.95931612768543 26 20.67942949975511 27.98103506879672 27.080160690723886 24.259374740724287 27 21.877383663823444 26.401694692977408 28.949220767750518 22.77170087544863 28 18.97242510779179 27.146401453817475 29.127334819624394 24.753838618766345 29 21.687493476288484 27.33067121296874 27.51882174409922 23.46301356664356 30 25.1907600157372 25.81342318881695 27.4999531630968 21.495863632349042 31 23.819375490114737 26.158811894967577 26.743871725765917 23.277940889151772 32 25.835637262904903 26.721390012231122 25.6054673386201 21.83750538624387 33 24.686928757055647 25.529859194887017 26.84932166782198 22.93389038023536 34 21.727773213038322 25.343314500437593 28.44699534575002 24.481916940774067 35 22.252747988020456 26.85413917786515 28.386241191316707 22.506871642797687 36 24.18952084509832 27.605938384046546 26.949017361770917 21.25552340908422 37 22.71228491824953 26.995854264968404 27.59255641170441 22.699304405077655 38 22.504730527222947 26.58783792825657 27.582386112724382 23.325045431796102 39 22.536981080567504 25.383728056910854 27.78338333730332 24.295907525218325 40 23.900737881954946 24.14950874779532 29.433246707365708 22.516506662884026 41 21.075937340252704 25.033923299887324 28.251217090384518 25.638922269475454 42 21.453175140577617 26.10086795472611 29.410229714937223 23.035727189759044 43 22.785484306961035 24.891003835273274 28.5982116332162 23.725300224549496 44 22.249402494934923 24.283328471216716 28.56087593038163 24.906393103466733 45 22.412796377232446 23.719679796165796 27.565524827573284 26.30199899902847 46 23.242612482168525 24.732293643295495 27.796899129368878 24.2281947451671 47 20.530488147587096 24.778327628152457 30.853876891207243 23.837307333053204 48 21.124781539301516 25.7011484408664 29.07113053578741 24.102939484044676 49 23.115349925194774 23.380312977569137 30.214887711870077 23.28944938536601 50 21.652031249581814 23.580641103530965 29.097894480471687 25.669433166415534 51 20.483249785219343 24.0518203496977 27.928310097768687 27.536619767314264 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 150.0 1 380.5 2 611.0 3 1882.5 4 3154.0 5 2151.5 6 1149.0 7 1083.0 8 1017.0 9 1012.5 10 1008.0 11 954.0 12 900.0 13 907.0 14 914.0 15 962.5 16 1011.0 17 1119.0 18 1227.0 19 1310.0 20 1393.0 21 1534.5 22 1676.0 23 2223.0 24 2770.0 25 3306.5 26 4924.0 27 6005.0 28 7278.5 29 8552.0 30 9908.5 31 11265.0 32 13402.0 33 15539.0 34 18920.0 35 22301.0 36 24054.0 37 25807.0 38 28518.5 39 31230.0 40 33552.5 41 35875.0 42 40945.0 43 46015.0 44 49961.5 45 53908.0 46 61989.5 47 70071.0 48 73120.5 49 76170.0 50 73467.0 51 70764.0 52 62071.0 53 53378.0 54 47906.0 55 42434.0 56 39850.5 57 37267.0 58 34368.0 59 31469.0 60 28021.5 61 24574.0 62 21776.0 63 18978.0 64 17286.0 65 15594.0 66 13174.0 67 10754.0 68 8557.5 69 6361.0 70 5577.5 71 4794.0 72 3936.5 73 3079.0 74 2489.5 75 1597.5 76 1295.0 77 929.0 78 563.0 79 404.5 80 246.0 81 182.0 82 118.0 83 85.5 84 53.0 85 51.0 86 49.0 87 35.5 88 22.0 89 16.0 90 10.0 91 6.0 92 2.0 93 2.0 94 2.0 95 3.0 96 4.0 97 3.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 747274.