##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936748.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 357047 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94344722123418 33.0 31.0 34.0 30.0 34.0 2 32.046360843250326 33.0 31.0 34.0 30.0 34.0 3 32.00396026293457 33.0 31.0 34.0 30.0 34.0 4 35.69087263021395 37.0 35.0 37.0 33.0 37.0 5 30.77688091483754 37.0 35.0 37.0 0.0 37.0 6 33.190451117079824 37.0 35.0 37.0 17.0 37.0 7 35.215103333734774 37.0 35.0 37.0 32.0 37.0 8 35.68435248020569 37.0 35.0 37.0 35.0 37.0 9 37.66121266948049 39.0 37.0 39.0 35.0 39.0 10 37.31798614748198 39.0 37.0 39.0 34.0 39.0 11 37.14847625102578 39.0 37.0 39.0 34.0 39.0 12 36.97773122306027 39.0 35.0 39.0 33.0 39.0 13 36.75500144238713 39.0 35.0 39.0 33.0 39.0 14 37.896806302811676 40.0 37.0 41.0 33.0 41.0 15 38.05745462082023 40.0 37.0 41.0 33.0 41.0 16 38.044246275700395 40.0 36.0 41.0 33.0 41.0 17 38.049116782944544 40.0 36.0 41.0 34.0 41.0 18 38.01358644660227 40.0 36.0 41.0 34.0 41.0 19 37.99438449279787 40.0 36.0 41.0 34.0 41.0 20 37.99067349676653 40.0 36.0 41.0 34.0 41.0 21 37.87822891664123 40.0 36.0 41.0 33.0 41.0 22 37.85989239511885 40.0 36.0 41.0 33.0 41.0 23 37.87432746949281 40.0 36.0 41.0 34.0 41.0 24 37.82839514125591 40.0 36.0 41.0 33.0 41.0 25 37.65535349687856 39.0 35.0 41.0 33.0 41.0 26 37.63588267090887 39.0 35.0 41.0 33.0 41.0 27 37.55774729937515 39.0 35.0 41.0 33.0 41.0 28 37.53382327816786 39.0 36.0 41.0 33.0 41.0 29 37.5567502317622 40.0 36.0 41.0 33.0 41.0 30 37.486515780835575 39.0 36.0 41.0 33.0 41.0 31 37.415844412640354 39.0 35.0 41.0 33.0 41.0 32 37.35396180334802 39.0 35.0 41.0 33.0 41.0 33 37.264418970051565 39.0 35.0 41.0 32.0 41.0 34 37.20909852204332 39.0 35.0 41.0 32.0 41.0 35 37.17154044145449 39.0 35.0 41.0 32.0 41.0 36 37.02832400216218 39.0 35.0 41.0 32.0 41.0 37 36.950771186986586 39.0 35.0 41.0 31.0 41.0 38 36.915439704016556 39.0 35.0 41.0 31.0 41.0 39 36.83013720882685 39.0 35.0 41.0 31.0 41.0 40 36.740838040930186 39.0 35.0 41.0 31.0 41.0 41 36.706414001518006 39.0 35.0 41.0 31.0 41.0 42 36.654376034527665 39.0 35.0 41.0 31.0 41.0 43 36.55818981814719 39.0 35.0 41.0 31.0 41.0 44 36.42734149845818 39.0 35.0 40.0 30.0 41.0 45 36.35401221687901 39.0 35.0 40.0 30.0 41.0 46 36.14894677731503 38.0 35.0 40.0 30.0 41.0 47 36.084817965141845 38.0 35.0 40.0 30.0 41.0 48 36.00104468039222 38.0 35.0 40.0 29.0 41.0 49 35.90708226087882 38.0 35.0 40.0 29.0 41.0 50 35.69985464098564 38.0 35.0 40.0 28.0 41.0 51 33.81222640156618 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 17.0 9 27.0 10 23.0 11 19.0 12 11.0 13 6.0 14 2.0 15 11.0 16 18.0 17 23.0 18 72.0 19 139.0 20 254.0 21 402.0 22 639.0 23 975.0 24 1358.0 25 1804.0 26 2397.0 27 3033.0 28 3775.0 29 4978.0 30 6127.0 31 8250.0 32 10820.0 33 16518.0 34 25802.0 35 34071.0 36 29779.0 37 44539.0 38 69032.0 39 92102.0 40 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.18126465143245 22.70681450901422 26.180866944687953 10.931053894865382 2 