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.35508663585438 #Duplication Level Percentage of deduplicated Percentage of total 1 73.24207360713928 25.16237784162893 2 10.077031585740613 6.923945863207194 3 3.890998798900381 4.0102680250868366 4 2.162144408082123 2.971226338355576 5 1.4279797627965096 2.452918423256043 6 1.0280037418522425 2.1190294567989763 7 0.7857426911835894 1.889598076037111 8 0.6548488004704939 1.7997909818839304 9 0.5310455124816635 1.6419703130000314 >10 6.0070137783871065 44.26491812761172 >50 0.15553340559083678 3.2793692277431106 >100 0.033985448158385584 2.018252979027333 >500 0.001599315207453439 0.387771602790047 >1k 0.001999144009316799 1.0785627435733085 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC 1752 0.23445215543428516 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 1650 0.2208025436453028 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1649 0.22066872392188142 No Hit GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 1450 0.19403859896102366 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 1351 0.1807904463423055 No Hit CTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGCT 867 0.11602170020635 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 781 0.10451320399210999 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3381972342139562E-4 0.0 0.0 0.1469340563166924 0.0 2 1.3381972342139562E-4 0.0 0.0 0.6913126911949299 0.0 3 1.3381972342139562E-4 0.0 0.0 0.9817014910193583 0.0 4 1.3381972342139562E-4 0.0 0.0 1.3889149093906652 0.0 5 1.3381972342139562E-4 0.0 0.0 2.646820309551784 0.0 6 1.3381972342139562E-4 0.0 0.0 3.479178989232865 0.0 7 1.3381972342139562E-4 0.0 0.0 4.317559556467908 0.0 8 1.3381972342139562E-4 0.0 0.0 5.628725206550743 0.0 9 1.3381972342139562E-4 0.0 0.0 6.149283930659972 0.0 10 1.3381972342139562E-4 0.0 0.0 7.359817148729917 0.0 11 1.3381972342139562E-4 0.0 0.0 8.714474208924704 0.0 12 1.3381972342139562E-4 0.0 0.0 10.081175044227418 0.0 13 1.3381972342139562E-4 0.0 0.0 10.558911456841802 0.0 14 1.3381972342139562E-4 0.0 0.0 10.78894756140318 0.0 15 1.3381972342139562E-4 0.0 0.0 11.1418301720654 0.0 16 1.3381972342139562E-4 0.0 0.0 11.768775576294638 0.0 17 1.3381972342139562E-4 0.0 0.0 12.569820440695112 0.0 18 2.6763944684279125E-4 0.0 0.0 13.428943065060473 0.0 19 4.014591702641869E-4 0.0 0.0 13.969039468789227 0.0 20 4.014591702641869E-4 0.0 0.0 14.51890471232774 0.0 21 4.014591702641869E-4 0.0 0.0 15.182382901051021 0.0 22 4.014591702641869E-4 0.0 0.0 15.924680906869503 0.0 23 4.014591702641869E-4 0.0 0.0 16.62549479842735 0.0 24 4.014591702641869E-4 0.0 0.0 17.164788283815575 0.0 25 4.014591702641869E-4 0.0 0.0 17.663802032453958 0.0 26 4.014591702641869E-4 0.0 0.0 18.12989612913068 0.0 27 4.014591702641869E-4 0.0 0.0 18.67066163147654 0.0 28 4.014591702641869E-4 0.0 0.0 19.167534264540183 0.0 29 4.014591702641869E-4 0.0 0.0 19.69183994090521 0.0 30 4.014591702641869E-4 0.0 0.0 20.291753761003328 0.0 31 4.014591702641869E-4 0.0 0.0 20.833456001413136 0.0 32 4.014591702641869E-4 0.0 0.0 21.308649839282513 0.0 33 4.014591702641869E-4 0.0 0.0 21.8177000671775 0.0 34 4.014591702641869E-4 0.0 0.0 22.350837845288343 0.0 35 4.014591702641869E-4 0.0 0.0 22.921311326233752 0.0 36 4.014591702641869E-4 0.0 0.0 23.446152281492466 0.0 37 4.014591702641869E-4 0.0 0.0 23.979423879326728 0.0 38 4.014591702641869E-4 0.0 0.0 24.575323107722202 0.0 39 4.014591702641869E-4 0.0 0.0 25.499348297946938 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTACG 35 1.2111559E-7 45.000004 1 CGTGCTT 20 7.0317E-4 45.0 19 AACGATC 25 3.889492E-5 45.0 42 TTACGCG 25 3.889492E-5 45.0 1 ACTCACG 25 3.889492E-5 45.0 1 TAACGCG 30 2.1644792E-6 44.999996 1 CGTTTTT 730 0.0 42.22603 1 TCTACGG 60 3.6379788E-12 41.249996 2 CTACGAA 60 3.6379788E-12 41.249996 11 TACTACG 55 6.002665E-11 40.909092 1 TATAGCG 45 1.9266736E-8 40.0 1 TGCTACG 80 0.0 39.375 1 TCGACTG 40 3.4560617E-7 39.375 1 AAGTGCG 40 3.4560617E-7 39.375 1 TACGGGT 75 0.0 39.0 4 CGACAGG 75 0.0 39.0 2 GCGATCA 75 0.0 39.0 9 TAACGCC 35 6.2453546E-6 38.57143 12 GGAACGC 70 0.0 38.57143 8 CCACGTC 35 6.2453546E-6 38.57143 33 >>END_MODULE