30.943825322716616 24.77124860312508 26.59453797399222 17.690388100166086 3 30.9687520130403 24.65949860942677 28.176962696787815 16.194786680745114 4 28.67353597705624 25.340641428159316 27.866359330844396 18.11946326394004 5 21.02160219802995 41.102992043064354 21.67977885264405 16.19562690626164 6 25.21180684895826 34.280640924024006 25.264460981327385 15.243091245690344 7 80.04884511002753 5.757225239254216 9.144174296381149 5.049755354337105 8 81.15206121322963 4.833257246244893 8.306189381229922 5.708492159295555 9 75.6222570137825 5.957198912188031 11.194044481538846 7.226499592490625 10 41.523945026845205 23.61677874341473 18.850459463319954 16.008816766420107 11 30.95838923166978 25.576464723131686 24.25871103804261 19.20643500715592 12 28.663453270857897 22.313869042450992 29.49779720877083 19.524880477920274 13 22.77123179861475 27.441205219480906 31.33705086445202 18.450512117452327 14 18.104059129470347 31.11607155360499 28.3349250938952 22.444944223029463 15 17.19381481989766 25.983694023475902 37.85019899340983 18.972292163216608 16 19.364957554607656 25.095855727677307 34.132201082770614 21.40698563494442 17 18.908435023960433 24.83174484031514 28.87350964999006 27.386310485734374 18 20.422521404745034 26.434615050679604 30.798466308357163 22.3443972362182 19 22.17579198256812 27.130881928709666 28.123468338902164 22.569857749820052 20 24.72671665074906 25.52885194386173 28.540780345444716 21.20365105994449 21 22.267936714214095 28.417547269687184 28.789487098337197 20.525028917761524 22 20.052822177472436 26.43433497550743 28.06157172585122 25.451271121168922 23 19.685923701921595 26.87629359720149 28.69370138945293 24.744081311423987 24 21.732993135357532 23.77502121569429 31.207095984562255 23.284889664385922 25 18.860822244690475 26.127652661974476 30.452293395547365 24.559231697787688 26 17.92425086893322 28.115066083736874 29.07152279671864 24.889160250611265 27 20.0214537581887 28.45087621517615 29.26533481586458 22.26233521077057 28 17.28175842396099 27.31993266992861 32.02827638938291 23.37003251672749 29 18.31691626032427 24.751643341072743 31.868353466070293 25.06308693253269 30 19.86069060935955 27.242911997580148 30.06971071035466 22.82668668270564 31 20.926656714662215 28.41334614210454 25.813968469137116 24.846028674096125 32 22.36512279895924 27.878962713592326 27.244872523785386 22.511041963663047 33 21.133632266900438 27.17513380591351 27.658823628261825 24.03241029892423 34 18.768397437872324 25.721263587146794 29.076564149817813 26.433774825163077 35 19.45486168487622 24.157883976059175 29.61430848039614 26.772945858668468 36 21.057451820068508 25.790442154674313 28.257624346374566 24.894481678882613 37 20.24439359524096 26.302699644584603 31.08022193156643 22.372684828607998 38 19.783109786666742 28.701263419101686 27.41711875467375 24.098508039557817 39 20.40207591717617 25.76859629124457 29.33031225580946 24.4990155357698 40 22.005506277884983 23.82179376944772 29.119135575988597 25.0535643766787 41 18.960529005985208 23.865765571479386 27.54875408559657 29.62495133693883 42 20.972589042899116 23.087436668001693 29.16814873111943 26.77182555797976 43 21.470002548684068 23.9562298520923 28.93344573683577 25.640321862387864 44 19.710570317073103 25.815648920170176 28.202169462283678 26.271611300473047 45 19.13641621411187 26.071917702711406 27.40143454503189 27.39023153814484 46 22.562015644999118 25.961288009701804 27.361663870582863 24.115032474716212 47 19.06387674451823 24.299041862835985 30.70100014843984 25.936081244205944 48 19.83576391903587 22.830607735116104 30.64358473814372 26.690043607704304 49 20.323094718622478 21.777805162905725 31.409030183701304 26.490069934770492 50 18.761115483395745 22.993331410150482 31.217458765932776 27.028094340520997 51 18.75831473167398 23.205628390660053 27.687111220651623 30.348945657014344 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 87.0 1 206.5 2 326.0 3 455.0 4 584.0 5 441.0 6 298.0 7 309.0 8 320.0 9 304.0 10 288.0 11 297.5 12 307.0 13 334.5 14 362.0 15 340.5 16 319.0 17 380.0 18 441.0 19 495.5 20 550.0 21 686.5 22 823.0 23 1108.0 24 1393.0 25 1813.5 26 2804.5 27 3375.0 28 3979.0 29 4583.0 30 5220.0 31 5857.0 32 6379.5 33 6902.0 34 8315.0 35 9728.0 36 10407.5 37 11087.0 38 12007.5 39 12928.0 40 15781.5 41 18635.0 42 21919.0 43 25203.0 44 28266.5 45 31330.0 46 35092.5 47 38855.0 48 40384.5 49 41914.0 50 40216.0 51 38518.0 52 32480.0 53 26442.0 54 22380.0 55 18318.0 56 15575.0 57 12832.0 58 12177.5 59 11523.0 60 10591.5 61 9660.0 62 8996.5 63 8333.0 64 6676.0 65 5019.0 66 4078.0 67 3137.0 68 2470.5 69 1804.0 70 1426.0 71 1048.0 72 861.0 73 674.0 74 603.5 75 372.5 76 212.0 77 171.0 78 130.0 79 101.5 80 73.0 81 51.5 82 30.0 83 22.5 84 15.0 85 11.0 86 7.0 87 5.5 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 357047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.17341979361335 #Duplication Level Percentage of deduplicated Percentage of total 1 67.15218079412224 19.590587603635477 2 13.137084772513754 7.665073778656585 3 5.398121873972304 4.724450265794424 4 2.91910985959852 3.406416694309734 5 1.7635887950178286 2.5724958130183917 6 1.2304089550439725 2.153714217799137 7 0.8408493871357259 1.7171316507879126 8 0.6236615909973741 1.4555473122655347 9 0.5080946969018902 1.3340573898864823 >10 5.802241726807333 42.06000690012638 >50 0.5848069866202266 10.28183234030931 >100 0.03387297707851398 1.6569630871806698 >500 0.004981320158604997 1.0140579216231111 >1k 9.962640317209995E-4 0.36766502460683165 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 1265 0.3542950928029083 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 793 0.2220996115357362 TruSeq Adapter, Index 13 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT 736 0.2061353267216921 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGC 728 0.2038947253442824 No Hit GAATCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTC 656 0.18372931294759512 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCG 576 0.16132329917349816 No Hit TCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 473 0.13247555643934833 TruSeq Adapter, Index 13 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26355073701781556 0.0 2 2.800751721762121E-4 0.0 0.0 1.3183138354334303 0.0 3 2.800751721762121E-4 0.0 0.0 1.7832386212459423 0.0 4 2.800751721762121E-4 0.0 0.0 2.3868006172856795 0.0 5 2.800751721762121E-4 0.0 0.0 4.184603147484785 0.0 6 2.800751721762121E-4 0.0 0.0 5.249729027270919 0.0 7 2.800751721762121E-4 0.0 0.0 6.378151895968878 0.0 8 2.800751721762121E-4 0.0 0.0 8.161390517214821 0.0 9 2.800751721762121E-4 0.0 0.0 8.766352889115439 0.0 10 2.800751721762121E-4 0.0 0.0 10.292202427131443 0.0 11 2.800751721762121E-4 0.0 0.0 12.109330144210706 0.0 12 2.800751721762121E-4 0.0 0.0 13.77045599038782 0.0 13 2.800751721762121E-4 0.0 0.0 14.382980391937195 0.0 14 2.800751721762121E-4 0.0 0.0 14.644850677921955 0.0 15 2.800751721762121E-4 0.0 0.0 15.134702154058148 0.0 16 2.800751721762121E-4 0.0 0.0 16.12616826356194 0.0 17 2.800751721762121E-4 0.0 0.0 17.294081731536746 0.0 18 2.800751721762121E-4 0.0 0.0 18.555540307018404 0.0 19 2.800751721762121E-4 0.0 0.0 19.254047786425875 0.0 20 2.800751721762121E-4 0.0 0.0 20.004369172685948 0.0 21 2.800751721762121E-4 0.0 0.0 20.896968746411538 0.0 22 2.800751721762121E-4 0.0 0.0 21.7839668166936 0.0 23 2.800751721762121E-4 0.0 0.0 22.665643458704317 0.0 24 5.601503443524242E-4 0.0 0.0 23.361350186390027 0.0 25 5.601503443524242E-4 0.0 0.0 24.031289998235525 0.0 26 5.601503443524242E-4 0.0 0.0 24.586118914316604 0.0 27 5.601503443524242E-4 0.0 0.0 25.13198542488804 0.0 28 5.601503443524242E-4 0.0 0.0 25.67393088304901 0.0 29 5.601503443524242E-4 0.0 0.0 26.24024288118931 0.0 30 5.601503443524242E-4 0.0 0.0 26.907101866140874 0.0 31 5.601503443524242E-4 0.0 0.0 27.527188297339006 0.0 32 5.601503443524242E-4 0.0 0.0 28.12430856441869 0.0 33 5.601503443524242E-4 0.0 0.0 28.678577330155413 0.0 34 5.601503443524242E-4 0.0 0.0 29.257492711043643 0.0 35 5.601503443524242E-4 0.0 0.0 29.845930647785867 0.0 36 5.601503443524242E-4 0.0 0.0 30.405240766621763 0.0 37 8.402255165286363E-4 0.0 0.0 30.981075320616053 0.0 38 8.402255165286363E-4 0.0 0.0 31.490251983632408 0.0 39 8.402255165286363E-4 0.0 0.0 32.036958719720374 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCT 40 6.7921064E-9 45.0 20 CGGGTAT 20 7.026747E-4 45.0 6 CGGGTAC 35 1.2087912E-7 45.0 6 GGGCTTA 40 6.7921064E-9 45.0 7 GTACAAG 40 6.7921064E-9 45.0 1 ACGTTGA 20 7.026747E-4 45.0 32 TAGACGG 20 7.026747E-4 45.0 2 GCGCGAC 35 1.2087912E-7 45.0 9 GTTTACG 25 3.8853846E-5 45.0 1 TAGCGTG 25 3.8853846E-5 45.0 1 CGTTGCA 20 7.026747E-4 45.0 16 CGACCTC 35 1.2087912E-7 45.0 12 TAAACGG 20 7.026747E-4 45.0 2 ACCGAAT 25 3.8853846E-5 45.0 34 TCGGGCA 35 1.2087912E-7 45.0 5 CCAGCGG 25 3.8853846E-5 45.0 2 TCCTCCG 20 7.026747E-4 45.0 34 CGCGACC 35 1.2087912E-7 45.0 10 CGTTATT 35 1.2087912E-7 45.0 1 GTTACCG 20 7.026747E-4 45.0 21 >>END_MODULE